10 20 30 40 50 60 70 80 1N0Z - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER TRANSCRIPTION 15-OCT-02 1N0Z
TITLE SOLUTION STRUCTURE OF THE FIRST ZINC-FINGER DOMAIN FROM TITLE 2 ZNF265
COMPND MOL_ID: 1; COMPND 2 MOLECULE: ZNF265; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: ZNF265-F1; COMPND 5 SYNONYM: ZINC FINGER PROTEIN 265; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ZNF265; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: DH5A; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PGEX-4T
KEYWDS ZINC FINGER, RNA SPLICING, TRANSCRIPTION
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR C.A.PLAMBECK,K.FAIRLEY,A.H.Y.KWAN,B.J.WESTMAN,D.ADAMS, AUTHOR 2 B.MORRIS,J.P.MACKAY
REVDAT 2 24-FEB-09 1N0Z 1 VERSN REVDAT 1 22-JUL-03 1N0Z 0
JRNL AUTH C.A.PLAMBECK,A.H.Y.KWAN,D.J.ADAMS,B.J.WESTMAN, JRNL AUTH 2 L.VAN DER WEYDEN,R.L.MEDCALF,B.J.MORRIS,J.P.MACKAY JRNL TITL THE STRUCTURE OF THE ZINC FINGER DOMAIN FROM HUMAN JRNL TITL 2 SPLICING FACTOR ZNF265 FOLD JRNL REF J.BIOL.CHEM. V. 278 22805 2003 JRNL REFN ISSN 0021-9258 JRNL PMID 12657633 JRNL DOI 10.1074/JBC.M301896200
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : DYANA 1.5 REMARK 3 AUTHORS : GUNTERT ET AL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: STRUCTURE CALCULATIONS WERE REMARK 3 PERFORMED USING THE PACKAGE ARIA1.2 (AMBIGUOUS RESTRAINTS IN REMARK 3 ITERATIVE ASSIGNMENT). FINAL STRUCTURES ARE BASED ON 709 REMARK 3 UNAMBIGUOUS NOE-DERIVED DISTANCE CONSTRAINTS, 14 SETS OF REMARK 3 AMBIGUOUS NOE-DERIVED DISTANCE CONSTRAINTS AND 22 ADDITIONAL REMARK 3 DIHEDRAL ANGLE RESTRAINTS.
REMARK 4 REMARK 4 1N0Z COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 18-OCT-02. REMARK 100 THE RCSB ID CODE IS RCSB017383.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 5.8 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1MM ZNF265-F1, 2MM TCEP, REMARK 210 1.7MM ZNZO4 REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D NOESY, 2D TOCSY, DQF-COSY, REMARK 210 SHORT MIXING TIME NOESY, SHORT REMARK 210 MIXING TIME TOCSY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : DRX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 2.5, XEASY 1.3.13, REMARK 210 ARIA 1.2 REMARK 210 METHOD USED : SIMULATED ANNEALING, REMARK 210 MOLECULAR DYNAMICS, TORSION REMARK 210 ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 1000 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED USING STANDARD 2D NMR REMARK 210 HOMONUCLEAR TECHNIQUES.
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 MET A 3 83.71 62.64 REMARK 500 1 ARG A 9 49.43 -91.59 REMARK 500 1 CYS A 22 -79.67 -90.42 REMARK 500 1 PHE A 27 -82.24 -45.41 REMARK 500 1 ALA A 28 -66.65 178.39 REMARK 500 1 LYS A 40 107.22 -59.19 REMARK 500 2 THR A 5 -89.32 62.66 REMARK 500 2 ILE A 16 -75.48 -135.40 REMARK 500 2 CYS A 22 -86.76 -119.41 REMARK 500 2 CYS A 36 -61.24 -93.26 REMARK 500 2 ARG A 38 -132.10 -175.73 REMARK 500 2 THR A 41 88.44 -69.86 REMARK 500 3 THR A 5 -133.02 -90.70 REMARK 500 3 VAL A 10 95.12 -66.95 REMARK 500 3 ILE A 16 -108.89 -111.88 REMARK 500 3 LYS A 20 150.66 72.46 REMARK 500 3 LYS A 21 39.01 -75.62 REMARK 500 3 CYS A 22 -78.60 -77.20 REMARK 500 3 PHE A 27 -80.84 -48.41 REMARK 500 3 ALA A 28 -59.32 179.81 REMARK 500 3 THR A 41 106.49 -46.71 REMARK 500 4 THR A 5 -106.91 -77.91 REMARK 500 4 LYS A 6 48.65 -100.80 REMARK 500 4 VAL A 10 133.54 78.25 REMARK 500 4 ILE A 16 138.98 71.11 REMARK 500 4 CYS A 22 -73.11 -97.06 REMARK 500 4 PHE A 27 -74.91 -65.27 REMARK 500 4 ALA A 28 -76.80 -179.09 REMARK 500 4 ARG A 29 42.79 -77.45 REMARK 500 4 LYS A 40 107.21 -58.60 REMARK 500 4 THR A 42 -42.76 -143.96 REMARK 500 5 MET A 3 -80.23 -104.08 REMARK 500 5 SER A 4 -100.67 54.86 REMARK 500 5 LYS A 6 69.41 -100.86 REMARK 500 5 PHE A 8 77.45 59.55 REMARK 500 5 LYS A 20 31.78 -77.62 REMARK 500 5 CYS A 22 -91.25 -98.65 REMARK 500 6 THR A 5 104.37 68.68 REMARK 500 6 PHE A 8 92.53 -65.73 REMARK 500 6 ILE A 16 -117.21 -98.80 REMARK 500 6 CYS A 22 -79.74 -88.02 REMARK 500 6 PHE A 27 -131.85 -73.75 REMARK 500 6 ALA A 28 -62.99 -140.09 REMARK 500 6 ARG A 29 41.61 -78.95 REMARK 500 6 ARG A 35 -68.26 -104.44 REMARK 500 6 PRO A 44 99.90 -65.83 REMARK 500 7 MET A 3 -52.69 73.10 REMARK 500 7 ASN A 7 -153.33 -100.40 REMARK 500 7 VAL A 10 25.68 -151.58 REMARK 500 7 SER A 11 -139.06 -102.05 REMARK 500 7 CYS A 22 -85.81 -97.20 REMARK 500 7 PHE A 27 -89.40 -61.89 REMARK 500 7 ALA A 28 -65.14 179.81 REMARK 500 7 LYS A 40 102.32 -57.28 REMARK 500 8 MET A 3 -73.06 -77.65 REMARK 500 8 THR A 5 23.97 -78.29 REMARK 500 8 ILE A 16 -101.20 -112.16 REMARK 500 8 CYS A 22 -78.44 -80.28 REMARK 500 8 PHE A 27 -135.59 -76.64 REMARK 500 8 ALA A 28 -50.46 -134.03 REMARK 500 8 ARG A 35 -64.98 -92.78 REMARK 500 9 MET A 3 -62.57 -103.91 REMARK 500 9 CYS A 22 -82.43 -80.56 REMARK 500 9 PHE A 27 -76.47 -51.72 REMARK 500 9 ALA A 28 -80.76 179.67 REMARK 500 9 ARG A 35 -36.89 -147.89 REMARK 500 9 ARG A 38 -156.56 -171.19 REMARK 500 9 LYS A 40 92.15 -59.59 REMARK 500 9 PRO A 44 -155.16 -74.86 REMARK 500 10 SER A 4 -63.58 -141.62 REMARK 500 10 ARG A 9 36.12 -92.58 REMARK 500 10 SER A 11 -168.34 -72.80 REMARK 500 10 CYS A 22 -79.26 -99.28 REMARK 500 10 PHE A 27 -85.24 -61.28 REMARK 500 10 ALA A 28 -58.35 179.98 REMARK 500 10 ARG A 29 31.74 -78.11 REMARK 500 10 LYS A 40 90.39 -64.17 REMARK 500 10 THR A 41 47.03 -89.03 REMARK 500 11 ARG A 9 45.11 -84.79 REMARK 500 11 SER A 11 50.47 -97.08 REMARK 500 11 ASP A 12 -143.57 -82.37 REMARK 500 11 ILE A 16 -80.02 -94.80 REMARK 500 11 CYS A 22 -89.53 -98.24 REMARK 500 12 THR A 5 127.39 68.94 REMARK 500 12 LYS A 6 108.85 -59.15 REMARK 500 12 CYS A 22 -82.39 -110.30 REMARK 500 12 PHE A 27 -79.50 -19.52 REMARK 500 12 ALA A 28 -64.73 -176.50 REMARK 500 12 ARG A 29 41.35 -82.08 REMARK 500 13 LYS A 6 39.21 -92.60 REMARK 500 13 ILE A 16 -60.17 -122.36 REMARK 500 13 CYS A 22 -81.62 -104.21 REMARK 500 14 SER A 2 -106.66 49.06 REMARK 500 14 SER A 4 49.28 -86.62 REMARK 