10 20 30 40 50 60 70 80 1MCO - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER IMMUNOGLOBULIN 25-FEB-93 1MCO
TITLE THREE-DIMENSIONAL STRUCTURE OF A HUMAN IMMUNOGLOBULIN WITH A HINGE TITLE 2 DELETION
COMPND MOL_ID: 1; COMPND 2 MOLECULE: IGG1 MCG INTACT ANTIBODY (LIGHT CHAIN); COMPND 3 CHAIN: L; COMPND 4 MOL_ID: 2; COMPND 5 MOLECULE: IGG1 MCG INTACT ANTIBODY (HEAVY CHAIN); COMPND 6 CHAIN: H
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 MOL_ID: 2; SOURCE 6 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 7 ORGANISM_COMMON: HUMAN; SOURCE 8 ORGANISM_TAXID: 9606
KEYWDS IMMUNOGLOBULIN
EXPDTA X-RAY DIFFRACTION
AUTHOR L.W.GUDDAT,A.B.EDMUNDSON
REVDAT 3 13-JUL-11 1MCO 1 VERSN REVDAT 2 24-FEB-09 1MCO 1 VERSN REVDAT 1 31-JAN-94 1MCO 0
JRNL AUTH L.W.GUDDAT,J.N.HERRON,A.B.EDMUNDSON JRNL TITL THREE-DIMENSIONAL STRUCTURE OF A HUMAN IMMUNOGLOBULIN WITH A JRNL TITL 2 HINGE DELETION. JRNL REF PROC.NATL.ACAD.SCI.USA V. 90 4271 1993 JRNL REFN ISSN 0027-8424 JRNL PMID 8483943 JRNL DOI 10.1073/PNAS.90.9.4271
REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH S.S.RAJAN,K.R.ELY,E.E.ABOLA,M.K.WOOD,P.M.COLMAN,R.J.ATHAY, REMARK 1 AUTH 2 A.B.EDMUNDSON REMARK 1 TITL THREE-DIMENSIONAL STRUCTURE OF THE MCG IGG1 IMMUNOGLOBULIN REMARK 1 REF MOL.IMMUNOL. V. 20 787 1983 REMARK 1 REFN ISSN 0161-5890 REMARK 1 REFERENCE 2 REMARK 1 AUTH A.B.EDMUNDSON,K.R.ELY,E.E.ABOLA REMARK 1 TITL CONFORMATIONAL FLEXIBILITY IN IMMUNOGLOBULINS REMARK 1 REF CONTEMP.TOP.MOL.IMMUNOL. V. 7 95 1978 REMARK 1 REFN ISSN 0090-8800 REMARK 1 REFERENCE 3 REMARK 1 AUTH A.B.EDMUNDSON,M.K.WOOD,M.SCHIFFER,K.D.HARDMAN,C.F.AINSWORTH, REMARK 1 AUTH 2 K.R.ELY REMARK 1 TITL A CRYSTALLOGRAPHIC INVESTIGATION OF A HUMAN IGG REMARK 1 TITL 2 IMMUNOGLOBULIN REMARK 1 REF J.BIOL.CHEM. V. 245 2763 1970 REMARK 1 REFN ISSN 0021-9258
REMARK 2 REMARK 2 RESOLUTION. 3.20 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : NULL REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : NULL REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : 0.232 REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4911 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 130 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.022 REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1MCO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: X-PLOR REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.18 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.25 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 93.35000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 93.35000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 44.20000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 55.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 44.20000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 55.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 93.35000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 44.20000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 55.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 93.35000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 44.20000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 55.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 19280 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 64440 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 1.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: L, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 280.05000
