10 20 30 40 50 60 70 80 1MOT - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER MEMBRANE PROTEIN 09-SEP-02 1MOT
TITLE NMR STRUCTURE OF EXTENDED SECOND TRANSMEMBRANE DOMAIN OF TITLE 2 GLYCINE RECEPTOR ALPHA1 SUBUNIT IN SDS MICELLES
COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLYCINE RECEPTOR ALPHA-1 CHAIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: EXTENTED SECOND TRANSMEMBRANE DOMAIN; COMPND 5 SYNONYM: GLYCINE RECEPTOR ALPHA1 SUBUNIT, GLYCINE RECEPTOR COMPND 6 48KDA SUBUNIT, STRYCHNINE BINDING SUBUNIT; COMPND 7 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: GLRA1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PGEX-3X
KEYWDS GLYCINE RECEPTOR, NMR, SECOND TRANSMEMBRANE DOMAIN, KEYWDS 2 MICELLES, MEMBRANE PROTEIN
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR V.E.YUSHMANOV,P.K.MANDAL,Z.LIU,P.TANG,Y.XU
REVDAT 2 24-FEB-09 1MOT 1 VERSN REVDAT 1 23-SEP-03 1MOT 0
JRNL AUTH V.E.YUSHMANOV,P.K.MANDAL,Z.LIU,P.TANG,Y.XU JRNL TITL NMR STRUCTURE AND BACKBONE DYNAMICS OF THE JRNL TITL 2 EXTENDED SECOND TRANSMEMBRANE DOMAIN OF THE HUMAN JRNL TITL 3 NEURONAL GLYCINE RECEPTOR ALPHA1 SUBUNIT JRNL REF BIOCHEMISTRY V. 42 3989 2003 JRNL REFN ISSN 0006-2960 JRNL PMID 12667090 JRNL DOI 10.1021/BI026767G
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.851 REMARK 3 AUTHORS : BRUNGER, A.T. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE STRUCTURES ARE BASED ON A TOTAL REMARK 3 OF 187 RESTRAINTS, 169 ARE NOE-DERIVED DISTANCE CONSTRAINTS,18 REMARK 3 DISTANCE RESTRAINTS FROM HYDROGEN BONDS
REMARK 4 REMARK 4 1MOT COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-SEP-02. REMARK 100 THE RCSB ID CODE IS RCSB017061.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 303 REMARK 210 PH : 5.0 REMARK 210 IONIC STRENGTH : 300 MM SDS CONCENTRATION REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : SDS CONCENTRATION: 300 MM REMARK 210 PEPTIDE CONCENTRATION: 2 MM REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D NOESY, 2D TOCSY, 3D_15N- REMARK 210 SEPARATED_NOESY, COSY, 15N T1, REMARK 210 15N T2, 15N HET-NOE REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ, 500 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE, DRX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : X-PLOR 3.851 REMARK 210 METHOD USED : DISTANCE GEOMETRY, SIMULATED REMARK 210 ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 30 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED USING STANDARD 2D REMARK 210 HOMONUCLEAR AND TRIPLE-RESONANCE NMR SPECTROSCOPY.
