10 20 30 40 50 60 70 80 1N7G - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER LYASE 14-NOV-02 1N7G
TITLE CRYSTAL STRUCTURE OF THE GDP-MANNOSE 4,6-DEHYDRATASE TITLE 2 TERNARY COMPLEX WITH NADPH AND GDP-RHAMNOSE.
COMPND MOL_ID: 1; COMPND 2 MOLECULE: GDP-D-MANNOSE-4,6-DEHYDRATASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 EC: 4.2.1.47; COMPND 5 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 3 ORGANISM_COMMON: THALE CRESS; SOURCE 4 ORGANISM_TAXID: 3702; SOURCE 5 GENE: MUR1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28B
KEYWDS ROSSMANN FOLD, SDR, SHORT-CHAIN DEHYDROGENASE/REDUCTASE, KEYWDS 2 LYASE
EXPDTA X-RAY DIFFRACTION
AUTHOR A.M.MULICHAK,C.P.BONIN,W.-D.REITER,R.M.GARAVITO
REVDAT 2 24-FEB-09 1N7G 1 VERSN REVDAT 1 07-JAN-03 1N7G 0
JRNL AUTH A.M.MULICHAK,C.P.BONIN,W.-D.REITER,R.M.GARAVITO JRNL TITL THE STRUCTURE OF THE MUR1 GDP-MANNOSE JRNL TITL 2 4,6-DEHYDRATASE FROM A. THALIANA: IMPLICATIONS FOR JRNL TITL 3 LIGAND BINDING AND SPECIFICITY. JRNL REF BIOCHEMISTRY V. 41 15557 2002 JRNL REFN ISSN 0006-2960 JRNL PMID 12501186 JRNL DOI 10.1021/BI0266683
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 0.9 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 72041 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.201 REMARK 3 FREE R VALUE : 0.247 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 3521 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 10253 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 306 REMARK 3 SOLVENT ATOMS : 475 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.26 REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.005 REMARK 3 BOND ANGLES (DEGREES) : 1.15 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 22.77 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.84 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: MISSING SIDE CHAIN ATOMS FOR REMARK 3 RESIDUES LISTED IN REMARK 470 WERE UNOBSERVED AND WERE NOT REMARK 3 REFINED.
REMARK 4 REMARK 4 1N7G COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-NOV-02. REMARK 100 THE RCSB ID CODE IS RCSB017613.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JAN-01 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 5ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 72438 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.03800 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.30 REMARK 200 COMPLETENESS FOR SHELL (%) : 78.5 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.20200 REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.03 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.32 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: AMMONIUM SULFATE, PEG 400, REMARK 280 IMIDAZOLE BUFFER, PH 6.4, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 298K
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 56.59000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 59.44500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 59.50500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 59.44500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 56.59000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 59.50500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS THE HOMOTETRAMER REMARK 300 OBSERVED IN THE ASYMMETRIC UNIT.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 21230 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 41890 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -60.