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 HIS L 201 NE2 HIS L 201 CD2 -0.067 REMARK 500 LEU H 18 N LEU H 18 CA 0.132 REMARK 500 LEU H 84 CA LEU H 84 CB 0.166 REMARK 500 LEU H 84 CB LEU H 84 CG 0.175 REMARK 500 SER H 85 CA SER H 85 CB 0.116 REMARK 500 HIS H 204 NE2 HIS H 204 CD2 -0.067 REMARK 500 GLU H 243 CD GLU H 243 OE1 -0.072 REMARK 500 HIS H 253 NE2 HIS H 253 CD2 -0.068 REMARK 500 HIS H 295 NE2 HIS H 295 CD2 -0.080 REMARK 500 HIS H 414 NE2 HIS H 414 CD2 -0.079 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP L 28 CA - CB - CG ANGL. DEV. = 14.5 DEGREES REMARK 500 VAL L 29 CG1 - CB - CG2 ANGL. DEV. = -11.0 DEGREES REMARK 500 VAL L 35 CA - CB - CG1 ANGL. DEV. = 10.7 DEGREES REMARK 500 VAL L 35 CA - CB - CG2 ANGL. DEV. = -11.5 DEGREES REMARK 500 TRP L 37 CD1 - CG - CD2 ANGL. DEV. = 5.4 DEGREES REMARK 500 TRP L 37 CE2 - CD2 - CG ANGL. DEV. = -5.8 DEGREES REMARK 500 VAL L 53 CG1 - CB - CG2 ANGL. DEV. = -11.1 DEGREES REMARK 500 VAL L 53 CA - CB - CG1 ANGL. DEV. = 9.8 DEGREES REMARK 500 VAL L 53 CA - CB - CG2 ANGL. DEV. = -10.6 DEGREES REMARK 500 ARG L 56 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 VAL L 60 CA - CB - CG1 ANGL. DEV. = -9.0 DEGREES REMARK 500 TYR L 89 CA - CB - CG ANGL. DEV. = 15.1 DEGREES REMARK 500 CYS L 90 CA - CB - SG ANGL. DEV. = 8.3 DEGREES REMARK 500 VAL L 100 CG1 - CB - CG2 ANGL. DEV. = -10.6 DEGREES REMARK 500 THR L 103 CA - CB - CG2 ANGL. DEV. = 9.0 DEGREES REMARK 500 VAL L 109 CA - CB - CG2 ANGL. DEV. = 9.3 DEGREES REMARK 500 GLN L 112 N - CA - C ANGL. DEV. = 17.1 DEGREES REMARK 500 PRO L 113 C - N - CA ANGL. DEV. = 11.2 DEGREES REMARK 500 ASN L 116 CA - CB - CG ANGL. DEV. = 13.4 DEGREES REMARK 500 PRO L 117 CA - N - CD ANGL. DEV. = -8.7 DEGREES REMARK 500 PRO L 117 N - CA - C ANGL. DEV. = 23.6 DEGREES REMARK 500 ASN L 116 CA - C - N ANGL. DEV. = 18.9 DEGREES REMARK 500 THR L 118 N - CA - C ANGL. DEV. = 21.5 DEGREES REMARK 500 THR L 118 C - N - CA ANGL. DEV. = 16.9 DEGREES REMARK 500 PHE L 122 CA - CB - CG ANGL. DEV. = 14.7 DEGREES REMARK 500 PRO L 123 C - N - CA ANGL. DEV. = 10.7 DEGREES REMARK 500 LEU L 139 CB - CA - C ANGL. DEV. = -13.0 DEGREES REMARK 500 ILE L 140 CA - CB - CG2 ANGL. DEV. = -12.9 DEGREES REMARK 500 SER L 141 CA - C - N ANGL. DEV. = -14.2 DEGREES REMARK 500 SER L 141 O - C - N ANGL. DEV. = 9.6 DEGREES REMARK 500 TRP L 152 CE2 - CD2 - CG ANGL. DEV. = -4.9 DEGREES REMARK 500 HIS L 201 CA - CB - CG ANGL. DEV. = -10.4 DEGREES REMARK 500 VAL L 206 CG1 - CB - CG2 ANGL. DEV. = -9.7 DEGREES REMARK 500 SER L 216 N - CA - C ANGL. DEV. = 19.3 DEGREES REMARK 500 LEU H 2 CA - CB - CG ANGL. DEV. = 14.4 DEGREES REMARK 500 VAL H 3 CG1 - CB - CG2 ANGL. DEV. = -9.6 DEGREES REMARK 500 LEU H 11 CA - CB - CG ANGL. DEV. = 14.8 DEGREES REMARK 500 LEU H 11 CD1 - CG - CD2 ANGL. DEV. = -27.8 DEGREES REMARK 500 PRO H 14 N - CA - C ANGL. DEV. = 16.7 DEGREES REMARK 500 SER H 15 N - CA - C ANGL. DEV. = 20.8 DEGREES REMARK 500 SER H 15 C - N - CA ANGL. DEV. = 16.2 DEGREES REMARK 500 GLU H 16 N - CA - CB ANGL. DEV. = -11.6 DEGREES REMARK 500 GLU H 16 CA - CB - CG ANGL. DEV. = 14.8 DEGREES REMARK 500 ALA H 17 CB - CA - C ANGL. DEV. = 13.0 DEGREES REMARK 500 ALA H 17 N - CA - CB ANGL. DEV. = -21.1 DEGREES REMARK 500 GLU H 16 CA - C - N ANGL. DEV. = 19.9 DEGREES REMARK 500 GLU H 16 O - C - N ANGL. DEV. = -13.7 DEGREES REMARK 500 ALA H 17 C - N - CA ANGL. DEV. = 19.1 DEGREES REMARK 500 LEU H 18 CA - CB - CG ANGL. DEV. = 21.4 DEGREES REMARK 500 LEU H 18 CA - C - O ANGL. DEV. = 13.7 DEGREES REMARK 500 REMARK 500 THIS ENTRY HAS 179 ANGLE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS L 22 103.89 -167.95 REMARK 500 SER L 26 -65.74 -3.01 REMARK 500 SER L 27 -6.08 -58.89 REMARK 500 ASP L 28 -97.91 -123.92 REMARK 500 ALA L 42 88.67 -56.98 REMARK 500 GLU L 52 20.17 33.54 REMARK 500 VAL L 53 102.43 64.99 REMARK 500 PRO L 57 -129.14 -90.78 REMARK 500 SER L 67 -138.70 -151.63 REMARK 500 LEU L 80 156.23 -49.50 REMARK 500 TYR L 93 -165.37 -77.25 REMARK 500 GLU L 94 -21.95 -147.14 REMARK 500 SER L 96 -70.96 47.39 REMARK 500 ASP L 97 -43.37 -137.96 REMARK 500 THR L 118 135.90 58.45 REMARK 500 PRO L 123 -175.98 -30.96 REMARK 500 GLN L 130 -74.49 -55.44 REMARK 500 ASN L 132 102.23 9.95 REMARK 500 LYS L 133 143.57 177.47 REMARK 500 ASP L 142 126.54 58.31 REMARK 500 TYR L 144 58.06 -142.49 REMARK 500 ASP L 155 18.39 80.13 REMARK 500 ALA L 161 159.54 161.39 REMARK 500 LYS L 167 139.01 -36.85 REMARK 500 LYS L 170 142.26 -32.04 REMARK 500 GLN L 171 -169.49 -103.72 REMARK 500 HIS L 201 87.49 -171.98 REMARK 500 LYS L 208 -108.08 -78.97 REMARK 500 THR L 209 119.51 53.36 REMARK 500 PRO L 212 33.11 -95.24 REMARK 500 THR L 213 -169.69 117.21 REMARK 500 CYS L 215 -163.10 25.25 REMARK 500 PRO H 14 116.72 -31.96 REMARK 500 SER H 15 38.76 136.20 REMARK 500 GLU H 16 -112.67 -151.03 REMARK 500 ILE H 29 -92.09 162.37 REMARK 500 ASN H 30 -71.85 80.12 REMARK 500 THR H 31 -47.28 -131.72 REMARK 500 ILE H 32 98.08 -67.92 REMARK 500 LEU H 33 -43.77 142.08 REMARK 500 TYR H 34 -130.98 -143.41 REMARK 500 PRO H 43 90.32 -66.20 REMARK 500 TYR H 55 -38.48 -33.10 REMARK 500 SER H 56 95.34 151.50 REMARK 500 SER H 58 97.19 -162.62 REMARK 500 PRO H 63 -12.26 -43.11 REMARK 500 SER H 64 -76.03 -84.72 REMARK 500 LEU H 65 36.08 -85.40 REMARK 500 SER H 67 -34.65 83.44 REMARK 500 ARG H 68 -78.99 -65.46 REMARK 500 REMARK 500 THIS ENTRY HAS 110 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 TYR L 144 PRO L 145 90.42 REMARK 500 PHE H 150 PRO H 151 -124.25 REMARK 500 GLN H 152 PRO H 153 -112.98 REMARK 500 TYR H 358 PRO H 359 -81.28 REMARK 500 PRO H 380 PRO H 381 -138.98 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR L 144 0.09 SIDE CHAIN REMARK 500 TYR H 54 0.08 SIDE CHAIN REMARK 500 TYR H 96 0.07 SIDE CHAIN REMARK 500 PHE H 126 0.08 SIDE CHAIN REMARK 500 TYR H 334 0.09 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 SER H 15 -12.39 REMARK 500 ALA H 17 16.72 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 GLU L 52 24.6 L L OUTSIDE RANGE REMARK 500 GLN L 112 24.4 L L OUTSIDE RANGE REMARK 500 PRO L 117 21.7 L L OUTSIDE RANGE REMARK 500 THR L 118 20.6 L L OUTSIDE RANGE REMARK 500 LEU L 139 24.9 L L OUTSIDE RANGE REMARK 500 THR L 209 23.1 L L OUTSIDE RANGE REMARK 500 SER L 216 23.3 L L OUTSIDE RANGE REMARK 500 SER H 15 19.6 L L OUTSIDE RANGE REMARK 500 LEU H 84 52.4 L L OUTSIDE RANGE REMARK 500 SER H 86 21.6 L L OUTSIDE RANGE REMARK 500 SER H 116 25.0 L L OUTSIDE RANGE REMARK 500 LEU H 220 22.9 L L OUTSIDE RANGE REMARK 500 ASP H 265 20.9 L L OUTSIDE