1MFY - Header Asymmetric Unit

HEADER RNA 14-AUG-02 1MFY

TITLE SOLUTION STRUCTURE OF INFLUENZA A VIRUS C4 PROMOTER

COMPND MOL_ID: 1; COMPND 2 MOLECULE: C4 PROMOTER OF INFLUNEZA A VIRUS; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES

SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 OTHER_DETAILS: THIS SEQUENCE OCCURS NATURALLY IN INFLUENZA SOURCE 4 A VIRUS.

KEYWDS INFLUENZA A VIRUS PROMOTER,INTERNAL LOOP, SINGLE ADENINE KEYWDS 2 BULGE, C4, NATURAL VARIANT

EXPDTA SOLUTION NMR

NUMMDL 16

MDLTYP MINIMIZED AVERAGE

AUTHOR M.-K.LEE,S.-H.BAE,C.-J.PARK,H.-K.CHEONG,C.CHEONG,B.-S.CHOI

REVDAT 3 24-FEB-09 1MFY 1 VERSN REVDAT 2 22-JUN-04 1MFY 1 JRNL REVDAT 1 18-SEP-02 1MFY 0

JRNL AUTH M.-K.LEE,S.-H.BAE,C.-J.PARK,H.-K.CHEONG,C.CHEONG, JRNL AUTH 2 B.-S.CHOI JRNL TITL A SINGLE-NUCLEOTIDE NATURAL VARIATION (U4 TO C4) JRNL TITL 2 IN AN INFLUENZA A VIRUS PROMOTER EXHIBITS A LARGE JRNL TITL 3 STRUCTURAL CHANGE: IMPLICATIONS FOR DIFFERENTIAL JRNL TITL 4 VIRAL RNA SYNTHESIS BY RNA-DEPENDENT RNA JRNL TITL 5 POLYMERASE. JRNL REF NUCLEIC ACIDS RES. V. 31 1216 2003 JRNL REFN ISSN 0305-1048 JRNL PMID 12582241 JRNL DOI 10.1093/NAR/GKG214

REMARK 1

REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.

REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER ET AL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE STRUCTURES ARE BASED ON A TOTAL REMARK 3 OF 726 RESTRAINTS, 445 ARE NOE-DERIVED DISTANCE CONSTRAINTS, REMARK 3 196 DIHEDRAL ANGLE RESTRAINTS, 58 HYDROGEN BONDING RESTRAINTS.

REMARK 4 REMARK 4 1MFY COMPLIES WITH FORMAT V. 3.15, 01-DEC-08

REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-AUG-02. REMARK 100 THE RCSB ID CODE IS RCSB016883.

REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : NULL REMARK 210 PH : NULL REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : NULL REMARK 210 SAMPLE CONTENTS : UNLABELED RNA, 1MM; UNLABELED REMARK 210 RNA, 1MM; UNIFORM LABELING REMARK 210 WITH 13C,15N; UNIFORM LABELING REMARK 210 WITH 13C,15N REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D NOESY, DQF-COSY, 3D HCCH- REMARK 210 COSY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ, 600 MHZ REMARK 210 SPECTROMETER MODEL : DRX, INOVA REMARK 210 SPECTROMETER MANUFACTURER : BRUKER, VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CNS 1.0, NMRPIPE 2.1 REMARK 210 METHOD USED : DISTANCE GEOMETRY SIMULATED REMARK 210 ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 16 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL

REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.

REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1M82 RELATED DB: PDB REMARK 900 SOLUTION STRUCTURE OF THE COMPLEMENTARY RNA PROMOTER OF REMARK 900 INFLUENZA A VIRUS

DBREF 1MFY A 1 31 PDB 1MFY 1MFY 1 31

SEQRES 1 A 31 A G U A G A A A C A A G G SEQRES 2 A 31 C U U C G G C C U G C U U SEQRES 3 A 31 U C G C U

CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1

ORIGX1 1.000000 0.000000 0.000000 0.00000

ORIGX2 0.000000 1.000000 0.000000 0.00000

ORIGX3 0.000000 0.000000 1.000000 0.00000

SCALE1 1.000000 0.000000 0.000000 0.00000

SCALE2 0.000000 1.000000 0.000000 0.00000

SCALE3 0.000000 0.000000 1.000000 0.00000