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 SER A 3 REMARK 465 GLU A 4 REMARK 465 ASN A 5 REMARK 465 ASN A 6 REMARK 465 GLY A 7 REMARK 465 SER A 8 REMARK 465 ARG A 9 REMARK 465 SER A 10 REMARK 465 ASP A 11 REMARK 465 SER A 12 REMARK 465 GLU A 13 REMARK 465 SER A 14 REMARK 465 ILE A 15 REMARK 465 THR A 16 REMARK 465 ALA A 17 REMARK 465 PRO A 18 REMARK 465 LYS A 19 REMARK 465 ALA A 20 REMARK 465 ASP A 21 REMARK 465 SER A 22 REMARK 465 THR A 23 REMARK 465 VAL A 24 REMARK 465 VAL A 25 REMARK 465 GLU A 26 REMARK 465 PRO A 27 REMARK 465 ILE A 75 REMARK 465 ASP A 76 REMARK 465 PRO A 77 REMARK 465 HIS A 78 REMARK 465 ASN A 79 REMARK 465 VAL A 80 REMARK 465 ASN A 81 REMARK 465 ASP A 368 REMARK 465 ALA A 369 REMARK 465 LYS A 370 REMARK 465 GLN A 371 REMARK 465 GLN A 372 REMARK 465 PRO A 373 REMARK 465 LEU A 374 REMARK 465 GLU A 375 REMARK 465 HIS A 376 REMARK 465 HIS A 377 REMARK 465 HIS A 378 REMARK 465 HIS A 379 REMARK 465 HIS A 380 REMARK 465 HIS A 381 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 SER B 3 REMARK 465 GLU B 4 REMARK 465 ASN B 5 REMARK 465 ASN B 6 REMARK 465 GLY B 7 REMARK 465 SER B 8 REMARK 465 ARG B 9 REMARK 465 SER B 10 REMARK 465 ASP B 11 REMARK 465 SER B 12 REMARK 465 GLU B 13 REMARK 465 SER B 14 REMARK 465 ILE B 15 REMARK 465 THR B 16 REMARK 465 ALA B 17 REMARK 465 PRO B 18 REMARK 465 LYS B 19 REMARK 465 ALA B 20 REMARK 465 ASP B 21 REMARK 465 SER B 22 REMARK 465 THR B 23 REMARK 465 VAL B 24 REMARK 465 VAL B 25 REMARK 465 GLU B 26 REMARK 465 PRO B 27 REMARK 465 PRO B 77 REMARK 465 HIS B 78 REMARK 465 ASN B 79 REMARK 465 VAL B 80 REMARK 465 ASN B 81 REMARK 465 ALA B 369 REMARK 465 LYS B 370 REMARK 465 GLN B 371 REMARK 465 GLN B 372 REMARK 465 PRO B 373 REMARK 465 LEU B 374 REMARK 465 GLU B 375 REMARK 465 HIS B 376 REMARK 465 HIS B 377 REMARK 465 HIS B 378 REMARK 465 HIS B 379 REMARK 465 HIS B 380 REMARK 465 HIS B 381 REMARK 465 MET C 1 REMARK 465 ALA C 2 REMARK 465 SER C 3 REMARK 465 GLU C 4 REMARK 465 ASN C 5 REMARK 465 ASN C 6 REMARK 465 GLY C 7 REMARK 465 SER C 8 REMARK 465 ARG C 9 REMARK 465 SER C 10 REMARK 465 ASP C 11 REMARK 465 SER C 12 REMARK 465 GLU C 13 REMARK 465 SER C 14 REMARK 465 ILE C 15 REMARK 465 THR C 16 REMARK 465 ALA C 17 REMARK 465 PRO C 18 REMARK 465 LYS C 19 REMARK 465 ALA C 20 REMARK 465 ASP C 21 REMARK 465 SER C 22 REMARK 465 THR C 23 REMARK 465 VAL C 24 REMARK 465 VAL C 25 REMARK 465 GLU C 26 REMARK 465 PRO C 27 REMARK 465 ASP C 76 REMARK 465 PRO C 77 REMARK 465 HIS C 78 REMARK 465 ASN C 79 REMARK 465 VAL C 80 REMARK 465 ASN C 81 REMARK 465 ASP C 368 REMARK 465 ALA C 369 REMARK 465 LYS C 370 REMARK 465 GLN C 371 REMARK 465 GLN C 372 REMARK 465 PRO C 373 REMARK 465 LEU C 374 REMARK 465 GLU C 375 REMARK 465 HIS C 376 REMARK 465 HIS C 377 REMARK 465 HIS C 378 REMARK 465 HIS C 379 REMARK 465 HIS C 380 REMARK 465 HIS C 381 REMARK 465 MET D 1 REMARK 465 ALA D 2 REMARK 465 SER D 3 REMARK 465 GLU D 4 REMARK 465 ASN D 5 REMARK 465 ASN D 6 REMARK 465 GLY D 7 REMARK 465 SER D 8 REMARK 465 ARG D 9 REMARK 465 SER D 10 REMARK 465 ASP D 11 REMARK 465 SER D 12 REMARK 465 GLU D 13 REMARK 465 SER D 14 REMARK 465 ILE D 15 REMARK 465 THR D 16 REMARK 465 ALA D 17 REMARK 465 PRO D 18 REMARK 465 LYS D 19 REMARK 465 ALA D 20 REMARK 465 ASP D 21 REMARK 465 SER D 22 REMARK 465 THR D 23 REMARK 465 VAL D 24 REMARK 465 VAL D 25 REMARK 465 GLU D 26 REMARK 465 PRO D 27 REMARK 465 ASP D 76 REMARK 465 PRO D 77 REMARK 465 HIS D 78 REMARK 465 ASN D 79 REMARK 465 VAL D 80 REMARK 465 ASN D 81 REMARK 465 LYS D 82 REMARK 465 ALA D 83 REMARK 465 LEU D 246 REMARK 465 GLY D 247 REMARK 465 ASN D 248 REMARK 465 LEU D 249 REMARK 465 GLN D 250 REMARK 465 GLN D 310 REMARK 465 ARG D 311 REMARK 465 TYR D 312 REMARK 465 PHE D 313 REMARK 465 ARG D 314 REMARK 465 PRO D 315 REMARK 465 ALA D 316 REMARK 465 GLU D 317 REMARK 465 VAL D 318 REMARK 465 ASP D 363 REMARK 465 ALA D 364 REMARK 465 GLY D 365 REMARK 465 TYR D 366 REMARK 465 MET D 367 REMARK 465 ASP D 368 REMARK 465 ALA D 369 REMARK 465 LYS D 370 REMARK 465 GLN D 371 REMARK 465 GLN D 372 REMARK 465 PRO D 373 REMARK 465 LEU D 374 REMARK 465 GLU D 375 REMARK 465 HIS D 376 REMARK 465 HIS D 377 REMARK 465 HIS D 378 REMARK 465 HIS D 379 REMARK 465 HIS D 380 REMARK 465 HIS D 381
REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS(M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 82 CG CD CE NZ REMARK 470 LYS A 86 CG CD CE NZ REMARK 470 LYS A 106 CG CD CE NZ REMARK 470 LYS A 243 CG CD CE NZ REMARK 470 GLU A 263 CG CD OE1 OE2 REMARK 470 GLU A 272 CG CD OE1 OE2 REMARK 470 GLU A 283 CG CD OE1 OE2 REMARK 470 GLN A 310 CG CD OE1 NE2 REMARK 470 GLU A 330 CG CD OE1 OE2 REMARK 470 LYS A 335 CG CD CE NZ REMARK 470 ILE B 75 CG1 CG2 CD1 REMARK 470 ASP B 76 CG OD1 OD2 REMARK 470 LYS B 82 CG CD CE NZ REMARK 470 LYS B 86 CG CD CE NZ REMARK 470 LYS B 243 CG CD CE NZ REMARK 470 GLU B 263 CG CD OE1 OE2 REMARK 470 GLU B 272 CG CD OE1 OE2 REMARK 470 LYS B 303 CG CD CE NZ REMARK 470 GLN B 310 CG CD OE1 NE2 REMARK 470 ARG B 311 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 329 CG CD CE NZ REMARK 470 GLU B 330 CG CD OE1 OE2 REMARK 470 LYS B 335 CG CD CE NZ REMARK 470 GLN B 337 CG CD OE1 NE2 REMARK 470 GLU B 341 CG CD OE1 OE2 REMARK 470 ASP B 368 CG OD1 OD2 REMARK 470 ILE C 75 CG1 CG2 CD1 REMARK 470 LYS C 82 CG CD CE NZ REMARK 470 LYS C 243 CG CD CE NZ REMARK 470 GLU C 263 CG CD OE1 OE2 REMARK 470 GLU C 272 CG CD OE1 OE2 REMARK 470 LYS C 273 CG CD CE NZ REMARK 470 GLN C 310 CG CD OE1 NE2 REMARK 470 ARG C 311 CG CD NE CZ NH1 NH2 REMARK 470 LYS C 329 CG CD CE NZ REMARK 470 GLU C 330 CG CD OE1 OE2 REMARK 470 LYS C 335 CG CD CE NZ REMARK 470 GLN C 337 CG CD OE1 NE2 REMARK 470 LYS C 356 CG CD CE NZ REMARK 470 TYR D 74 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ILE D 75 CG1 CG2 CD1 REMARK 470 ARG D 235 CG CD NE CZ NH1 NH2 REMARK 470 LYS D 237 CG CD CE NZ REMARK 470 VAL D 238 CG1 CG2 REMARK 470 LEU D 240 CG CD1 CD2 REMARK 470 THR D 242 OG1 CG2 REMARK 470 LYS D 243 CG CD CE NZ REMARK 470 LEU D 244 CG CD1 CD2 REMARK 470 PHE D 245 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU D 283 CG CD OE1 OE2 REMARK 470 GLU D 289 CG CD OE1 OE2 REMARK 470 LEU D 291 CG CD1 CD2 REMARK 470 SER D 294 OG REMARK 470 ASN D 301 CG OD1 ND2 REMARK 470 TRP D 302 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP D 302 CZ3 CH2 REMARK 470 LYS D 303 CG CD CE NZ REMARK 470 TYR D 305 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 VAL D 306 CG1 CG2 REMARK 470 GLU D 307 CG CD OE1 OE2 REMARK 470 ASP D 309 CG OD1 OD2 REMARK 470 ASP D 319 CG OD1 OD2 REMARK 470 LYS D 329 CG CD CE NZ REMARK 470 GLU D 330 CG CD OE1 OE2 REMARK 470 LYS D 335 CG CD CE NZ REMARK 470 GLN D 337 CG CD OE1 NE2 REMARK 470 GLU D 341 CG CD OE1 OE2 REMARK 470 ARG D 357 CG CD NE CZ NH1 NH2 REMARK 470 GLU D 358 CG CD OE1 OE2 REMARK 470 LYS D 359 CG CD CE NZ
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLN A 116 N - CA - C ANGL. DEV. = -18.4 DEGREES REMARK 500 GLN B 116 N - CA - C ANGL. DEV. = -18.1 DEGREES REMARK 500 GLN C 116 N - CA - C ANGL. DEV. = -16.9 DEGREES REMARK 500 GLN D 116 N - CA - C ANGL. DEV. = -17.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 83 16.87 -179.67 REMARK 500 ALA A 134 -65.80 -97.22 REMARK 500 SER A 217 173.74 179.00 REMARK 500 PHE A 340 -70.13 -48.02 REMARK 500 ALA B 83 -96.71 -176.70 REMARK 500 ALA B 134 -73.38 -96.99 REMARK 500 HIS B 180 68.08 -157.87 REMARK 500 ALA C 83 67.05 -166.25 REMARK 500 ALA C 115 159.29 175.86 REMARK 500 ALA C 134 -69.81 -93.93 REMARK 500 HIS C 180 70.01 -158.57 REMARK 500 ASN D 66 10.47 -142.93 REMARK 500 ALA D 115 162.02 178.79 REMARK 500 ALA D 134 -71.63 -90.59 REMARK 500 THR D 242 -62.01 -99.89 REMARK 500 REMARK 500 REMARK: NULL