RANGE REMARK 500 ASN H 282 24.2 L L OUTSIDE RANGE REMARK 500 VAL H 290 24.7 L L OUTSIDE RANGE REMARK 500 ARG H 329 16.1 L L OUTSIDE RANGE REMARK 500 GLU H 415 19.5 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: LC1 REMARK 800 EVIDENCE_CODE: AUTHOR REMARK 800 SITE_DESCRIPTION: ANTIGEN COMBINING SITE 1 IN CHAIN L REMARK 800 REMARK 800 SITE_IDENTIFIER: LC2 REMARK 800 EVIDENCE_CODE: AUTHOR REMARK 800 SITE_DESCRIPTION: ANTIGEN COMBINING SITE 2 IN CHAIN L REMARK 800 REMARK 800 SITE_IDENTIFIER: LC3 REMARK 800 EVIDENCE_CODE: AUTHOR REMARK 800 SITE_DESCRIPTION: ANTIGEN COMBINING SITE 3 IN CHAIN L REMARK 800 REMARK 800 SITE_IDENTIFIER: HC1 REMARK 800 EVIDENCE_CODE: AUTHOR REMARK 800 SITE_DESCRIPTION: ANTIGEN COMBINING SITE 1 IN CHAIN H REMARK 800 REMARK 800 SITE_IDENTIFIER: HC2 REMARK 800 EVIDENCE_CODE: AUTHOR REMARK 800 SITE_DESCRIPTION: ANTIGEN COMBINING SITE 2 IN CHAIN H REMARK 800 REMARK 800 SITE_IDENTIFIER: HC3 REMARK 800 EVIDENCE_CODE: AUTHOR REMARK 800 SITE_DESCRIPTION: ANTIGEN COMBINING SITE 3 IN CHAIN H REMARK 800 REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAG H 429 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FUL H 430 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAG H 431 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BMA H 432 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MAN H 433 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAG H 434 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GAL H 435 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SIA H 436 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GUP H 437 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAG H 438
REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE FOLLOWING TABLE MAY BE USED TO RELATE THE ENTRIES REMARK 999 SEQUENCE NUMBERING TO THE NUMBERING SYSTEM OF E.KABAT REMARK 999 (E.A.KABAT,T.T.WU,M.REID-MILLER,H.M.PERRY,K.S.GOTTESMAN, REMARK 999 SEQUENCES OF PROTEINS OF IMMUNOLOGICAL INTEREST, 4TH ED., REMARK 999 (1987), NATIONAL INSTITUTE OF HEALTH,BETHESDA,MD.). REMARK 999 REMARK 999 LIGHT CHAIN HEAVY CHAIN REMARK 999 REMARK 999 COMPUTER KABAT COMPUTER KABAT REMARK 999 FILE NUMBER FILE NUMBER REMARK 999 NUMBER NUMBER REMARK 999 REMARK 999 1-9 1-9 1-35 1-35 REMARK 999 10-26 11-27 36 35A REMARK 999 27 27A 37 35B REMARK 999 28 27B 38-84 36-82 REMARK 999 29 27C 85 82A REMARK 999 30-97 28-95 86 82B REMARK 999 110 106A 87 82C REMARK 999 111-172 107-168 88-103 83-98 REMARK 999 173-203 170-200 104 100K REMARK 999 204 203-215 105-134 101-130 REMARK 999 135-156 133-154 REMARK 999 157-158 158-159 REMARK 999 159-166 162-169 REMARK 999 167-177 171-181 REMARK 999 178-191 183-196 REMARK 999 192-194 198-200 REMARK 999 195-199 202-206 REMARK 999 200-216 208-224 REMARK 999 217-222 231-237 REMARK 999 (EU REMARK 999 NUMBERING) REMARK 999 223-428 238-443 REMARK 999 (EU REMARK 999 NUMBERING)
DBREF 1MCO L 2 216 PIR S14675 S14675 21 235 DBREF 1MCO H 3 428 GB 243866 AAB21181 21 466
