10 20 30 40 50 60 70 80 1NA3 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER DE NOVO PROTEIN 26-NOV-02 1NA3
TITLE DESIGN OF STABLE ALPHA-HELICAL ARRAYS FROM AN IDEALIZED TPR TITLE 2 MOTIF
COMPND MOL_ID: 1; COMPND 2 MOLECULE: DESIGNED PROTEIN CTPR2; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: UNIDENTIFIED; SOURCE 3 ORGANISM_TAXID: 32644; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562
KEYWDS DESIGN, TPR, DE NOVO PROTEIN
EXPDTA X-RAY DIFFRACTION
AUTHOR E.MAIN,Y.XIONG,M.COCCO,L.D'ANDREA,L.REGAN
REVDAT 2 24-FEB-09 1NA3 1 VERSN REVDAT 1 03-JUN-03 1NA3 0
JRNL AUTH E.MAIN,Y.XIONG,M.COCCO,L.D'ANDREA,L.REGAN JRNL TITL DESIGN OF STABLE ALPHA-HELICAL ARRAYS FROM AN JRNL TITL 2 IDEALIZED TPR MOTIF JRNL REF STRUCTURE V. 11 497 2003 JRNL REFN ISSN 0969-2126 JRNL PMID 12737816 JRNL DOI 10.1016/S0969-2126(03)00076-5
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. 1.55 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.24 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.71 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 22285 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.181 REMARK 3 R VALUE (WORKING SET) : 0.178 REMARK 3 FREE R VALUE : 0.207 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.700 REMARK 3 FREE R VALUE TEST SET COUNT : 2396 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.55 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.63 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3182 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2360 REMARK 3 BIN FREE R VALUE SET COUNT : 333 REMARK 3 BIN FREE R VALUE : 0.2720 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1402 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 30 REMARK 3 SOLVENT ATOMS : 90 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 12.88 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.58000 REMARK 3 B22 (A**2) : 0.31000 REMARK 3 B33 (A**2) : -0.89000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.088 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.087 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.069 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.919 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.966 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.954 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1462 ; 0.017 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 1134 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1980 ; 1.511 ; 1.955 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2683 ; 0.881 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 170 ; 4.712 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 184 ; 0.122 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1704 ; 0.011 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 282 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 334 ; 0.229 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1227 ; 0.238 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): 737 ; 0.089 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 58 ; 0.195 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 6 ; 0.171 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 44 ; 0.280 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 10 ; 0.095 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 854 ; 0.903 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1326 ; 1.700 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 608 ; 3.055 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 654 ; 4.872 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 34 REMARK 3 ORIGIN FOR THE GROUP (A): 20.4720 21.7320 0.4100 REMARK 3 T TENSOR REMARK 3 T11: 0.0742 T22: 0.0463 REMARK 3 T33: 0.0273 T12: -0.0004 REMARK 3 T13: -0.0139 T23: 0.0015 REMARK 3 L TENSOR REMARK 3 L11: 2.6308 L22: 4.6323 REMARK 3 L33: 3.7660 L12: 1.2992 REMARK 3 L13: -0.0360 L23: 0.0255 REMARK 3 S TENSOR REMARK 3 S11: 0.0583 S12: 0.0244 S13: -0.0652 REMARK 3 S21: -0.0526 S22: -0.0353 S23: 0.0420 REMARK 3 S31: 0.1496 S32: -0.0273 S33: -0.0230 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 35 A 66 REMARK 3 ORIGIN FOR THE GROUP (A): 19.3670 21.2970 12.9720 REMARK 3 T TENSOR REMARK 3 T11: 0.1046 T22: 