10 20 30 40 50 60 70 80 1NA2 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER RNA 26-NOV-02 1NA2
TITLE SOLUTION STRUCTURE OF THE P2B HAIRPIN FROM HUMAN TELOMERASE TITLE 2 RNA
COMPND MOL_ID: 1; COMPND 2 MOLECULE: TELOMERASE RNA P2B HAIRPIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 OTHER_DETAILS: THIS SEQUENCE OCCURS NATURALLY IN HOMO SOURCE 4 SAPIENS (HUMAN).
KEYWDS U-U BASE PAIR, U-C BASE PAIR, PENTALOOP, HAIRPIN, RNA, NMR, KEYWDS 2 TELOMERASE, NARROW MINOR GROOVE, U TRACTS
EXPDTA SOLUTION NMR
NUMMDL 18
AUTHOR C.A.THEIMER,L.D.FINGER,L.TRANTIREK,J.FEIGON
REVDAT 3 24-FEB-09 1NA2 1 VERSN REVDAT 2 04-FEB-03 1NA2 1 JRNL REVDAT 1 21-JAN-03 1NA2 0
JRNL AUTH C.A.THEIMER,L.D.FINGER,L.TRANTIREK,J.FEIGON JRNL TITL MUTATIONS LINKED TO DYSKERATOSIS CONGENITA CAUSE JRNL TITL 2 CHANGES IN THE STRUCTURAL EQUILIBRIUM IN JRNL TITL 3 TELOMERASE RNA JRNL REF PROC.NATL.ACAD.SCI.USA V. 100 449 2003 JRNL REFN ISSN 0027-8424 JRNL PMID 12525685 JRNL DOI 10.1073/PNAS.242720799
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.851 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 266 INTRANUCLEOTIDE NOES, 318 REMARK 3 INTERNUCLEOTIDE NOES, 117 DIHEDRAL ANGLES, 29 HYDROGEN BONDS, REMARK 3 24 RDCS
REMARK 4 REMARK 4 1NA2 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-NOV-02. REMARK 100 THE RCSB ID CODE IS RCSB017706.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 278; 293 REMARK 210 PH : 6.3; 6.3 REMARK 210 IONIC STRENGTH : 200 MM KCL; 200 MM KCL REMARK 210 PRESSURE : 1 ATM; 1 ATM REMARK 210 SAMPLE CONTENTS : 1MM HUMAN TELOMERASE RNA P2B REMARK 210 HAIRPIN U-15N,13C LABELED, REMARK 210 UNLABELED.; 1MM HUMAN REMARK 210 TELOMERASE RNA P2B HAIRPIN U- REMARK 210 15N,13C LABELED, UNLABELED. REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D NOESY, DQF-COSY, 3D_13C- REMARK 210 SEPARATED_NOESY, 3D 13C NOESY- REMARK 210 HMQC REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ, 500 MHZ REMARK 210 SPECTROMETER MODEL : DRX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 2.6, AURELIA 3.108, X REMARK 210 -PLOR 3.851 REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 18 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH ACCEPTABLE REMARK 210 COVALENT GEOMETRY,STRUCTURES REMARK 210 WITH THE LEAST RESTRAINT REMARK 210 VIOLATIONS,STRUCTURES WITH THE REMARK 210 LOWEST ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 1 G A 1 N7 - C8 - N9 ANGL. DEV. = 4.5 DEGREES REMARK 500 1 G A 1 C8 - N9 - C4 ANGL. DEV. = -2.8 DEGREES REMARK 500 1 G A 2 N7 - C8 - N9 ANGL. DEV. = 4.6 DEGREES REMARK 500 1 G A 3 N7 - C8 - N9 ANGL. DEV. = 4.7 DEGREES REMARK 500 1 G A 3 C8 - N9 - C4 ANGL. DEV. = -2.6 DEGREES REMARK 500 1 G A 6 N7 - C8 - N9 ANGL. DEV. = 4.5 DEGREES REMARK 500 1 G A 6 C8 - N9 - C4 ANGL. DEV. = -2.7 DEGREES REMARK 500 