SEQADV 1MCO ILE L 20 PIR S14675 PHE 39 CONFLICT SEQADV 1MCO THR L 23 PIR S14675 SER 42 CONFLICT SEQADV 1MCO VAL L 29 PIR S14675 ILE 48 CONFLICT SEQADV 1MCO GLY L 31 PIR S14675 ASN 50 CONFLICT SEQADV 1MCO GLN L 39 PIR S14675 ARG 58 CONFLICT SEQADV 1MCO ALA L 42 PIR S14675 PRO 61 CONFLICT SEQADV 1MCO VAL L 48 PIR S14675 LEU 67 CONFLICT SEQADV 1MCO ILE L 49 PIR S14675 MET 68 CONFLICT SEQADV 1MCO ASN L 54 PIR S14675 THR 73 CONFLICT SEQADV 1MCO ASP L 62 PIR S14675 ASN 81 CONFLICT SEQADV 1MCO GLU L 94 PIR S14675 ALA 113 CONFLICT SEQADV 1MCO ASP L 97 PIR S14675 ASN 116 CONFLICT SEQADV 1MCO ASN L 98 PIR S14675 SER 117 CONFLICT SEQADV 1MCO PHE L 99 PIR S14675 LEU 118 CONFLICT SEQADV 1MCO VAL L 100 PIR S14675 ILE 119 CONFLICT SEQADV 1MCO THR L 103 PIR S14675 GLY 122 CONFLICT SEQADV 1MCO LYS L 106 PIR S14675 ARG 125 CONFLICT SEQADV 1MCO VAL L 107 PIR S14675 LEU 126 CONFLICT SEQADV 1MCO ASN L 116 PIR S14675 ALA 135 CONFLICT SEQADV 1MCO THR L 118 PIR S14675 SER 137 CONFLICT SEQADV 1MCO GLU L 136 PIR S14675 LEU 155 CONFLICT SEQADV 1MCO GLY L 156 PIR S14675 SER 175 CONFLICT SEQADV 1MCO LYS L 167 PIR S14675 THR 186 CONFLICT SEQADV 1MCO H GB 243866 GLN 22 DELETION SEQADV 1MCO LYS H 13 GB 243866 ARG 32 CONFLICT SEQADV 1MCO GLU H 16 GB 243866 GLN 35 CONFLICT SEQADV 1MCO ALA H 17 GB 243866 THR 36 CONFLICT SEQADV 1MCO ASP H 27 GB 243866 INSERTION SEQADV 1MCO SER H 28 GB 243866 PHE 46 CONFLICT SEQADV 1MCO ILE H 29 GB 243866 THR 47 CONFLICT SEQADV 1MCO ASN H 30 GB 243866 PHE 48 CONFLICT SEQADV 1MCO ILE H 32 GB 243866 INSERTION SEQADV 1MCO LEU H 33 GB 243866 ASP 50 CONFLICT SEQADV 1MCO TYR H 34 GB 243866 PHE 51 CONFLICT SEQADV 1MCO TRP H 36 GB 243866 MET 53 CONFLICT SEQADV 1MCO SER H 37 GB 243866 ASN 54 CONFLICT SEQADV 1MCO ILE H 39 GB 243866 VAL 56 CONFLICT SEQADV 1MCO LYS H 45 GB 243866 ARG 62 CONFLICT SEQADV 1MCO TYR H 52 GB 243866 PHE 69 CONFLICT SEQADV 1MCO H GB 243866 ARG 71 DELETION SEQADV 1MCO H GB 243866 ASP 72 DELETION SEQADV 1MCO TYR H 54 GB 243866 LYS 73 CONFLICT SEQADV 1MCO TYR H 55 GB 243866 ALA 74 CONFLICT SEQADV 1MCO SER H 56 GB 243866 LYS 75 CONFLICT SEQADV 1MCO SER H 58 GB 243866 TYR 77 CONFLICT SEQADV 1MCO H GB 243866 THR 79 DELETION SEQADV 1MCO H GB 243866 GLU 80 DELETION SEQADV 1MCO GLY H 61 GB 243866 INSERTION SEQADV 1MCO LEU H 65 GB 243866 VAL 85 CONFLICT SEQADV 1MCO SER H 67 GB 243866 GLY 87 CONFLICT SEQADV 1MCO ILE H 71 GB 243866 MET 91 CONFLICT SEQADV 1MCO SER H 72 GB 243866 LEU 92 CONFLICT SEQADV 1MCO ASN H 74 GB 243866 ASP 94 CONFLICT SEQADV 1MCO TYR H 81 GB 243866 SER 101 CONFLICT SEQADV 1MCO SER H 82 GB 243866 LEU 102 CONFLICT SEQADV 1MCO LYS H 83 GB 243866 ARG 103 CONFLICT SEQADV 1MCO VAL H 100 GB 243866 GLU 120 CONFLICT SEQADV 1MCO PRO H 101 GB 243866 GLY 121 CONFLICT SEQADV 1MCO LEU H 102 GB 243866 HIS 122 CONFLICT SEQADV 1MCO VAL H 103 GB 243866 THR 123 CONFLICT SEQADV 1MCO VAL H 104 GB 243866 ALA 124 CONFLICT SEQADV 1MCO ASN H 105 GB 243866 ALA 125 CONFLICT SEQADV 1MCO H GB 243866 PHE 127 DELETION SEQADV 1MCO H GB 243866 ASP 128 DELETION SEQADV 1MCO H GB 243866 TYR 129 DELETION SEQADV 1MCO THR H 111 GB 243866 SER 134 CONFLICT SEQADV 1MCO GLN H 152 GB 243866 GLU 175 CONFLICT SEQADV 1MCO ARG H 214 GB 243866 LYS 237 CONFLICT SEQADV 1MCO H GB 243866 GLU 239 DELETION SEQADV 1MCO H GB 243866 PRO 240 DELETION SEQADV 1MCO H GB 243866 LYS 241 DELETION SEQADV 1MCO H GB 243866 SER 242 DELETION SEQADV 1MCO H GB 243866 CYS 243 DELETION SEQADV 1MCO H GB 243866 ASP 244 DELETION SEQADV 1MCO H GB 243866 LYS 245 DELETION SEQADV 1MCO H GB 243866 THR 246 DELETION SEQADV 1MCO H GB 243866 HIS 247 DELETION SEQADV 1MCO H GB 243866 THR 248 DELETION SEQADV 1MCO H GB 243866 CYS 249 DELETION SEQADV 1MCO H GB 243866 PRO 250 DELETION SEQADV 1MCO H GB 243866 PRO 251 DELETION SEQADV 1MCO H GB 243866 CYS 252 DELETION SEQADV 1MCO H GB 243866 PRO 253 DELETION SEQADV 1MCO GLN H 257 GB 243866 GLU 295 CONFLICT SEQADV 1MCO GLN H 268 GB 243866 GLU 306 CONFLICT SEQADV 1MCO GLN H 279 GB 243866 GLU 317 CONFLICT SEQADV 1MCO ASN H 297 GB 243866 ASP 335 CONFLICT SEQADV 1MCO ASP H 300 GB 243866 ASN 338 CONFLICT SEQADV 1MCO GLU H 341 GB 243866 ASP 379 CONFLICT SEQADV 1MCO MET H 343 GB 243866 LEU 381 CONFLICT
