10 20 30 40 50 60 70 80 1MP4 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER TRANSFERASE 11-SEP-02 1MP4
TITLE W224H VARIANT OF S. ENTERICA RMLA
COMPND MOL_ID: 1; COMPND 2 MOLECULE: W224H VARIANT OF S. ENTERICA RMLA BOUND TO UDP- COMPND 3 GLUCOSE; COMPND 4 CHAIN: A, B; COMPND 5 SYNONYM: THYMIDYLYLTRANSFERASE; COMPND 6 EC: 2.7.7.24; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SALMONELLA ENTERICA; SOURCE 3 ORGANISM_TAXID: 28901; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562
KEYWDS TRANSFERASE
EXPDTA X-RAY DIFFRACTION
AUTHOR W.A.BARTON,J.B.BIGGINS,J.JIANG,J.S.THORSON,D.B.NIKOLOV
REVDAT 3 24-FEB-09 1MP4 1 VERSN REVDAT 2 22-MAR-05 1MP4 1 JRNL REVDAT 1 09-OCT-02 1MP4 0
JRNL AUTH W.A.BARTON,J.B.BIGGINS,J.JIANG,J.S.THORSON, JRNL AUTH 2 D.B.NIKOLOV JRNL TITL EXPANDING PYRIMIDINE DIPHOSPHOSUGAR LIBRARIES VIA JRNL TITL 2 STRUCTURE-BASED NUCLEOTIDYLYLTRANSFERASE JRNL TITL 3 ENGINEERING JRNL REF PROC.NATL.ACAD.SCI.USA V. 99 13397 2002 JRNL REFN ISSN 0027-8424 JRNL PMID 12374866 JRNL DOI 10.1073/PNAS.192468299
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NULL REMARK 3 AUTHORS : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 38811 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.257 REMARK 3 FREE R VALUE : 0.288 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 3911 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4506 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 72 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : NULL REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1MP4 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-SEP-02. REMARK 100 THE RCSB ID CODE IS RCSB017072.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-JUN-01 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X25 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.1395 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 43514 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: PDB ENTRY 1IIN REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.62 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.90 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 7.0, TEMPERATURE 100K
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 219.40000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 109.70000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 164.55000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 54.85000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 274.25000 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 219.40000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 109.70000 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 54.85000 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 164.55000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 274.25000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 44.47900 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 77.03989 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 290 REMARK 465 GLY A 291 REMARK 465 LEU A 292 REMARK 465 LYS B 290 REMARK 465 GLY B 291 REMARK 465 LEU B 292
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O ARG A 220 O GLN B 247 10775 1.98 REMARK 500 O GLN A 247 O ARG B 220 10775 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 32 -82.91 70.42 REMARK 500 ARG A 220 -116.18 -2.51 REMARK 500 LYS B 2 -154.86 -138.28 REMARK 500 THR B 3 75.79 -69.30 REMARK 500 TYR B 32 -83.90 66.60 REMARK 500 PRO B 86 79.98 -67.12 REMARK 500 ALA B 154 -70.29 -70.84 REMARK 500 MET B 218 66.51 -112.25 REMARK 500 ARG B 220 -65.45 -10.41 REMARK 500 REMARK 500 REMARK: NULL
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UPG A 501 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UPG B 502
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1IIM RELATED DB: PDB REMARK 900 THYMIDYLYLTRANSFERASE COMPLEXED WITH TTP REMARK 900 RELATED ID: 1IIN RELATED DB: PDB REMARK 900 THYMIDYLYLTRANSFERASE COMPLEXED WITH UDP-GLUCOSE REMARK 900 RELATED ID: 1MP3 RELATED DB: PDB REMARK 900 L89T VARIANT OF S. ENTERICA RMLA REMARK 900 RELATED ID: 1MP5 RELATED DB: PDB REMARK 900 Y177F VARIANT OF S. ENTERICA RMLA
REMARK 999 REMARK 999 SEQUENCE AUTHOR STATES THE SEQUENCE OF THE DEPOSITED MODEL REMARK 999 DIFFERS FROM THE PUBLISHED SEQUENCE, BECAUSE THERE ARE CONFIRMED REMARK 999 NATURAL MUTATIONS IN THE VARIANT OF SALMONELLA USED IN THIS REMARK 999 ENTRY.