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NDP A 701 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NDP B 702 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NDP C 703 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NDP D 704 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GDR A 801 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GDR A 802 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GDR A 803
DBREF 1N7G A 1 373 UNP P93031 GMD2_ARATH 1 373 DBREF 1N7G B 1 373 UNP P93031 GMD2_ARATH 1 373 DBREF 1N7G C 1 373 UNP P93031 GMD2_ARATH 1 373 DBREF 1N7G D 1 373 UNP P93031 GMD2_ARATH 1 373
SEQADV 1N7G LEU A 374 UNP P93031 EXPRESSION TAG SEQADV 1N7G GLU A 375 UNP P93031 EXPRESSION TAG SEQADV 1N7G HIS A 376 UNP P93031 EXPRESSION TAG SEQADV 1N7G HIS A 377 UNP P93031 EXPRESSION TAG SEQADV 1N7G HIS A 378 UNP P93031 EXPRESSION TAG SEQADV 1N7G HIS A 379 UNP P93031 EXPRESSION TAG SEQADV 1N7G HIS A 380 UNP P93031 EXPRESSION TAG SEQADV 1N7G HIS A 381 UNP P93031 EXPRESSION TAG SEQADV 1N7G LEU B 374 UNP P93031 EXPRESSION TAG SEQADV 1N7G GLU B 375 UNP P93031 EXPRESSION TAG SEQADV 1N7G HIS B 376 UNP P93031 EXPRESSION TAG SEQADV 1N7G HIS B 377 UNP P93031 EXPRESSION TAG SEQADV 1N7G HIS B 378 UNP P93031 EXPRESSION TAG SEQADV 1N7G HIS B 379 UNP P93031 EXPRESSION TAG SEQADV 1N7G HIS B 380 UNP P93031 EXPRESSION TAG SEQADV 1N7G HIS B 381 UNP P93031 EXPRESSION TAG SEQADV 1N7G LEU C 374 UNP P93031 EXPRESSION TAG SEQADV 1N7G GLU C 375 UNP P93031 EXPRESSION TAG SEQADV 1N7G HIS C 376 UNP P93031 EXPRESSION TAG SEQADV 1N7G HIS C 377 UNP P93031 EXPRESSION TAG SEQADV 1N7G HIS C 378 UNP P93031 EXPRESSION TAG SEQADV 1N7G HIS C 379 UNP P93031 EXPRESSION TAG SEQADV 1N7G HIS C 380 UNP P93031 EXPRESSION TAG SEQADV 1N7G HIS C 381 UNP P93031 EXPRESSION TAG SEQADV 1N7G LEU D 374 UNP P93031 EXPRESSION TAG SEQADV 1N7G GLU D 375 UNP P93031 EXPRESSION TAG SEQADV 1N7G HIS D 376 UNP P93031 EXPRESSION TAG SEQADV 1N7G HIS D 377 UNP P93031 EXPRESSION TAG SEQADV 1N7G HIS D 378 UNP P93031 EXPRESSION TAG SEQADV 1N7G HIS D 379 UNP P93031 EXPRESSION TAG SEQADV 1N7G HIS D 380 UNP P93031 EXPRESSION TAG SEQADV 1N7G HIS D 381 UNP P93031 EXPRESSION TAG
SEQRES 1 A 381 MET ALA SER GLU ASN ASN GLY SER ARG SER ASP SER GLU SEQRES 2 A 381 SER ILE THR ALA PRO LYS ALA ASP SER THR VAL VAL GLU SEQRES 3 A 381 PRO ARG LYS ILE ALA LEU ILE THR GLY ILE THR GLY GLN SEQRES 4 A 381 ASP GLY SER TYR LEU THR GLU PHE LEU LEU GLY LYS GLY SEQRES 5 A 381 TYR GLU VAL HIS GLY LEU ILE ARG ARG SER SER ASN PHE SEQRES 6 A 381 ASN THR GLN ARG ILE ASN HIS ILE TYR ILE ASP PRO HIS SEQRES 7 A 381 ASN VAL ASN LYS ALA LEU MET LYS LEU HIS TYR ALA ASP SEQRES 8 A 381 LEU THR ASP ALA SER SER LEU ARG ARG TRP ILE ASP VAL SEQRES 9 A 381 ILE LYS PRO ASP GLU VAL TYR ASN LEU ALA ALA GLN SER SEQRES 10 A 381 HIS VAL ALA VAL SER PHE GLU ILE PRO ASP TYR THR ALA SEQRES 11 A 381 ASP VAL VAL ALA THR GLY ALA LEU ARG LEU LEU GLU ALA SEQRES 12 A 381 VAL ARG SER HIS THR ILE ASP SER GLY ARG THR VAL LYS SEQRES 13 A 381 TYR TYR GLN ALA GLY SER SER GLU MET PHE GLY SER THR SEQRES 14 A 381 PRO PRO PRO GLN SER GLU THR THR PRO PHE HIS PRO ARG SEQRES 15 A 381 SER PRO TYR ALA ALA SER LYS CYS ALA ALA HIS TRP TYR SEQRES 16 A 381 THR VAL ASN TYR ARG GLU ALA TYR GLY LEU PHE ALA CYS SEQRES 17 A 381 ASN GLY ILE LEU PHE ASN HIS GLU SER PRO ARG ARG GLY SEQRES 18 A 381 GLU ASN PHE VAL THR ARG LYS ILE THR ARG ALA LEU GLY SEQRES 19 A 381 ARG ILE LYS VAL GLY LEU GLN THR LYS LEU PHE LEU GLY SEQRES 20 A 381 ASN LEU GLN ALA SER ARG ASP TRP GLY PHE ALA GLY ASP SEQRES 21 A 381 TYR VAL GLU ALA MET TRP LEU MET LEU GLN GLN GLU LYS SEQRES 22 A 381 PRO ASP ASP TYR VAL VAL ALA THR GLU GLU GLY HIS THR SEQRES 23 A 381 VAL GLU GLU PHE LEU ASP VAL SER PHE GLY TYR LEU GLY SEQRES 24 A 381 LEU ASN TRP LYS ASP TYR VAL GLU ILE ASP GLN