SEQRES 1 L 216 PRO SER ALA LEU THR GLN PRO PRO SER ALA SER GLY SER SEQRES 2 L 216 LEU GLY GLN SER VAL THR ILE SER CYS THR GLY THR SER SEQRES 3 L 216 SER ASP VAL GLY GLY TYR ASN TYR VAL SER TRP TYR GLN SEQRES 4 L 216 GLN HIS ALA GLY LYS ALA PRO LYS VAL ILE ILE TYR GLU SEQRES 5 L 216 VAL ASN LYS ARG PRO SER GLY VAL PRO ASP ARG PHE SER SEQRES 6 L 216 GLY SER LYS SER GLY ASN THR ALA SER LEU THR VAL SER SEQRES 7 L 216 GLY LEU GLN ALA GLU ASP GLU ALA ASP TYR TYR CYS SER SEQRES 8 L 216 SER TYR GLU GLY SER ASP ASN PHE VAL PHE GLY THR GLY SEQRES 9 L 216 THR LYS VAL THR VAL LEU GLY GLN PRO LYS ALA ASN PRO SEQRES 10 L 216 THR VAL THR LEU PHE PRO PRO SER SER GLU GLU LEU GLN SEQRES 11 L 216 ALA ASN LYS ALA THR GLU VAL CYS LEU ILE SER ASP PHE SEQRES 12 L 216 TYR PRO GLY ALA VAL THR VAL ALA TRP LYS ALA ASP GLY SEQRES 13 L 216 SER PRO VAL LYS ALA GLY VAL GLU THR THR LYS PRO SER SEQRES 14 L 216 LYS GLN SER ASN ASN LYS TYR ALA ALA SER SER TYR LEU SEQRES 15 L 216 SER LEU THR PRO GLU GLN TRP LYS SER HIS ARG SER TYR SEQRES 16 L 216 SER CYS GLN VAL THR HIS GLU GLY SER THR VAL GLU LYS SEQRES 17 L 216 THR VAL ALA PRO THR GLU CYS SER SEQRES 1 H 428 PRO LEU VAL LEU GLN GLU SER GLY PRO GLY LEU VAL LYS SEQRES 2 H 428 PRO SER GLU ALA LEU SER LEU THR CYS THR VAL SER GLY SEQRES 3 H 428 ASP SER ILE ASN THR ILE LEU TYR TYR TRP SER TRP ILE SEQRES 4 H 428 ARG GLN PRO PRO GLY LYS GLY LEU GLU TRP ILE GLY TYR SEQRES 5 H 428 ILE TYR TYR SER GLY SER THR TYR GLY ASN PRO SER LEU SEQRES 6 H 428 LYS SER ARG VAL THR ILE SER VAL ASN THR SER LYS ASN SEQRES 7 H 428 GLN PHE TYR SER LYS LEU SER SER VAL THR ALA ALA ASP SEQRES 8 H 428 THR ALA VAL TYR TYR CYS ALA ARG VAL PRO LEU VAL VAL SEQRES 9 H 428 ASN PRO TRP GLY GLN GLY THR LEU VAL THR VAL SER SER SEQRES 10 H 428 ALA SER THR LYS GLY PRO SER VAL PHE PRO LEU ALA PRO SEQRES 11 H 428 SER SER LYS SER THR SER GLY GLY THR ALA ALA LEU GLY SEQRES 12 H 428 CYS LEU VAL LYS ASP TYR PHE PRO GLN PRO VAL THR VAL SEQRES 13 H 428 SER TRP ASN SER GLY ALA LEU THR SER GLY VAL HIS THR SEQRES 14 H 428 PHE PRO ALA VAL LEU GLN SER SER GLY LEU TYR SER LEU SEQRES 15 H 428 SER SER VAL VAL THR VAL PRO SER SER SER LEU GLY THR SEQRES 16 H 428 GLN THR TYR ILE CYS ASN VAL ASN HIS LYS PRO SER ASN SEQRES 17 H 428 THR LYS VAL ASP LYS ARG VAL ALA PRO GLU LEU LEU GLY SEQRES 18 H 428 GLY PRO SER VAL PHE LEU PHE PRO PRO LYS PRO LYS ASP SEQRES 19 H 428 THR LEU MET ILE SER ARG THR PRO GLU VAL THR CYS VAL SEQRES 20 H 428 VAL VAL ASP VAL SER HIS GLU ASP PRO GLN VAL LYS PHE SEQRES 21 H 428 ASN TRP TYR VAL ASP GLY VAL GLN VAL HIS ASN ALA LYS SEQRES 22 H 428 THR LYS PRO ARG GLU GLN GLN TYR ASN SER THR TYR ARG SEQRES 23 H 428 VAL VAL SER VAL LEU THR VAL LEU HIS GLN ASN TRP LEU SEQRES 24 H 428 ASP GLY LYS GLU TYR LYS CYS LYS VAL SER ASN LYS ALA SEQRES 25 H 428 LEU PRO ALA PRO ILE GLU LYS THR ILE SER LYS ALA LYS SEQRES 