DBREF 1MP4 A 1 292 UNP Q9F7G8 Q9F7G8_9ENTR 1 292 DBREF 1MP4 B 1 292 UNP Q9F7G8 Q9F7G8_9ENTR 1 292
SEQADV 1MP4 GLN A 26 UNP Q9F7G8 LYS 26 SEE REMARK 999 SEQADV 1MP4 ALA A 154 UNP Q9F7G8 LYS 154 SEE REMARK 999 SEQADV 1MP4 HIS A 224 UNP Q9F7G8 TRP 224 ENGINEERED SEQADV 1MP4 GLN B 26 UNP Q9F7G8 LYS 26 SEE REMARK 999 SEQADV 1MP4 ALA B 154 UNP Q9F7G8 LYS 154 SEE REMARK 999 SEQADV 1MP4 HIS B 224 UNP Q9F7G8 TRP 224 ENGINEERED
SEQRES 1 A 292 MET LYS THR ARG LYS GLY ILE ILE LEU ALA GLY GLY SER SEQRES 2 A 292 GLY THR ARG LEU TYR PRO VAL THR MET ALA VAL SER GLN SEQRES 3 A 292 GLN LEU LEU PRO ILE TYR ASP LYS PRO MET ILE TYR TYR SEQRES 4 A 292 PRO LEU SER THR LEU MET LEU ALA GLY ILE ARG ASP ILE SEQRES 5 A 292 LEU ILE ILE SER THR PRO GLN ASP THR PRO ARG PHE GLN SEQRES 6 A 292 GLN LEU LEU GLY ASP GLY SER GLN TRP GLY LEU ASN LEU SEQRES 7 A 292 GLN TYR LYS VAL GLN PRO SER PRO ASP GLY LEU ALA GLN SEQRES 8 A 292 ALA PHE ILE ILE GLY GLU GLU PHE ILE GLY HIS ASP ASP SEQRES 9 A 292 CYS ALA LEU VAL LEU GLY ASP ASN ILE PHE TYR GLY HIS SEQRES 10 A 292 ASP LEU PRO LYS LEU MET GLU ALA ALA VAL ASN LYS GLU SEQRES 11 A 292 SER GLY ALA THR VAL PHE ALA TYR HIS VAL ASN ASP PRO SEQRES 12 A 292 GLU ARG TYR GLY VAL VAL GLU PHE ASP GLN ALA GLY THR SEQRES 13 A 292 ALA VAL SER LEU GLU GLU LYS PRO LEU GLN PRO LYS SER SEQRES 14 A 292 ASN TYR ALA VAL THR GLY LEU TYR PHE TYR ASP ASN SER SEQRES 15 A 292 VAL VAL GLU MET ALA LYS ASN LEU LYS PRO SER ALA ARG SEQRES 16 A 292 GLY GLU LEU GLU ILE THR ASP ILE ASN ARG ILE TYR MET SEQRES 17 A 292 GLU GLN GLY ARG LEU SER VAL ALA MET MET GLY ARG GLY SEQRES 18 A 292 TYR ALA HIS LEU ASP THR GLY THR HIS GLN SER LEU ILE SEQRES 19 A 292 GLU ALA SER ASN PHE ILE ALA THR ILE GLU GLU ARG GLN SEQRES 20 A 292 GLY LEU LYS VAL SER CYS PRO GLU GLU ILE ALA PHE ARG SEQRES 21 A 292 LYS ASN PHE ILE ASN ALA GLN GLN VAL ILE GLU LEU ALA SEQRES 22 A 292 GLY PRO LEU SER LYS ASN ASP TYR GLY LYS TYR LEU LEU SEQRES 23 A 292 LYS MET VAL LYS GLY LEU SEQRES 1 B 292 MET LYS THR ARG LYS GLY ILE ILE LEU ALA GLY GLY SER SEQRES 2 B 292 GLY THR ARG LEU TYR PRO VAL THR MET ALA VAL SER GLN SEQRES 3 B 292 GLN LEU LEU PRO ILE TYR ASP LYS PRO MET ILE TYR TYR SEQRES 4 B 292 PRO LEU SER THR LEU MET LEU ALA GLY ILE ARG ASP ILE SEQRES 5 B 292 LEU ILE ILE SER THR PRO GLN ASP THR PRO ARG PHE GLN SEQRES 6 B 292 GLN LEU LEU GLY ASP GLY SER GLN TRP GLY