500 14 SER A 11 -136.05 -82.63 REMARK 500 14 CYS A 17 150.42 -41.09 REMARK 500 14 CYS A 22 -83.72 -76.94 REMARK 500 14 PHE A 27 -93.38 -62.67 REMARK 500 14 ALA A 28 -79.88 -163.42 REMARK 500 14 ARG A 29 42.22 -84.48 REMARK 500 14 ARG A 35 -30.73 -142.71 REMARK 500 15 PHE A 8 -158.54 -148.81 REMARK 500 15 ASP A 12 -121.45 -102.57 REMARK 500 15 CYS A 17 141.67 -39.61 REMARK 500 15 CYS A 22 -70.03 -96.31 REMARK 500 15 PHE A 27 -82.49 -18.63 REMARK 500 15 ALA A 28 -50.26 179.45 REMARK 500 15 ARG A 35 -66.72 -123.95 REMARK 500 15 LYS A 40 96.74 -63.32 REMARK 500 16 THR A 5 -105.48 -81.12 REMARK 500 16 PHE A 8 39.94 -89.55 REMARK 500 16 CYS A 22 -83.01 -90.18 REMARK 500 16 PHE A 27 -75.13 -34.81 REMARK 500 16 ALA A 28 -47.67 176.69 REMARK 500 16 ARG A 35 -69.40 -101.00 REMARK 500 17 SER A 11 -136.96 -101.27 REMARK 500 17 CYS A 22 -86.35 -101.91 REMARK 500 17 PHE A 27 -77.70 -53.30 REMARK 500 17 ALA A 28 -65.16 -178.34 REMARK 500 17 ARG A 29 24.37 -71.39 REMARK 500 18 MET A 3 -30.03 79.67 REMARK 500 18 SER A 11 -80.46 -68.30 REMARK 500 18 ASP A 12 -149.53 -102.28 REMARK 500 18 ILE A 16 -75.16 -108.41 REMARK 500 18 CYS A 22 -85.33 -88.38 REMARK 500 18 PHE A 27 -92.58 -83.91 REMARK 500 18 ALA A 28 -62.20 -166.09 REMARK 500 18 LYS A 40 89.70 -69.17 REMARK 500 18 THR A 42 -47.97 75.32 REMARK 500 19 CYS A 22 -83.60 -87.45 REMARK 500 19 ARG A 35 -65.41 -103.33 REMARK 500 19 PRO A 44 -97.31 -66.33 REMARK 500 20 SER A 2 -67.58 69.55 REMARK 500 20 PHE A 8 80.20 61.35 REMARK 500 20 ASP A 12 -145.08 -100.44 REMARK 500 20 LYS A 20 35.91 -81.97 REMARK 500 20 CYS A 22 -74.96 -108.12 REMARK 500 20 PHE A 27 -73.46 -37.02 REMARK 500 20 ALA A 28 -59.32 178.47 REMARK 500 20 LYS A 40 99.99 -55.03 REMARK 500 REMARK 500 REMARK: NULL
REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 1 ZN A 46 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 36 SG REMARK 620 2 CYS A 22 SG 107.8 REMARK 620 3 CYS A 33 SG 109.5 113.0 REMARK 620 4 CYS A 17 SG 110.1 107.9 108.5 REMARK 620 N 1 2 3
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 46
DBREF 1N0Z A 3 42 UNP O95218 ZN265_HUMAN 1 40
SEQADV 1N0Z GLY A 1 UNP O95218 CLONING ARTIFACT SEQADV 1N0Z SER A 2 UNP O95218 CLONING ARTIFACT SEQADV 1N0Z ASP A 34 UNP O95218 ASN 32 ENGINEERED SEQADV 1N0Z GLY A 43 UNP O95218 CLONING ARTIFACT SEQADV 1N0Z PRO A 44 UNP O95218 CLONING ARTIFACT SEQADV 1N0Z ILE A 45 UNP O95218 CLONING ARTIFACT
SEQRES 1 A 45 GLY SER MET SER THR LYS ASN PHE ARG VAL SER ASP GLY SEQRES 2 A 45 ASP TRP ILE CYS PRO ASP LYS LYS CYS GLY ASN VAL ASN SEQRES 3 A 45 PHE ALA ARG ARG THR SER CYS ASP ARG CYS GLY ARG GLU SEQRES 4 A 45 LYS THR THR GLY PRO ILE
HET ZN A 46 1
HETNAM ZN ZINC ION
FORMUL 2 ZN ZN 2+
LINK ZN ZN A 46 SG CYS A 36 1555 1555 2.29 LINK ZN ZN A 46 SG CYS A 22 1555 1555 2.28 LINK ZN ZN A 46 SG CYS A 33 1555 1555 2.29 LINK ZN ZN A 46 SG CYS A 17 1555 1555 2.24
SITE 1 AC1 4 CYS A 17 CYS A 22 CYS A 33 CYS A 36
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000