26 H 428 GLY GLN PRO ARG GLU PRO GLN VAL TYR THR LEU PRO PRO SEQRES 27 H 428 SER ARG GLU GLU MET THR LYS ASN GLN VAL SER LEU THR SEQRES 28 H 428 CYS LEU VAL LYS GLY PHE TYR PRO SER ASP ILE ALA VAL SEQRES 29 H 428 GLU TRP GLU SER ASN GLY GLN PRO GLU ASN ASN TYR LYS SEQRES 30 H 428 THR THR PRO PRO VAL LEU ASP SER ASP GLY SER PHE PHE SEQRES 31 H 428 LEU TYR SER LYS LEU THR VAL ASP LYS SER ARG TRP GLN SEQRES 32 H 428 GLN GLY ASN VAL PHE SER CYS SER VAL MET HIS GLU ALA SEQRES 33 H 428 LEU HIS ASN HIS TYR THR GLN LYS SER LEU SER LEU
MODRES 1MCO ASN H 282 ASN GLYCOSYLATION SITE
HET NAG H 429 14 HET FUL H 430 10 HET NAG H 431 14 HET BMA H 432 11 HET MAN H 433 11 HET NAG H 434 14 HET GAL H 435 11 HET SIA H 436 20 HET GUP H 437 11 HET NAG H 438 14
HETNAM NAG N-ACETYL-D-GLUCOSAMINE HETNAM FUL BETA-L-FUCOSE HETNAM BMA BETA-D-MANNOSE HETNAM MAN ALPHA-D-MANNOSE HETNAM GAL BETA-D-GALACTOSE HETNAM SIA O-SIALIC ACID HETNAM GUP ALPHA-L-GULOPYRANOSIDE
HETSYN FUL 6-DEOXY-BETA-L-GALACTOSE
FORMUL 3 NAG 4(C8 H15 N O6) FORMUL 3 FUL C6 H12 O5 FORMUL 3 BMA C6 H12 O6 FORMUL 3 MAN C6 H12 O6 FORMUL 3 GAL C6 H12 O6 FORMUL 3 SIA C11 H19 N O9 FORMUL 4 GUP C6 H12 O6
HELIX 1 1 SER L 125 GLN L 130 1 6 HELIX 2 2 THR L 185 HIS L 192 1 8 HELIX 3 3 LYS H 231 MET H 237 1 7 HELIX 4 4 HIS H 295 ASP H 300 1 6 HELIX 5 5 SER H 339 MET H 343 5 5 HELIX 6 6 ASP H 398 GLN H 403 1 6
SHEET 1 L1 4 LEU L 4 GLN L 6 0 SHEET 2 L1 4 SER L 17 GLY L 24 -1 O THR L 23 N THR L 5 SHEET 3 L1 4 ASN L 71 SER L 78 -1 O VAL L 77 N VAL L 18 SHEET 4 L1 4 PHE L 64 GLY L 70 -1 N SER L 65 O THR L 76 SHEET 1 L2 6 PRO L 7 SER L 13 0 SHEET 2 L2 6 ASN L 98 GLY L 111 1 O LYS L 106 N ALA L 10 SHEET 3 L2 6 GLU L 85 GLY L 95 -1 N GLU L 94 O ASN L 98 SHEET 4 L2 6 ASN L 33 ALA L 42 -1 O SER L 36 N SER L 91 SHEET 5 L2 6 GLY L 43 VAL L 53 -1 N GLU L 52 O VAL L 35 SHEET 6 L2 6 ASN L 54 ARG L 56 -1 O LYS L 55 N TYR L 51 SHEET 1 L3 4 PRO L 117 SER L 125 0 SHEET 2 L3 4 LYS L 133 SER L 141 -1 N SER L 141 O THR L 118 SHEET 3 L3 4 ALA L 177 LEU L 184 -1 O LEU L 184 N ALA L 134 SHEET 4 L3 4 ALA L 161 LYS L 167 -1 O GLY L 162 N SER L 183 SHEET 1 L4 3 VAL L 148 GLY L 156 0 SHEET 2 L4 3 ARG L 193 GLU L 202 -1 O THR L 200 N THR L 149 SHEET 3 L4 3 GLY L 203 THR L 209 -1 O SER L 204 N HIS L 201 SHEET 1 H1 4 LEU H 4 GLY H 8 0 SHEET 2 H1 4 ALA H 17 SER H 25 -1 O THR H 23 N GLN H 5 SHEET 3 H1 4 LYS H 77 SER H 85 -1 O PHE H 80 N CYS H 22 SHEET 4 H1 4 SER H 67 THR H 75 -1 N SER H 72 O TYR H 81 SHEET 1 H2 6 PRO H 9 LYS H 13 0 SHEET 2 H2 6 LEU H 102 SER H 117 1 N THR H 114 O GLY H 10 SHEET 3 H2 6 THR H 92 LEU H 102 -1 N ALA H 93 O VAL H 113 SHEET 4 H2 6 LEU H 33 PRO H 43 -1 O TYR H 35 N VAL H 100 SHEET 5 H2 6 GLY H 44 SER H 56 -1 N LYS H 45 O PRO H 42 SHEET 6 H2 6 GLY H 57 PRO H 63 -1 O SER H 58 N TYR H 54 SHEET 1 H3 4 PRO H 123 ALA H 129 0 SHEET 2 H3 4 THR H 139 TYR H 149 -1 O LYS H 147 N SER H 124 SHEET 3 H3 4 GLY H 178 PRO H 189 -1 O TYR H 180 N ASP H 148 SHEET 4 H3 4 SER H 165 SER H 176 -1 N GLN H 175 O LEU H 179 SHEET 1 H4 3 VAL H 154 ALA H 162 0 SHEET 2 H4 3 GLN H 196 LYS H 205 -1 O ASN H 203 N THR H 155 SHEET 3 H4 3 ASN H 208 ARG H 214 -1 O THR H 209 N HIS H 204 SHEET 1 H5 4 PRO H 223 PRO H 229 0 SHEET 2 H5 4 THR H 241 ASP H 250 -1 O VAL H 249 N SER H 224 SHEET 3 H5 4 SER H 283 LEU H 294 -1 O VAL H 287 N VAL H 248 SHEET 4 H5 4 THR H 274 ASN H 