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 GLN A 266 -47.37 68.67 REMARK 500 1 SER A 270 -52.89 69.65 REMARK 500 1 ALA A 272 -122.41 -75.45 REMARK 500 1 PRO A 275 56.82 -61.29 REMARK 500 2 PRO A 250 -147.02 -76.33 REMARK 500 2 ALA A 251 -70.33 -150.92 REMARK 500 2 THR A 264 46.05 -86.49 REMARK 500 2 THR A 265 43.76 -74.09 REMARK 500 3 SER A 267 -152.73 -91.09 REMARK 500 3 ARG A 271 43.86 71.43 REMARK 500 4 SER A 267 -126.08 61.66 REMARK 500 4 SER A 268 43.66 -77.24 REMARK 500 4 PRO A 275 60.30 -60.18 REMARK 500 5 SER A 267 -52.69 -163.68 REMARK 500 5 ARG A 271 -53.44 69.28 REMARK 500 6 PRO A 250 60.84 -66.06 REMARK 500 6 ALA A 251 -142.61 56.47 REMARK 500 6 SER A 268 56.48 -69.78 REMARK 500 6 SER A 270 -142.23 58.25 REMARK 500 6 ARG A 271 121.08 72.12 REMARK 500 6 ALA A 272 -140.20 57.27 REMARK 500 6 SER A 273 49.46 -86.41 REMARK 500 6 PRO A 275 50.03 -56.31 REMARK 500 7 PRO A 250 -137.98 -73.23 REMARK 500 7 ALA A 251 -148.41 -76.39 REMARK 500 7 GLN A 266 -61.99 67.50 REMARK 500 7 SER A 267 -141.47 -172.33 REMARK 500 7 SER A 268 -140.81 61.06 REMARK 500 7 ALA A 272 33.81 -81.23 REMARK 500 8 PRO A 250 49.50 -70.13 REMARK 500 8 ALA A 251 -123.62 47.34 REMARK 500 8 GLN A 266 92.04 -64.98 REMARK 500 8 SER A 267 46.89 -78.88 REMARK 500 8 SER A 268 -54.71 67.11 REMARK 500 8 ARG A 271 -74.93 68.07 REMARK 500 9 THR A 265 -142.48 -82.56 REMARK 500 9 SER A 273 51.96 -96.33 REMARK 500 10 PRO A 250 68.67 -68.90 REMARK 500 10 ALA A 251 -73.26 -67.26 REMARK 500 10 SER A 267 -141.55 62.94 REMARK 500 10 SER A 270 -130.66 55.97 REMARK 500 10 ALA A 272 -140.07 52.28 REMARK 500 10 PRO A 275 61.35 -64.55 REMARK 500 11 ALA A 251 -150.55 61.15 REMARK 500 11 THR A 265 58.18 33.47 REMARK 500 11 SER A 270 137.32 -173.88 REMARK 500 11 ALA A 272 -137.10 -87.31 REMARK 500 12 MET A 263 56.70 -159.67 REMARK 500 12 ARG A 271 -46.40 69.78 REMARK 500 12 ALA A 272 -135.66 -145.55 REMARK 500 13 THR A 264 46.33 -79.25 REMARK 500 13 SER A 270 -152.43 -104.86 REMARK 500 13 ARG A 271 -50.92 69.93 REMARK 500 14 GLN A 266 -51.77 69.76 REMARK 500 14 SER A 268 52.46 73.56 REMARK 500 14 ARG A 271 49.32 -79.18 REMARK 500 14 SER A 273 -151.53 58.50 REMARK 500 15 PRO A 250 47.85 -72.64 REMARK 500 15 ALA A 251 -115.84 48.88 REMARK 500 15 THR A 265 32.47 -84.91 REMARK 500 16 ALA A 251 -66.59 63.42 REMARK 500 16 THR A 265 49.84 -75.17 REMARK 500 16 SER A 270 -49.33 -147.30 REMARK 500 16 ARG A 271 46.67 -159.41 REMARK 500 17 THR A 264 41.39 -94.24 REMARK 500 17 SER A 267 -125.16 62.61 REMARK 500 17 ARG A 271 -143.71 64.23 REMARK 500 17 SER A 273 -166.79 -167.05 REMARK 500 18 ARG A 252 55.21 -93.96 REMARK 500 18 THR A 264 38.53 -86.72 REMARK 500 18 GLN A 266 -108.21 55.27 REMARK 500 18 SER A 268 46.37 -76.89 REMARK 500 19 GLN A 266 -48.45 -163.43 REMARK 500 19 SER A 268 -154.78 -159.22 REMARK 500 19 SER A 270 -58.05 67.59 REMARK 500 19 ALA A 272 -51.19 68.31 REMARK 500 20 ALA A 251 -101.17 56.68 REMARK 500 20 SER A 267 48.68 -83.75 REMARK 500 20 SER A 270 48.75 -79.00 REMARK 500 20 ARG A 271 132.58 69.83 REMARK 500 20 SER A 273 114.65 -170.91 REMARK 500 20 PRO A 275 -168.75 -61.54 REMARK 500 REMARK 500 REMARK: NULL
DBREF 1MOT A 249 276 UNP P23415 GLRA1_HUMAN 277 304
SEQRES 1 A 28 ALA PRO ALA ARG VAL GLY LEU GLY ILE THR THR VAL LEU SEQRES 2 A 28 THR MET THR THR GLN SER SER GLY SER ARG ALA SER LEU SEQRES 3 A 28 PRO LYS
HELIX 1 1 PRO A 250 THR A 264 1 15
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000