ARG TYR SEQRES 25 A 381 PHE ARG PRO ALA GLU VAL ASP ASN LEU GLN GLY ASP ALA SEQRES 26 A 381 SER LYS ALA LYS GLU VAL LEU GLY TRP LYS PRO GLN VAL SEQRES 27 A 381 GLY PHE GLU LYS LEU VAL LYS MET MET VAL ASP GLU ASP SEQRES 28 A 381 LEU GLU LEU ALA LYS ARG GLU LYS VAL LEU VAL ASP ALA SEQRES 29 A 381 GLY TYR MET ASP ALA LYS GLN GLN PRO LEU GLU HIS HIS SEQRES 30 A 381 HIS HIS HIS HIS SEQRES 1 B 381 MET ALA SER GLU ASN ASN GLY SER ARG SER ASP SER GLU SEQRES 2 B 381 SER ILE THR ALA PRO LYS ALA ASP SER THR VAL VAL GLU SEQRES 3 B 381 PRO ARG LYS ILE ALA LEU ILE THR GLY ILE THR GLY GLN SEQRES 4 B 381 ASP GLY SER TYR LEU THR GLU PHE LEU LEU GLY LYS GLY SEQRES 5 B 381 TYR GLU VAL HIS GLY LEU ILE ARG ARG SER SER ASN PHE SEQRES 6 B 381 ASN THR GLN ARG ILE ASN HIS ILE TYR ILE ASP PRO HIS SEQRES 7 B 381 ASN VAL ASN LYS ALA LEU MET LYS LEU HIS TYR ALA ASP SEQRES 8 B 381 LEU THR ASP ALA SER SER LEU ARG ARG TRP ILE ASP VAL SEQRES 9 B 381 ILE LYS PRO ASP GLU VAL TYR ASN LEU ALA ALA GLN SER SEQRES 10 B 381 HIS VAL ALA VAL SER PHE GLU ILE PRO ASP TYR THR ALA SEQRES 11 B 381 ASP VAL VAL ALA THR GLY ALA LEU ARG LEU LEU GLU ALA SEQRES 12 B 381 VAL ARG SER HIS THR ILE ASP SER GLY ARG THR VAL LYS SEQRES 13 B 381 TYR TYR GLN ALA GLY SER SER GLU MET PHE GLY SER THR SEQRES 14 B 381 PRO PRO PRO GLN SER GLU THR THR PRO PHE HIS PRO ARG SEQRES 15 B 381 SER PRO TYR ALA ALA SER LYS CYS ALA ALA HIS TRP TYR SEQRES 16 B 381 THR VAL ASN TYR ARG GLU ALA TYR GLY LEU PHE ALA CYS SEQRES 17 B 381 ASN GLY ILE LEU PHE ASN HIS GLU SER PRO ARG ARG GLY SEQRES 18 B 381 GLU ASN PHE VAL THR ARG LYS ILE THR ARG ALA LEU GLY SEQRES 19 B 381 ARG ILE LYS VAL GLY LEU GLN THR LYS LEU PHE LEU GLY SEQRES 20 B 381 ASN LEU GLN ALA SER ARG ASP TRP GLY PHE ALA GLY ASP SEQRES 21 B 381 TYR VAL GLU ALA MET TRP LEU MET LEU GLN GLN GLU LYS SEQRES 22 B 381 PRO ASP ASP TYR VAL VAL ALA THR GLU GLU GLY HIS THR SEQRES 23 B 381 VAL GLU GLU PHE LEU ASP VAL SER PHE GLY TYR LEU GLY SEQRES 24 B 381 LEU ASN TRP LYS ASP TYR VAL GLU ILE ASP GLN ARG TYR SEQRES 25 B 381 PHE ARG PRO ALA GLU VAL ASP ASN LEU GLN GLY ASP ALA SEQRES 26 B 381 SER LYS ALA LYS GLU VAL LEU GLY TRP LYS PRO GLN VAL SEQRES 27 B 381 GLY PHE GLU LYS LEU VAL LYS MET MET VAL ASP GLU ASP SEQRES 28 B 381 LEU GLU LEU ALA LYS ARG GLU LYS VAL LEU VAL ASP ALA SEQRES 29 B 381 GLY TYR MET ASP ALA LYS GLN GLN PRO LEU GLU HIS HIS SEQRES 30 B 381 HIS HIS HIS HIS SEQRES 1 C 381 MET ALA SER GLU ASN ASN GLY SER ARG SER ASP SER GLU SEQRES 2 C 381 SER ILE THR ALA PRO LYS ALA ASP SER THR VAL VAL GLU SEQRES 3 C 381 PRO ARG LYS ILE ALA LEU ILE THR GLY ILE THR GLY GLN SEQRES 4 C 381 ASP GLY SER TYR LEU THR GLU PHE LEU LEU GLY LYS GLY SEQRES 5 C 381 TYR GLU VAL HIS GLY LEU ILE ARG ARG SER SER ASN PHE SEQRES 6 C 381 ASN THR GLN ARG ILE ASN HIS ILE TYR ILE ASP PRO HIS SEQRES 7 C 381 ASN VAL ASN LYS ALA LEU MET LYS LEU HIS TYR ALA ASP SEQRES 8 C 381 LEU THR ASP ALA SER SER LEU ARG ARG TRP ILE ASP VAL SEQRES 9 C 381 ILE LYS PRO ASP GLU VAL TYR ASN LEU ALA ALA GLN SER SEQRES 10 C 381 HIS VAL ALA VAL SER PHE GLU ILE PRO ASP TYR THR ALA SEQRES 11 C 381 ASP VAL VAL ALA THR GLY ALA LEU ARG LEU LEU GLU ALA SEQRES 12 C 381 VAL ARG SER HIS THR ILE ASP SER GLY ARG THR VAL LYS SEQRES 13 C 381 TYR TYR GLN ALA GLY SER SER GLU MET PHE GLY SER THR SEQRES 14 C 381 PRO PRO PRO GLN SER GLU THR THR PRO PHE HIS PRO ARG SEQRES 15 C 381 SER PRO TYR ALA ALA SER LYS CYS ALA ALA HIS TRP TYR SEQRES 16 C 381 THR VAL ASN TYR ARG GLU ALA TYR GLY LEU PHE ALA CYS SEQRES 17 C 381 ASN GLY ILE LEU PHE ASN HIS GLU SER PRO ARG ARG GLY SEQRES 18 C 381 GLU ASN PHE VAL THR ARG LYS ILE THR ARG ALA LEU GLY SEQRES 19 C 381 ARG ILE LYS VAL GLY LEU GLN THR LYS LEU PHE LEU GLY SEQRES 20 C 381 ASN LEU GLN ALA SER ARG ASP TRP GLY PHE