0.0445 REMARK 3 T33: 0.0430 T12: 0.0092 REMARK 3 T13: -0.0006 T23: -0.0037 REMARK 3 L TENSOR REMARK 3 L11: 1.1791 L22: 7.6005 REMARK 3 L33: 2.5766 L12: -0.8104 REMARK 3 L13: 0.0804 L23: -0.4523 REMARK 3 S TENSOR REMARK 3 S11: -0.1095 S12: -0.1400 S13: -0.0534 REMARK 3 S21: 0.3344 S22: 0.0920 S23: 0.1938 REMARK 3 S31: -0.0757 S32: -0.1571 S33: 0.0176 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 67 A 86 REMARK 3 ORIGIN FOR THE GROUP (A): 24.1470 20.6500 20.1800 REMARK 3 T TENSOR REMARK 3 T11: 0.2679 T22: 0.0986 REMARK 3 T33: 0.0824 T12: 0.0384 REMARK 3 T13: -0.0463 T23: -0.0185 REMARK 3 L TENSOR REMARK 3 L11: 2.7624 L22: 12.9080 REMARK 3 L33: 2.3423 L12: -2.5659 REMARK 3 L13: 0.6876 L23: -0.3958 REMARK 3 S TENSOR REMARK 3 S11: -0.3955 S12: -0.3109 S13: 0.3502 REMARK 3 S21: 1.1211 S22: 0.2708 S23: -0.2288 REMARK 3 S31: -0.4045 S32: -0.0869 S33: 0.1247 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 34 REMARK 3 ORIGIN FOR THE GROUP (A): 23.7490 47.7360 46.6330 REMARK 3 T TENSOR REMARK 3 T11: 0.0900 T22: 0.0494 REMARK 3 T33: 0.0274 T12: -0.0209 REMARK 3 T13: 0.0177 T23: 0.0041 REMARK 3 L TENSOR REMARK 3 L11: 3.4217 L22: 4.0909 REMARK 3 L33: 2.9278 L12: -1.2781 REMARK 3 L13: -0.2000 L23: -0.4454 REMARK 3 S TENSOR REMARK 3 S11: -0.0140 S12: -0.1113 S13: -0.0246 REMARK 3 S21: -0.0402 S22: 0.0060 S23: 0.1213 REMARK 3 S31: -0.0397 S32: -0.0252 S33: 0.0080 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 35 B 66 REMARK 3 ORIGIN FOR THE GROUP (A): 21.3710 48.0970 58.9720 REMARK 3 T TENSOR REMARK 3 T11: 0.1246 T22: 0.0936 REMARK 3 T33: 0.0648 T12: -0.0509 REMARK 3 T13: 0.0157 T23: -0.0137 REMARK 3 L TENSOR REMARK 3 L11: 3.2708 L22: 3.8875 REMARK 3 L33: 3.5479 L12: -1.9548 REMARK 3 L13: -0.1274 L23: -0.9731 REMARK 3 S TENSOR REMARK 3 S11: 0.0488 S12: -0.1084 S13: 0.1569 REMARK 3 S21: 0.2757 S22: -0.1433 S23: -0.0586 REMARK 3 S31: -0.1992 S32: -0.0134 S33: 0.0946 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 67 B 86 REMARK 3 ORIGIN FOR THE GROUP (A): 16.6000 43.9370 64.9720 REMARK 3 T TENSOR REMARK 3 T11: 0.1689 T22: 0.1545 REMARK 3 T33: 0.0795 T12: -0.0144 REMARK 3 T13: 0.0543 T23: 0.0023 REMARK 3 L TENSOR REMARK 3 L11: 8.6059 L22: 4.2410 REMARK 3 L33: -0.0248 L12: -3.8248 REMARK 3 L13: 1.0772 L23: -0.3439 REMARK 3 S TENSOR REMARK 3 S11: 0.0142 S12: -0.5110 S13: -0.2080 REMARK 3 S21: 0.2361 S22: 0.0727 S23: 0.0654 REMARK 3 S31: -0.0867 S32: -0.1118 S33: -0.0869 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS
REMARK 4 REMARK 4 1NA3 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-DEC-02. REMARK 100 THE RCSB ID CODE IS RCSB017707.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X25 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.100 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22285 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.550 REMARK 200 RESOLUTION RANGE LOW (A) : 34.700 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.600 REMARK 200 R MERGE (I) : 0.04200 REMARK 200 R SYM (I) : 0.04200 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 43.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.61 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.86000 REMARK 200 R SYM FOR SHELL (I) : 0.86000 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38.41 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.00 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: TRIS, PEG 4000, MGCL2, IPTG, NACL, REMARK 280 PH 8., VAPOR DIFFUSION, HANGING DROP AT 277K
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 22.49300 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 33.46900 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 27.47050 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 33.46900 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 22.49300 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 27.47050 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -4 REMARK 465 ALA A -3 REMARK 465 MET A -2 REMARK 465 ASP A -1 REMARK 465 PRO A 0 REMARK 465 GLY B -4 REMARK 465 ALA B -3 REMARK 465 MET B -2 REMARK 465 ASP B -1 REMARK 465 PRO B 0