LEU ASN LEU SEQRES 7 B 292 GLN TYR LYS VAL GLN PRO SER PRO ASP GLY LEU ALA GLN SEQRES 8 B 292 ALA PHE ILE ILE GLY GLU GLU PHE ILE GLY HIS ASP ASP SEQRES 9 B 292 CYS ALA LEU VAL LEU GLY ASP ASN ILE PHE TYR GLY HIS SEQRES 10 B 292 ASP LEU PRO LYS LEU MET GLU ALA ALA VAL ASN LYS GLU SEQRES 11 B 292 SER GLY ALA THR VAL PHE ALA TYR HIS VAL ASN ASP PRO SEQRES 12 B 292 GLU ARG TYR GLY VAL VAL GLU PHE ASP GLN ALA GLY THR SEQRES 13 B 292 ALA VAL SER LEU GLU GLU LYS PRO LEU GLN PRO LYS SER SEQRES 14 B 292 ASN TYR ALA VAL THR GLY LEU TYR PHE TYR ASP ASN SER SEQRES 15 B 292 VAL VAL GLU MET ALA LYS ASN LEU LYS PRO SER ALA ARG SEQRES 16 B 292 GLY GLU LEU GLU ILE THR ASP ILE ASN ARG ILE TYR MET SEQRES 17 B 292 GLU GLN GLY ARG LEU SER VAL ALA MET MET GLY ARG GLY SEQRES 18 B 292 TYR ALA HIS LEU ASP THR GLY THR HIS GLN SER LEU ILE SEQRES 19 B 292 GLU ALA SER ASN PHE ILE ALA THR ILE GLU GLU ARG GLN SEQRES 20 B 292 GLY LEU LYS VAL SER CYS PRO GLU GLU ILE ALA PHE ARG SEQRES 21 B 292 LYS ASN PHE ILE ASN ALA GLN GLN VAL ILE GLU LEU ALA SEQRES 22 B 292 GLY PRO LEU SER LYS ASN ASP TYR GLY LYS TYR LEU LEU SEQRES 23 B 292 LYS MET VAL LYS GLY LEU
HET UPG A 501 36 HET UPG B 502 36
HETNAM UPG URIDINE-5'-DIPHOSPHATE-GLUCOSE
HETSYN UPG URIDINE-5'-MONOPHOSPHATE GLUCOPYRANOSYL-MONOPHOSPHATE HETSYN 2 UPG ESTER
FORMUL 3 UPG 2(C15 H24 N2 O17 P2)
HELIX 1 1 GLY A 14 TYR A 18 5 5 HELIX 2 2 SER A 25 LEU A 28 5 4 HELIX 3 3 ILE A 37 ALA A 47 1 11 HELIX 4 4 ASP A 60 GLY A 69 1 10 HELIX 5 5 GLY A 71 GLY A 75 5 5 HELIX 6 6 ALA A 90 GLY A 96 1 7 HELIX 7 7 GLY A 96 GLY A 101 1 6 HELIX 8 8 ASP A 118 LYS A 129 1 12 HELIX 9 9 ASP A 142 ARG A 145 5 4 HELIX 10 10 SER A 182 ASN A 189 1 8 HELIX 11 11 GLU A 199 GLN A 210 1 12 HELIX 12 12 THR A 229 GLY A 248 1 20 HELIX 13 13 CYS A 253 LYS A 261 1 9 HELIX 14 14 ASN A 265 GLY A 274 1 10 HELIX 15 15 PRO A 275 SER A 277 5 3 HELIX 16 16 ASN A 279 VAL A 289 1 11 HELIX 17 17 GLY B 14 TYR B 18 5 5 HELIX 18 18 PRO B 19 ALA B 23 5 5 HELIX 19 19 SER B 25 LEU B 28 5 4 HELIX 20 20 ILE B 37 ALA B 47 1 11 HELIX 21 21 ASP B 60 GLY B 69 1 10 HELIX 22 22 GLY B 71 GLY B 75 5 5 HELIX 23 23 ALA B 90 GLY B 96 1 7 HELIX 24 24 GLY B 96 GLY B 101 1 6 HELIX 25 25 ASP B 118 LYS B 129 1 12 HELIX 26 26 ASP B 142 ARG B 145 5 4 HELIX 27 27 SER B 182 LEU B 190 1 9 HELIX 28 28 GLU B 199 GLN B 210 1 12 HELIX 29 29 THR B 229 GLY B 248 1 20 HELIX 30 30 CYS B 253 LYS B 261 1 9 HELIX 31 31 ASN B 265 SER B 277 1 13 HELIX 32 32 ASN B 279 VAL B 289 1 11