ALA GLY ASP SEQRES 21 C 381 TYR VAL GLU ALA MET TRP LEU MET LEU GLN GLN GLU LYS SEQRES 22 C 381 PRO ASP ASP TYR VAL VAL ALA THR GLU GLU GLY HIS THR SEQRES 23 C 381 VAL GLU GLU PHE LEU ASP VAL SER PHE GLY TYR LEU GLY SEQRES 24 C 381 LEU ASN TRP LYS ASP TYR VAL GLU ILE ASP GLN ARG TYR SEQRES 25 C 381 PHE ARG PRO ALA GLU VAL ASP ASN LEU GLN GLY ASP ALA SEQRES 26 C 381 SER LYS ALA LYS GLU VAL LEU GLY TRP LYS PRO GLN VAL SEQRES 27 C 381 GLY PHE GLU LYS LEU VAL LYS MET MET VAL ASP GLU ASP SEQRES 28 C 381 LEU GLU LEU ALA LYS ARG GLU LYS VAL LEU VAL ASP ALA SEQRES 29 C 381 GLY TYR MET ASP ALA LYS GLN GLN PRO LEU GLU HIS HIS SEQRES 30 C 381 HIS HIS HIS HIS SEQRES 1 D 381 MET ALA SER GLU ASN ASN GLY SER ARG SER ASP SER GLU SEQRES 2 D 381 SER ILE THR ALA PRO LYS ALA ASP SER THR VAL VAL GLU SEQRES 3 D 381 PRO ARG LYS ILE ALA LEU ILE THR GLY ILE THR GLY GLN SEQRES 4 D 381 ASP GLY SER TYR LEU THR GLU PHE LEU LEU GLY LYS GLY SEQRES 5 D 381 TYR GLU VAL HIS GLY LEU ILE ARG ARG SER SER ASN PHE SEQRES 6 D 381 ASN THR GLN ARG ILE ASN HIS ILE TYR ILE ASP PRO HIS SEQRES 7 D 381 ASN VAL ASN LYS ALA LEU MET LYS LEU HIS TYR ALA ASP SEQRES 8 D 381 LEU THR ASP ALA SER SER LEU ARG ARG TRP ILE ASP VAL SEQRES 9 D 381 ILE LYS PRO ASP GLU VAL TYR ASN LEU ALA ALA GLN SER SEQRES 10 D 381 HIS VAL ALA VAL SER PHE GLU ILE PRO ASP TYR THR ALA SEQRES 11 D 381 ASP VAL VAL ALA THR GLY ALA LEU ARG LEU LEU GLU ALA SEQRES 12 D 381 VAL ARG SER HIS THR ILE ASP SER GLY ARG THR VAL LYS SEQRES 13 D 381 TYR TYR GLN ALA GLY SER SER GLU MET PHE GLY SER THR SEQRES 14 D 381 PRO PRO PRO GLN SER GLU THR THR PRO PHE HIS PRO ARG SEQRES 15 D 381 SER PRO TYR ALA ALA SER LYS CYS ALA ALA HIS TRP TYR SEQRES 16 D 381 THR VAL ASN TYR ARG GLU ALA TYR GLY LEU PHE ALA CYS SEQRES 17 D 381 ASN GLY ILE LEU PHE ASN HIS GLU SER PRO ARG ARG GLY SEQRES 18 D 381 GLU ASN PHE VAL THR ARG LYS ILE THR ARG ALA LEU GLY SEQRES 19 D 381 ARG ILE LYS VAL GLY LEU GLN THR LYS LEU PHE LEU GLY SEQRES 20 D 381 ASN LEU GLN ALA SER ARG ASP TRP GLY PHE ALA GLY ASP SEQRES 21 D 381 TYR VAL GLU ALA MET TRP LEU MET LEU GLN GLN GLU LYS SEQRES 22 D 381 PRO ASP ASP TYR VAL VAL ALA THR GLU GLU GLY HIS THR SEQRES 23 D 381 VAL GLU GLU PHE LEU ASP VAL SER PHE GLY TYR LEU GLY SEQRES 24 D 381 LEU ASN TRP LYS ASP TYR VAL GLU ILE ASP GLN ARG TYR SEQRES 25 D 381 PHE ARG PRO ALA GLU VAL ASP ASN LEU GLN GLY ASP ALA SEQRES 26 D 381 SER LYS ALA LYS GLU VAL LEU GLY TRP LYS PRO GLN VAL SEQRES 27 D 381 GLY PHE GLU LYS LEU VAL LYS MET MET VAL ASP GLU ASP SEQRES 28 D 381 LEU GLU LEU ALA LYS ARG GLU LYS VAL LEU VAL ASP ALA SEQRES 29 D 381 GLY TYR MET ASP ALA LYS GLN GLN PRO LEU GLU HIS HIS SEQRES 30 D 381 HIS HIS HIS HIS
HET NDP A 701 48 HET NDP B 702 48 HET NDP C 703 48 HET NDP D 704 48 HET GDR A 801 38 HET GDR A 802 38 HET GDR A 803 38
HETNAM NDP NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE HETNAM 2 NDP PHOSPHATE HETNAM GDR GUANOSINE-5'-DIPHOSPHATE-RHAMNOSE
FORMUL 5 NDP 4(C21 H30 N7 O17 P3) FORMUL 9 GDR 3(C16 H25 N5 O15 P2) FORMUL 10 HOH *475(H2 O)
HELIX 1 1 GLY A 38 GLY A 50 1 13 HELIX 2 2 ASP A 94 LYS A 106 1 13 HELIX 3 3 HIS A 118 ILE A 125 1 8 HELIX 4 4 ILE A 125 ALA A 134 1 10 HELIX 5 5 ALA A 134 GLY A 152 1 19 HELIX 6 6 GLU A 164 GLY A 167 5 4 HELIX 7 7 SER A 183 GLY A 204 1 22 HELIX 8 8 PHE A 224 VAL A 238 1 15 HELIX 9 9 ALA A 258 LEU A 269 1 12 HELIX 10 10 VAL A 287 LEU A 298 1 12 HELIX 11 11 ASN A 301 ASP A 304 5 4 HELIX 12 12 GLN A 310 PHE A 313 5 4 HELIX 13 13 ALA A 325 GLY A 333 1 9 HELIX 14 14 GLY A 339 ASP A 363 1 25 HELIX 15 15 GLY B 38 GLY B 50 1 13 HELIX 16 16 ILE B 70 ILE B 75 1 6 HELIX 17 17 ASP B 94 LYS B 106 1 13 HELIX 18 18 HIS B 118 ILE B 125 1 8 HELIX 19 19 ILE B 125 ALA B 134 1 10 HELIX 20 20 ALA B 134 GLY B 152 1 19 HELIX 