1 U A 13 O4' - C1' - N1 ANGL. DEV. = 4.3 DEGREES REMARK 500 1 G A 15 N7 - C8 - N9 ANGL. DEV. = 4.8 DEGREES REMARK 500 1 G A 15 C8 - N9 - C4 ANGL. DEV. = -2.7 DEGREES REMARK 500 1 G A 18 N7 - C8 - N9 ANGL. DEV. = 5.0 DEGREES REMARK 500 1 G A 18 C8 - N9 - C4 ANGL. DEV. = -2.8 DEGREES REMARK 500 1 A A 19 N7 - C8 - N9 ANGL. DEV. = 4.0 DEGREES REMARK 500 1 A A 25 N7 - C8 - N9 ANGL. DEV. = 3.9 DEGREES REMARK 500 1 G A 26 N7 - C8 - N9 ANGL. DEV. = 5.1 DEGREES REMARK 500 1 G A 26 C8 - N9 - C4 ANGL. DEV. = -2.6 DEGREES REMARK 500 2 G A 1 N7 - C8 - N9 ANGL. DEV. = 4.6 DEGREES REMARK 500 2 G A 1 C8 - N9 - C4 ANGL. DEV. = -2.7 DEGREES REMARK 500 2 G A 2 N7 - C8 - N9 ANGL. DEV. = 4.7 DEGREES REMARK 500 2 G A 3 N7 - C8 - N9 ANGL. DEV. = 4.5 DEGREES REMARK 500 2 G A 3 C8 - N9 - C4 ANGL. DEV. = -2.5 DEGREES REMARK 500 2 G A 6 N7 - C8 - N9 ANGL. DEV. = 4.6 DEGREES REMARK 500 2 G A 6 C8 - N9 - C4 ANGL. DEV. = -2.7 DEGREES REMARK 500 2 G A 15 N7 - C8 - N9 ANGL. DEV. = 4.7 DEGREES REMARK 500 2 G A 15 C8 - N9 - C4 ANGL. DEV. = -2.7 DEGREES REMARK 500 2 G A 18 N7 - C8 - N9 ANGL. DEV. = 5.0 DEGREES REMARK 500 2 G A 18 C8 - N9 - C4 ANGL. DEV. = -2.9 DEGREES REMARK 500 2 A A 19 N7 - C8 - N9 ANGL. DEV. = 4.0 DEGREES REMARK 500 2 A A 25 N7 - C8 - N9 ANGL. DEV. = 3.8 DEGREES REMARK 500 2 G A 26 N7 - C8 - N9 ANGL. DEV. = 5.1 DEGREES REMARK 500 2 G A 26 C8 - N9 - C4 ANGL. DEV. = -2.7 DEGREES REMARK 500 3 G A 1 N7 - C8 - N9 ANGL. DEV. = 4.5 DEGREES REMARK 500 3 G A 1 C8 - N9 - C4 ANGL. DEV. = -2.6 DEGREES REMARK 500 3 G A 2 N7 - C8 - N9 ANGL. DEV. = 4.7 DEGREES REMARK 500 3 G A 3 N7 - C8 - N9 ANGL. DEV. = 4.6 DEGREES REMARK 500 3 G A 3 C8 - N9 - C4 ANGL. DEV. = -2.5 DEGREES REMARK 500 3 G A 6 N7 - C8 - N9 ANGL. DEV. = 4.5 DEGREES REMARK 500 3 G A 6 C8 - N9 - C4 ANGL. DEV. = -2.7 DEGREES REMARK 500 3 G A 15 N7 - C8 - N9 ANGL. DEV. = 4.7 DEGREES REMARK 500 3 G A 15 C8 - N9 - C4 ANGL. DEV. = -2.7 DEGREES REMARK 500 3 G A 18 N7 - C8 - N9 ANGL. DEV. = 5.0 DEGREES REMARK 500 3 G A 18 C8 - N9 - C4 ANGL. DEV. = -2.8 DEGREES REMARK 500 3 A A 19 N7 - C8 - N9 ANGL. DEV. = 4.0 DEGREES REMARK 500 3 A A 25 N7 - C8 - N9 ANGL. DEV. = 3.7 DEGREES REMARK 500 3 G A 26 N7 - C8 - N9 ANGL. DEV. = 5.1 DEGREES REMARK 500 3 G A 26 C8 - N9 - C4 ANGL. DEV. = -2.7 DEGREES REMARK 500 4 G A 1 N7 - C8 - N9 ANGL. DEV. = 4.6 DEGREES REMARK 500 4 G A 1 C8 - N9 - C4 ANGL. DEV. = -2.8 DEGREES REMARK 500 4 G A 2 N7 - C8 - N9 ANGL. DEV. = 4.6 DEGREES REMARK 500 4 G A 2 C8 - N9 - C4 ANGL. DEV. = -2.4 DEGREES REMARK 500 REMARK 500 THIS ENTRY HAS 279 ANGLE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL
DBREF 1NA2 A 1 30 PDB 1NA2 1NA2 1 30
SEQRES 1 A 30 G G G C U G U U U U U C U SEQRES 2 A 30 C G C U G A C U U U C A G SEQRES 3 A 30 C C C C
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000