SHEET 1 A 7 LEU A 213 MET A 217 0 SHEET 2 A 7 ALA A 133 HIS A 139 1 N VAL A 135 O SER A 214 SHEET 3 A 7 TYR A 171 TYR A 179 -1 O ALA A 172 N TYR A 138 SHEET 4 A 7 CYS A 105 LEU A 109 -1 N CYS A 105 O TYR A 179 SHEET 5 A 7 LYS A 5 LEU A 9 1 N ILE A 7 O ALA A 106 SHEET 6 A 7 ASP A 51 SER A 56 1 O LEU A 53 N ILE A 8 SHEET 7 A 7 ASN A 77 VAL A 82 1 O GLN A 79 N ILE A 54 SHEET 1 B 5 LEU A 213 MET A 217 0 SHEET 2 B 5 ALA A 133 HIS A 139 1 N VAL A 135 O SER A 214 SHEET 3 B 5 TYR A 171 TYR A 179 -1 O ALA A 172 N TYR A 138 SHEET 4 B 5 GLY A 147 PHE A 151 -1 N GLY A 147 O VAL A 173 SHEET 5 B 5 ALA A 157 GLU A 162 -1 O GLU A 161 N VAL A 148 SHEET 1 C 2 PRO A 30 ILE A 31 0 SHEET 2 C 2 LYS A 34 PRO A 35 -1 O LYS A 34 N ILE A 31 SHEET 1 D 7 LEU B 213 MET B 217 0 SHEET 2 D 7 ALA B 133 HIS B 139 1 N ALA B 133 O SER B 214 SHEET 3 D 7 TYR B 171 TYR B 179 -1 O ALA B 172 N TYR B 138 SHEET 4 D 7 CYS B 105 LEU B 109 -1 N LEU B 107 O TYR B 177 SHEET 5 D 7 LYS B 5 ALA B 10 1 N ILE B 7 O VAL B 108 SHEET 6 D 7 ASP B 51 SER B 56 1 O LEU B 53 N ILE B 8 SHEET 7 D 7 ASN B 77 VAL B 82 1 O GLN B 79 N ILE B 54 SHEET 1 E 5 LEU B 213 MET B 217 0 SHEET 2 E 5 ALA B 133 HIS B 139 1 N ALA B 133 O SER B 214 SHEET 3 E 5 TYR B 171 TYR B 179 -1 O ALA B 172 N TYR B 138 SHEET 4 E 5 GLY B 147 PHE B 151 -1 N GLY B 147 O VAL B 173 SHEET 5 E 5 ALA B 157 GLU B 162 -1 O GLU B 161 N VAL B 148 SHEET 1 F 2 PRO B 30 ILE B 31 0 SHEET 2 F 2 LYS B 34 PRO B 35 -1 O LYS B 34 N ILE B 31
CISPEP 1 TYR A 18 PRO A 19 0 0.95 CISPEP 2 TYR B 18 PRO B 19 0 0.22
SITE 1 AC1 19 LEU A 9 GLY A 11 GLY A 12 GLN A 27 SITE 2 AC1 19 GLN A 83 PRO A 86 ASP A 87 GLY A 88 SITE 3 AC1 19 LEU A 89 LEU A 109 ASP A 111 TYR A 146 SITE 4 AC1 19 GLY A 147 GLU A 162 LYS A 163 VAL A 173 SITE 5 AC1 19 ARG A 195 ILE A 200 THR A 201 SITE 1 AC2 17 LEU B 9 GLY B 11 GLY B 12 GLN B 83 SITE 2 AC2 17 PRO B 86 ASP B 87 GLY B 88 LEU B 89 SITE 3 AC2 17 LEU B 109 ASP B 111 TYR B 146 GLY B 147 SITE 4 AC2 17 GLU B 162 LYS B 163 VAL B 173 ARG B 195 SITE 5 AC2 17 ILE B 200
CRYST1 88.958 88.958 329.100 90.00 90.00 120.00 P 65 2 2 24
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.011241 0.006490 0.000000 0.00000
SCALE2 0.000000 0.012980 0.000000 0.00000
SCALE3 0.000000 0.000000 0.003039 0.00000