21 21 GLU B 164 GLY B 167 5 4 HELIX 22 22 SER B 183 GLY B 204 1 22 HELIX 23 23 PHE B 224 VAL B 238 1 15 HELIX 24 24 ALA B 258 GLN B 271 1 14 HELIX 25 25 VAL B 287 LEU B 298 1 12 HELIX 26 26 ASN B 301 ASP B 304 5 4 HELIX 27 27 GLN B 310 PHE B 313 5 4 HELIX 28 28 ALA B 325 GLY B 333 1 9 HELIX 29 29 GLY B 339 ALA B 364 1 26 HELIX 30 30 GLY C 38 GLY C 50 1 13 HELIX 31 31 ILE C 70 ILE C 75 5 6 HELIX 32 32 ASP C 94 LYS C 106 1 13 HELIX 33 33 HIS C 118 ILE C 125 1 8 HELIX 34 34 ILE C 125 ALA C 134 1 10 HELIX 35 35 ALA C 134 GLY C 152 1 19 HELIX 36 36 GLU C 164 PHE C 166 5 3 HELIX 37 37 SER C 183 GLY C 204 1 22 HELIX 38 38 PHE C 224 VAL C 238 1 15 HELIX 39 39 ALA C 258 GLN C 271 1 14 HELIX 40 40 VAL C 287 LEU C 298 1 12 HELIX 41 41 ASN C 301 ASP C 304 5 4 HELIX 42 42 GLN C 310 PHE C 313 5 4 HELIX 43 43 ALA C 325 GLY C 333 1 9 HELIX 44 44 GLY C 339 ALA C 364 1 26 HELIX 45 45 GLY D 38 LYS D 51 1 14 HELIX 46 46 ILE D 70 ILE D 75 1 6 HELIX 47 47 ASP D 94 LYS D 106 1 13 HELIX 48 48 HIS D 118 ILE D 125 1 8 HELIX 49 49 ILE D 125 ALA D 134 1 10 HELIX 50 50 ALA D 134 GLY D 152 1 19 HELIX 51 51 GLU D 164 PHE D 166 5 3 HELIX 52 52 SER D 183 GLY D 204 1 22 HELIX 53 53 PHE D 224 VAL D 238 1 15 HELIX 54 54 ALA D 258 LEU D 269 1 12 HELIX 55 55 THR D 286 LEU D 298 1 13 HELIX 56 56 ASN D 301 TYR D 305 5 5 HELIX 57 57 ALA D 325 LEU D 332 1 8 HELIX 58 58 GLY D 339 VAL D 362 1 24
SHEET 1 A 7 MET A 85 TYR A 89 0 SHEET 2 A 7 GLU A 54 ILE A 59 1 N ILE A 59 O HIS A 88 SHEET 3 A 7 ILE A 30 THR A 34 1 N ALA A 31 O HIS A 56 SHEET 4 A 7 GLU A 109 ASN A 112 1 O TYR A 111 N LEU A 32 SHEET 5 A 7 LYS A 156 SER A 162 1 O LYS A 156 N VAL A 110 SHEET 6 A 7 PHE A 206 LEU A 212 1 O PHE A 206 N TYR A 157 SHEET 7 A 7 ASP A 276 VAL A 279 1 O TYR A 277 N ILE A 211 SHEET 1 B 2 HIS A 215 GLU A 216 0 SHEET 2 B 2 GLY A 256 PHE A 257 1 O GLY A 256 N GLU A 216 SHEET 1 C 2 LEU A 244 LEU A 246 0 SHEET 2 C 2 VAL A 306 ILE A 308 1 O GLU A 307 N LEU A 244 SHEET 1 D 2 SER A 252 ARG A 253 0 SHEET 2 D 2 HIS A 285 THR A 286 -1 O HIS A 285 N ARG A 253 SHEET 1 E 7 MET B 85 TYR B 89 0 SHEET 2 E 7 GLU B 54 ILE B 59 1 N ILE B 59 O HIS B 88 SHEET 3 E 7 ILE B 30 THR B 34 1 N ALA B 31 O HIS B 56 SHEET 4 E 7 GLU B 109 ASN B 112 1 O GLU B 109 N LEU B 32 SHEET 5 E 7 LYS B 156 SER B 162 1 O LYS B 156 N VAL B 110 SHEET 6 E 7 PHE B 206 LEU B 212 1 O PHE B 206 N TYR B 157 SHEET 7 E 7 ASP B 276 VAL B 279 1 O TYR B 277 N ILE B 211 SHEET 1 F 2 HIS B 215 GLU B 216 0 SHEET 2 F 2 GLY B 256 PHE B 257 1 O GLY B 256 N GLU B 216 SHEET 1 G 2 LEU B 244 LEU B 246 0 SHEET 2 G 2 VAL B 306 ILE B 308 1 O GLU B 307 N LEU B 246 SHEET 1 H 2 SER B 252 ARG B 253 0 SHEET 2 H 2 HIS B 285 THR B 286 -1 O HIS B 285 N ARG B 253 SHEET 1 I 7 MET C 85 TYR C 89 0 SHEET 2 I 7 GLU C 54 ILE C 59 1 N ILE C 59 O HIS C 88 SHEET 3 I 7 ILE C 30 THR C 34 1 N ILE C 33 O HIS C 56 SHEET 4 I 7 GLU C 109 ASN C 112 1 O GLU C 109 N LEU C 32 SHEET 5 I 7 LYS C 156 SER C 162 1 O TYR C 158 N VAL C 110 SHEET 6 I 7 PHE C 206 LEU C 212 1 O PHE C 206 N TYR C 157 SHEET 7 I 7 ASP C 276 VAL C 279 1 O TYR C 277 N ILE C 211 SHEET 1 J 2 HIS C 215 GLU C 216 0 SHEET 2 J 2 GLY C 256 PHE C 257 1 O GLY C 256 N GLU C 216 SHEET 1 K 2 LEU C 244 LEU C 246 0 SHEET 2 K 2 VAL C 306 ILE C 308 1 O GLU C 307 N LEU C 246 SHEET 1 L 2 SER C 252 ARG C 253 0 SHEET 2 L 2 HIS C 285 THR C 286 -1 O HIS C 285 N ARG C 253 SHEET 1 M 7 MET D 85 TYR D 89 0 SHEET 2 M 7 GLU D 54 ILE D 59 1 N ILE D 59 O HIS D 88 SHEET 3 M 7 ILE D 30 THR D 34 1 N ALA D 31 O HIS D 56 SHEET 4 M 7 GLU D 109 ASN D 112 1 O TYR D 111 N LEU D 32 SHEET 5 M 7 LYS D 156 SER D 162 1 O LYS D 156 N VAL D 110 SHEET 6 M 7 PHE D 206 LEU D 212 1 O PHE D 206 N TYR D 157 SHEET 7 M 7 ASP D 276 VAL D 279 1 O TYR D 277 N ILE D 211 SHEET 1 N 2 HIS D 215 GLU D 216 0 SHEET 2 N 2 GLY D 256 PHE D 257 1 O GLY D 256 N GLU D 216