282 -1 O TYR H 281 N THR H 284 SHEET 1 H6 4 GLY H 266 HIS H 270 0 SHEET 2 H6 4 VAL H 258 GLY H 266 -1 N TRP H 262 O VAL H 269 SHEET 3 H6 4 LYS H 302 ASN H 310 -1 O GLU H 303 N ASP H 265 SHEET 4 H6 4 PRO H 316 SER H 322 -1 O ILE H 321 N TYR H 304 SHEET 1 H7 4 PRO H 328 MET H 343 0 SHEET 2 H7 4 THR H 344 PRO H 359 -1 N TYR H 358 O ARG H 329 SHEET 3 H7 4 GLY H 387 SER H 400 -1 O PHE H 389 N GLY H 356 SHEET 4 H7 4 ASN H 374 SER H 385 -1 N ASP H 384 O SER H 388 SHEET 1 H8 4 TYR H 421 SER H 427 0 SHEET 2 H8 4 VAL H 407 HIS H 414 -1 O VAL H 412 N THR H 422 SHEET 3 H8 4 ILE H 362 ASN H 369 -1 O ALA H 363 N MET H 413 SHEET 4 H8 4 GLY H 370 ASN H 374 -1 O GLN H 371 N SER H 368
SSBOND 1 CYS L 22 CYS L 90 1555 1555 2.03 SSBOND 2 CYS L 138 CYS L 197 1555 1555 2.01 SSBOND 3 CYS L 215 CYS L 215 1555 3556 2.25 SSBOND 4 CYS H 22 CYS H 97 1555 1555 2.01 SSBOND 5 CYS H 144 CYS H 200 1555 1555 2.00 SSBOND 6 CYS H 246 CYS H 306 1555 1555 2.02 SSBOND 7 CYS H 352 CYS H 410 1555 1555 2.03
LINK ND2 ASN H 282 C1 NAG H 429 1555 1555 1.41 LINK O4 NAG H 429 C1 NAG H 431 1555 1555 1.42 LINK O6 NAG H 429 C1 FUL H 430 1555 1555 1.46 LINK O4 NAG H 431 C1 BMA H 432 1555 1555 1.45 LINK O3 BMA H 432 C1 GUP H 437 1555 1555 1.72 LINK O6 BMA H 432 C1 MAN H 433 1555 1555 1.50 LINK O2 MAN H 433 C1 NAG H 434 1555 1555 1.47 LINK O4 NAG H 434 C1 GAL H 435 1555 1555 1.47 LINK O3 GAL H 435 C2 SIA H 436 1555 1555 1.49 LINK O2 GUP H 437 C1 NAG H 438 1555 1555 1.41 LINK ND2 ASN H 282 C2 NAG H 429 1555 1555 1.96
SITE 1 LC1 14 THR L 23 GLY L 24 THR L 25 SER L 26 SITE 2 LC1 14 SER L 27 ASP L 28 VAL L 29 GLY L 30 SITE 3 LC1 14 GLY L 31 TYR L 32 ASN L 33 TYR L 34 SITE 4 LC1 14 VAL L 35 SER L 36 SITE 1 LC2 7 GLU L 52 VAL L 53 ASN L 54 LYS L 55 SITE 2 LC2 7 ARG L 56 PRO L 57 SER L 58 SITE 1 LC3 10 SER L 91 SER L 92 TYR L 93 GLU L 94 SITE 2 LC3 10 GLY L 95 SER L 96 ASP L 97 ASN L 98 SITE 3 LC3 10 PHE L 99 VAL L 100 SITE 1 HC1 7 THR H 31 ILE H 32 LEU H 33 TYR H 34 SITE 2 HC1 7 TYR H 35 TRP H 36 SER H 37 SITE 1 HC2 14 TYR H 52 ILE H 53 TYR H 54 TYR H 55 SITE 2 HC2 14 SER H 56 GLY H 57 SER H 58 THR H 59 SITE 3 HC2 14 TYR H 60 GLY H 61 ASN H 62 PRO H 63 SITE 4 HC2 14 SER H 64 LEU H 65 SITE 1 HC3 7 VAL H 100 PRO H 101 LEU H 102 VAL H 103 SITE 2 HC3 7 VAL H 104 ASN H 105 PRO H 106 SITE 1 AC1 6 ASP H 250 ASN H 282 SER H 283 THR H 284 SITE 2 AC1 6 FUL H 430 NAG H 431 SITE 1 AC2 3 TYR H 281 ASN H 282 NAG H 429 SITE 1 AC3 6 VAL H 249 ASP H 250 NAG H 429 BMA H 432 SITE 2 AC3 6 MAN H 433 GUP H 437 SITE 1 AC4 7 PHE H 226 PHE H 228 VAL H 249 NAG H 431 SITE 2 AC4 7 MAN H 433 GUP H 437 NAG H 438 SITE 1 AC5 5 PHE H 228 ARG H 286 NAG H 431 BMA H 432 SITE 2 AC5 5 NAG H 434 SITE 1 AC6 7 PHE H 228 THR H 245 VAL H 247 ARG H 286 SITE 2 AC6 7 VAL H 288 MAN H 433 GAL H 435 SITE 1 AC7 6 PRO H 229 GLU H 243 THR H 245 VAL H 288 SITE 2 AC7 6 NAG H 434 SIA H 436 SITE 1 AC8 8 THR H 241 PRO H 242 GLU H 243 THR H 245 SITE 2 AC8 8 VAL H 290 LEU H 291 THR H 292 GAL H 435 SITE 1 AC9 7 SER H 224 VAL H 225 PHE H 226 LYS H 319 SITE 2 AC9 7 NAG H 431 BMA H 432 NAG H 438 SITE 1 BC1 4 PHE H 226 LYS H 319 BMA H 432 GUP H 437
CRYST1 88.400 110.000 186.700 90.00 90.00 90.00 C 2 2 21 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.011312 0.000000 0.000000 0.00000
SCALE2 0.000000 0.009091 0.000000 0.00000
SCALE3 0.000000 0.000000 0.005356 0.00000