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 55 CB - CG - OD2 ANGL. DEV. = 7.2 DEGREES REMARK 500 ASP B 55 CB - CG - OD2 ANGL. DEV. = 7.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 19 74.63 -104.42 REMARK 500 REMARK 500 REMARK: NULL
REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 IPT A 201
REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 301 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 328 O REMARK 620 2 HOH B 308 O 90.8 REMARK 620 3 HOH B 310 O 87.4 89.1 REMARK 620 4 HOH B 311 O 90.6 88.8 177.2 REMARK 620 5 HOH B 312 O 89.1 177.2 88.1 94.0 REMARK 620 6 HOH B 319 O 178.2 88.1 91.1 90.8 91.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 336 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 309 O REMARK 620 2 HOH B 324 O 92.7 REMARK 620 3 HOH B 306 O 92.5 86.1 REMARK 620 4 HOH B 313 O 174.0 92.9 85.8 REMARK 620 5 HOH B 300 O 92.2 85.6 170.6 90.3 REMARK 620 6 HOH A 305 O 86.2 177.7 95.9 88.3 92.5 REMARK 620 N 1 2 3 4 5
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 301 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 336 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TRS A 101 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IPT B 151 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IPT A 201
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1NA0 RELATED DB: PDB REMARK 900 CTPR3
DBREF 1NA3 A -4 86 PDB 1NA3 1NA3 -4 86 DBREF 1NA3 B -4 86 PDB 1NA3 1NA3 -4 86
SEQRES 1 A 91 GLY ALA MET ASP PRO GLY ASN SER ALA GLU ALA TRP TYR SEQRES 2 A 91 ASN LEU GLY ASN ALA TYR TYR LYS GLN GLY ASP TYR ASP SEQRES 3 A 91 GLU ALA ILE GLU TYR TYR GLN LYS ALA LEU GLU LEU ASP SEQRES 4 A 91 PRO ASN ASN ALA GLU ALA TRP TYR ASN LEU GLY ASN ALA SEQRES 5 A 91 TYR TYR LYS GLN GLY ASP TYR ASP GLU ALA ILE GLU TYR SEQRES 6 A 91 TYR GLN LYS ALA LEU GLU LEU ASP PRO ASN ASN ALA GLU SEQRES 7 A 91 ALA LYS GLN ASN LEU GLY ASN ALA LYS GLN LYS GLN GLY SEQRES 1 B 91 GLY ALA MET ASP PRO GLY ASN SER ALA GLU ALA TRP TYR SEQRES 2 B 91 ASN LEU GLY ASN ALA TYR TYR LYS GLN GLY ASP TYR ASP SEQRES 3 B 91 GLU ALA ILE GLU TYR TYR GLN LYS ALA LEU GLU LEU ASP SEQRES 4 B 91 PRO ASN ASN ALA GLU ALA TRP TYR ASN LEU GLY ASN ALA SEQRES 5 B 91 TYR TYR LYS GLN GLY ASP TYR ASP GLU ALA ILE GLU TYR SEQRES 6 B 91 TYR GLN LYS ALA LEU GLU LEU ASP PRO ASN ASN ALA GLU SEQRES 7 B 91 ALA LYS GLN ASN LEU GLY ASN ALA LYS GLN LYS GLN GLY
HET MG B 301 1 HET MG B 336 1 HET TRS A 101 8 HET IPT B 151 15 HET IPT A 201 5
HETNAM MG MAGNESIUM ION HETNAM TRS 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL HETNAM IPT ISOPROPYL-1-BETA-D-THIOGALACTOSIDE
HETSYN TRS TRIS BUFFER HETSYN IPT 1-(ISOPROPYLTHIO)-BETA-GALACTOPYRANSIDE
FORMUL 3 MG 2(MG 2+) FORMUL 5 TRS C4 H12 N O3 1+ FORMUL 6 IPT 2(C9 H18 O5 S) FORMUL 8 HOH *90(H2 O)
HELIX 1 1 GLY A 1 GLN A 17 1 17 HELIX 2 2 ASP A 19 ASP A 34 1 16 HELIX 3 3 ASN A 37 GLN A 51 1 15 HELIX 4 4 ASP A 53 ASP A 68 1 16 HELIX 5 5 ASN A 71 GLY A 86 1 16 HELIX 6 6 GLY B 1 GLY B 18 1 18 HELIX 7 7 ASP B 19 ASP B 34 1 16 HELIX 8 8 ASN B 37 GLN B 51 1 15 HELIX 9 9 ASP B 53 ASP B 68 1 16 HELIX 10 10 ASN B 71 GLY B 86 1 16
LINK MG MG B 301 O HOH B 328 1555 1555 2.25 LINK MG MG B 301 O HOH B 308 1555 1555 2.13 LINK MG MG B 301 O HOH B 310 1555 1555 2.11 LINK MG MG B 301 O HOH B 311 1555 1555 2.06 LINK MG MG B 301 O HOH B 312 1555 1555 2.11 LINK MG MG B 301 O HOH B 319 1555 1555 2.04 LINK MG MG B 336 O HOH B 309 1555 1555 2.13 LINK MG MG B 336 O HOH B 324 1555 1555 2.10 LINK MG MG B 336 O HOH B 306 1555 1555 2.04 LINK MG MG B 336 O HOH B 313 1555 1555 2.07 LINK MG MG B 336 O HOH B 300 1555 1555 2.06 LINK MG MG B 336 O HOH A 305 1555 2665 2.05
SITE 1 AC1 6 HOH B 308 HOH B 310 HOH B 311 HOH B 312 SITE 2 AC1 6 HOH B 319 HOH B 328 SITE 1 AC2 6 HOH A 305 HOH B 300 HOH B 306 HOH B 309 SITE 2 AC2 6 HOH B 313 HOH B 324 SITE 1 AC3 6 GLU A 39 ASN A 71 ALA A 72 GLU A 73 SITE 2 AC3 6 HOH A 340 HOH B 309 SITE 1 AC4 10 TYR A 14 GLN A 17 HOH A 315 HOH A 373 SITE 2 AC4 10 SER B 3 ASN B 46 TYR B 49 LYS B 50 SITE 3 AC4 10 ASN B 77 HOH B 359 SITE 1 AC5 5 TYR A 15 ASN A 46 TYR A 49 LYS A 50 SITE 2 AC5 5 ASN A 77
CRYST1 44.986 54.941 66.938 90.00 90.00 90.00 P 21 21 21 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.022229 0.000000 0.000000 0.00000
SCALE2 0.000000 0.018201 0.000000 0.00000
SCALE3 0.000000 0.000000 0.014939 0.00000