CISPEP 1 PRO A 171 PRO A 172 0 0.00 CISPEP 2 PRO B 171 PRO B 172 0 -0.32 CISPEP 3 PRO C 171 PRO C 172 0 -0.17 CISPEP 4 PRO D 171 PRO D 172 0 -0.14
SITE 1 AC1 39 GLY A 35 THR A 37 GLY A 38 GLN A 39 SITE 2 AC1 39 ASP A 40 ARG A 60 ASP A 91 LEU A 92 SITE 3 AC1 39 LEU A 113 ALA A 114 ALA A 115 SER A 117 SITE 4 AC1 39 TYR A 128 VAL A 132 ALA A 160 GLY A 161 SITE 5 AC1 39 SER A 162 TYR A 185 LYS A 189 LEU A 212 SITE 6 AC1 39 ASN A 214 HIS A 215 ARG A 220 GDR A 801 SITE 7 AC1 39 HOH A 806 HOH A 807 HOH A 810 HOH A 820 SITE 8 AC1 39 HOH A 825 HOH A 837 HOH A 838 HOH A 839 SITE 9 AC1 39 HOH A 847 HOH A 851 HOH A 929 HOH A 931 SITE 10 AC1 39 ARG C 61 SER C 62 SER C 63 SITE 1 AC2 38 GDR A 802 HOH A 862 GLY B 35 THR B 37 SITE 2 AC2 38 GLY B 38 GLN B 39 ASP B 40 ARG B 60 SITE 3 AC2 38 ASP B 91 LEU B 92 LEU B 113 ALA B 114 SITE 4 AC2 38 ALA B 115 SER B 117 TYR B 128 VAL B 132 SITE 5 AC2 38 ALA B 160 GLY B 161 SER B 162 TYR B 185 SITE 6 AC2 38 LYS B 189 LEU B 212 ASN B 214 HIS B 215 SITE 7 AC2 38 ARG B 220 HOH B 705 HOH B 706 HOH B 719 SITE 8 AC2 38 HOH B 721 HOH B 725 HOH B 728 HOH B 733 SITE 9 AC2 38 HOH B 743 HOH B 760 HOH B 778 ARG D 61 SITE 10 AC2 38 SER D 62 SER D 63 SITE 1 AC3 38 ARG A 61 SER A 62 SER A 63 GDR A 803 SITE 2 AC3 38 HOH A 854 GLY C 35 THR C 37 GLY C 38 SITE 3 AC3 38 GLN C 39 ASP C 40 ARG C 60 ASP C 91 SITE 4 AC3 38 LEU C 92 LEU C 113 ALA C 114 ALA C 115 SITE 5 AC3 38 SER C 117 TYR C 128 VAL C 132 ALA C 160 SITE 6 AC3 38 GLY C 161 SER C 162 TYR C 185 LYS C 189 SITE 7 AC3 38 LEU C 212 ASN C 214 HIS C 215 ARG C 220 SITE 8 AC3 38 HOH C 704 HOH C 719 HOH C 723 HOH C 724 SITE 9 AC3 38 HOH C 726 HOH C 731 HOH C 737 HOH C 747 SITE 10 AC3 38 HOH C 748 HOH C 749 SITE 1 AC4 38 ARG B 61 SER B 62 SER B 63 GLY D 35 SITE 2 AC4 38 THR D 37 GLY D 38 GLN D 39 ASP D 40 SITE 3 AC4 38 ARG D 60 ASP D 91 LEU D 92 LEU D 113 SITE 4 AC4 38 ALA D 114 ALA D 115 SER D 117 TYR D 128 SITE 5 AC4 38 VAL D 132 ALA D 160 GLY D 161 SER D 162 SITE 6 AC4 38 TYR D 185 LYS D 189 LEU D 212 ASN D 214 SITE 7 AC4 38 HIS D 215 ARG D 220 HOH D 708 HOH D 709 SITE 8 AC4 38 HOH D 712 HOH D 719 HOH D 720 HOH D 721 SITE 9 AC4 38 HOH D 731 HOH D 769 HOH D 779 HOH D 780 SITE 10 AC4 38 HOH D 795 HOH D 800 SITE 1 AC5 29 SER A 117 HIS A 118 VAL A 119 SER A 162 SITE 2 AC5 29 SER A 163 GLU A 164 TYR A 185 ASN A 214 SITE 3 AC5 29 ARG A 220 ASN A 223 PHE A 224 VAL A 225 SITE 4 AC5 29 LYS A 228 GLY A 247 ASN A 248 ALA A 251 SITE 5 AC5 29 ARG A 253 VAL A 287 TYR A 312 ARG A 314 SITE 6 AC5 29 GLU A 317 NDP A 701 HOH A 822 HOH A 823 SITE 7 AC5 29 HOH A 828 HOH A 832 HOH A 867 HOH A 922 SITE 8 AC5 29 HOH A 931 SITE 1 AC6 29 HOH A 858 HOH A 862 SER B 117 HIS B 118 SITE 2 AC6 29 VAL B 119 SER B 162 SER B 163 GLU B 164 SITE 3 AC6 29 TYR B 185 ASN B 214 ARG B 220 ASN B 223 SITE 4 AC6 29 PHE B 224 VAL B 225 LYS B 228 LEU B 246 SITE 5 AC6 29 GLY B 247 ASN B 248 ALA B 251 ARG B 253 SITE 6 AC6 29 VAL B 287 TYR B 312 ARG B 314 GLU B 317 SITE 7 AC6 29 NDP B 702 HOH B 737 HOH B 748 HOH B 751 SITE 8 AC6 29 HOH B 752 SITE 1 AC7 30 HOH A 854 HOH A 880 HOH A 916 SER C 117 SITE 2 AC7 30 HIS C 118 VAL C 119 SER C 162 SER C 163 SITE 3 AC7 30 GLU C 164 TYR C 185 ASN C 214 ARG C 220 SITE 4 AC7 30 ASN C 223 PHE C 224 VAL C 225 LYS C 228 SITE 5 AC7 30 LEU C 246 GLY C 247 ASN C 248 ALA C 251 SITE 6 AC7 30 ARG C 253 VAL C 287 TYR C 312 ARG C 314 SITE 7 AC7 30 GLU C 317 NDP C 703 HOH C 722 HOH C 735 SITE 8 AC7 30 HOH C 786 HOH C 830
CRYST1 113.180 119.010 118.890 90.00 90.00 90.00 P 21 21 21 16
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.008835 0.000000 0.000000 0.00000
SCALE2 0.000000 0.008403 0.000000 0.00000
SCALE3 0.000000 0.000000 0.008411 0.00000