1M82 - Header Asymmetric Unit

HEADER RNA 24-JUL-02 1M82

TITLE SOLUTION STRUCTURE OF THE COMPLEMENTARY RNA PROMOTER OF TITLE 2 INFLUENZA A VIRUS

COMPND MOL_ID: 1; COMPND 2 MOLECULE: RNA (25-MER): THE COMPLEMENTARY RNA PROMOTER OF COMPND 3 INFLUENZA A VIRUS; COMPND 4 CHAIN: A; COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: CONSERVED INTERNAL LOOP OF THE COMPND 7 COMPLEMENTARY RNA PROMOTER OF THE INFLUENZA A VIRUS

SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 OTHER_DETAILS: THIS SEQUENCE OCCURS NATURALLY IN SOURCE 4 COMPLEMENTARY RNA OF THE INFLUENZA A VIRUS GENOME SEGMENTS.

KEYWDS ASYMMETRIC INTERNAL LOOP, A-FORM HELIX

EXPDTA SOLUTION NMR

NUMMDL 31

AUTHOR C.-J.PARK,S.-H.BAE,M.-K.LEE,G.VARANI,B.-S.CHOI

REVDAT 2 24-FEB-09 1M82 1 VERSN REVDAT 1 03-JUN-03 1M82 0

JRNL AUTH C.-J.PARK,S.-H.BAE,M.-K.LEE,G.VARANI,B.-S.CHOI JRNL TITL SOLUTION STRUCTURE OF THE INFLUENZA A VIRUS CRNA JRNL TITL 2 PROMOTER: IMPLICATIONS FOR DIFFERENTIAL JRNL TITL 3 RECOGNITION OF VIRAL PROMOTER STRUCTURES BY JRNL TITL 4 RNA-DEPENDENT RNA POLYMERASE JRNL REF NUCLEIC ACIDS RES. V. 31 2824 2003 JRNL REFN ISSN 0305-1048 JRNL PMID 12771209 JRNL DOI 10.1093/NAR/GKG387

REMARK 1

REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.

REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE STRUCTURES ARE BASED ON A TOTAL REMARK 3 OF 834 RESTRAINTS, 592 ARE NOE-DERIVED DISTANCE RESTRAINTS, REMARK 3 140 TORSION ANGLE RESTRAINTS, 54 PLANARITY RESTRAINTS AND 48 REMARK 3 BASE-PAIR RESTRAINTS.

REMARK 4 REMARK 4 1M82 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08

REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-AUG-02. REMARK 100 THE RCSB ID CODE IS RCSB016712.

REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 300; 280; 290; 310 REMARK 210 PH : 6.0; 6.0; 6.0; 6.0 REMARK 210 IONIC STRENGTH : 20MM NAPI 0.1MM EDTA; 20MM REMARK 210 NAPI 0.1MM EDTA; 20MM NAPI REMARK 210 0.1MM EDTA; 20MM NAPI 0.1MM REMARK 210 EDTA REMARK 210 PRESSURE : AMBIENT; AMBIENT; AMBIENT; REMARK 210 AMBIENT REMARK 210 SAMPLE CONTENTS : 1MM INFLUENZA A VIRUS CRNA REMARK 210 PROMOTER (25MER) 20MM REMARK 210 PHOSPHATE BUFFER(PH 6.0)0.1MM REMARK 210 EDTA; 1MM INFLUENZA A VIRUS REMARK 210 CRNA PROMOTER (25MER) U-15N, REMARK 210 13C; 20MM PHOSPHATE BUFFER(PH REMARK 210 6.0)0.1MM EDTA REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D NOESY, 2D TOCSY, DQF-COSY, REMARK 210 HETCOR, 3D 13C NOESY-HSQC, 3D REMARK 210 HCCH-COSY, 3D HCCH-COSY-TOCSY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ, 800 MHZ, 500 MHZ REMARK 210 SPECTROMETER MODEL : DMX, AMX, INOVA REMARK 210 SPECTROMETER MANUFACTURER : BRUKER, VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : FELIX 95, VNMR 6.1C, CNS 1.0 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 31 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS, REMARK 210 STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 21 REMARK 210 REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED USING 3D HETERONUCLEAR NMR REMARK 210 SPECTROSCOPY.

REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.

DBREF 1M82 A 1 25 PDB 1M82 1M82 1 25

SEQRES 1 A 25 G G A A G C A G G C U U C SEQRES 2 A 25 G G C C U U G U U U C C

CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1

ORIGX1 1.000000 0.000000 0.000000 0.00000

ORIGX2 0.000000 1.000000 0.000000 0.00000

ORIGX3 0.000000 0.000000 1.000000 0.00000

SCALE1 1.000000 0.000000 0.000000 0.00000

SCALE2 0.000000 1.000000 0.000000 0.00000

SCALE3 0.000000 0.000000 1.000000 0.00000