1M7J - Header Asymmetric Unit

HEADER HYDROLASE 22-JUL-02 1M7J

TITLE CRYSTAL STRUCTURE OF D-AMINOACYLASE DEFINES A NOVEL SUBSET TITLE 2 OF AMIDOHYDROLASES

COMPND MOL_ID: 1; COMPND 2 MOLECULE: D-AMINOACYLASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: N-ACYL-D-AMINO ACID AMIDOHYDROLASE; COMPND 5 EC: 3.5.1.81; COMPND 6 ENGINEERED: YES

SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ALCALIGENES FAECALIS; SOURCE 3 ORGANISM_TAXID: 511; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: M15; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PQE

KEYWDS TIN-BARREL, METAL-DEPENDENT AMIDOHYDROLASE

EXPDTA X-RAY DIFFRACTION

AUTHOR S.-H.LIAW,S.-J.CHEN,T.-P.KO,C.-S.HSU,A.H.-J.WANG,Y.-C.TSAI

REVDAT 2 24-FEB-09 1M7J 1 VERSN REVDAT 1 25-FEB-03 1M7J 0

JRNL AUTH S.-H.LIAW,S.-J.CHEN,T.-P.KO,C.-S.HSU,C.J.CHEN, JRNL AUTH 2 A.H.WANG,Y.-C.TSAI JRNL TITL CRYSTAL STRUCTURE OF D-AMINOACYLASE FROM JRNL TITL 2 ALCALIGENES FAECALIS DA1. A NOVEL SUBSET OF JRNL TITL 3 AMIDOHYDROLASES AND INSIGHTS INTO THE ENZYME JRNL TITL 4 MECHANISM. JRNL REF J.BIOL.CHEM. V. 278 4957 2003 JRNL REFN ISSN 0021-9258 JRNL PMID 12454005 JRNL DOI 10.1074/JBC.M210795200

REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH C.-S.HSU,W.-L.LAI,W.-W.CHANG,S.-H.LIAW,Y.-C.TSAI REMARK 1 TITL STRUCTURAL-BASED MUTATIONAL ANALYSIS OF REMARK 1 TITL 2 D-AMINOACYLASE FROM ALCALIGENES FAECALIS DA1. REMARK 1 REF PROTEIN SCI. V. 11 2545 2002 REMARK 1 REFN ISSN 0961-8368 REMARK 1 DOI 10.1110/PS.0220902 REMARK 1 REFERENCE 2 REMARK 1 AUTH C.-S.HSU,S.-J.CHEN,Y.-C.TSAI,T.-W.LIN,S.-H.LIAW, REMARK 1 AUTH 2 A.H.WANG REMARK 1 TITL CRYSTALLIZATION AND PRELIMINARY CRYSTALLOGRAPHIC REMARK 1 TITL 2 ANALYSIS OF A D-AMINOACYLASE FROM ALCALIGENES REMARK 1 TITL 3 FAECALIS DA1 REMARK 1 REF ACTA CRYSTALLOGR.,SECT.D V. 58 1482 2002 REMARK 1 REFN ISSN 0907-4449

REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS.

REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 98.4 REMARK 3 NUMBER OF REFLECTIONS : 100057 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.160 REMARK 3 FREE R VALUE : 0.174 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 5056 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.55 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.00 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.1590 REMARK 3 BIN FREE R VALUE : 0.1730 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3589 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 10 REMARK 3 SOLVENT ATOMS : 503 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 10.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.13 REMARK 3 ESD FROM SIGMAA (A) : -0.06 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.15 REMARK 3 ESD FROM C-V SIGMAA (A) : -0.05 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.015 REMARK 3 BOND ANGLES (DEGREES) : 1.77 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL

REMARK 4 REMARK 4 1M7J COMPLIES WITH FORMAT V. 3.15, 01-DEC-08

REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 23-JUL-02. REMARK 100 THE RCSB ID CODE IS RCSB016693.

REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-APR-02; 05-MAR-02 REMARK 200 TEMPERATURE (KELVIN) : 100; 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : SPRING-8; PHOTON FACTORY REMARK 200 BEAMLINE : BL41XU; BL-18B REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; NULL REMARK 200 WAVELENGTH OR RANGE (A) : 1.0; 0.9197 REMARK 200 MONOCHROMATOR : ROTATED-INCLINED DOUBLE- REMARK 200 CRYSTAL MONOCHROMATOR; NULL REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4; ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 100783 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 6.300 REMARK 200 R MERGE (I) : 0.04700 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 50.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.55 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.60 REMARK 200 R MERGE FOR SHELL (I) : 0.11600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 17.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: CNS, ARP/WARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL

REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.79 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.74 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SODIUM CITRATE, AMMONIUM ACETATE, REMARK 280 PEG 4000, PH 5.6, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 295K

REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 30.05100 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 67.87200 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 38.58350 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 67.87200 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 30.05100 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 38.58350 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL

REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THIS PROTEIN IS MONOMERIC.

REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000

REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 0 REMARK 465 SER A 1 REMARK 465 GLN A 2 REMARK 465 PRO A 3 REMARK 465 ASP A 4 REMARK 465 ALA A 5 REMARK 465 THR A 6 REMARK 465 ALA A 481 REMARK 465 GLY A 482 REMARK 465 ALA A 483

REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS(M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 480 CG CD NE CZ NH1 NH2

REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 1306 O HOH A 1307 2.10 REMARK 500 O HOH A 1268 O HOH A 1269 2.14 REMARK 500 NZ LYS A 330 O HOH A 1191 2.18 REMARK 500 O HOH A 979 O HOH A 1339 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 1223 O HOH A 1398 3555 2.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 51 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG A 152 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 MET A 362 CG - SD - CE ANGL. DEV. = 10.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 103 121.45 -171.49 REMARK 500 ARG A 160 40.94 -82.90 REMARK 500 HIS A 250 63.22 35.12 REMARK 500 PRO A 284 49.25 -85.72 REMARK 500 THR A 290 -161.35 -172.86 REMARK 500 THR A 406 -87.24 -139.80 REMARK 500 REMARK 500 REMARK: NULL

REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1375 DISTANCE = 6.64 ANGSTROMS REMARK 525 HOH A1381 DISTANCE = 5.85 ANGSTROMS

REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 801 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 220 ND1 REMARK 620 2 HIS A 250 NE2 94.0 REMARK 620 3 ACT A 901 O 93.7 121.6 REMARK 620 4 CYS A 96 SG 121.4 114.2 110.1 REMARK 620 5 ACT A 901 OXT 141.6 87.4 54.4 92.3 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 802 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 67 CE1 REMARK 620 2 HIS A 69 NE2 105.1 REMARK 620 3 ACT A 901 OXT 103.5 95.7 REMARK 620 4 CYS A 96 SG 107.7 141.6 95.6 REMARK 620 5 HIS A 67 NE2 28.0 127.7 112.5 80.3 REMARK 620 N 1 2 3 4

REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 801 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 802 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 901 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 902

DBREF 1M7J A 0 483 UNP Q9AGH8 Q9AGH8_ALCFA 1 484

SEQRES 1 A 484 MET SER GLN PRO ASP ALA THR PRO PHE ASP TYR ILE LEU SEQRES 2 A 484 SER GLY GLY THR VAL ILE ASP GLY THR ASN ALA PRO GLY SEQRES 3 A 484 ARG LEU ALA ASP VAL GLY VAL ARG GLY ASP ARG ILE ALA SEQRES 4 A 484 ALA VAL GLY ASP LEU SER ALA SER SER ALA ARG ARG ARG SEQRES 5 A 484 ILE ASP VAL ALA GLY LYS VAL VAL SER PRO GLY PHE ILE SEQRES 6 A 484 ASP SER HIS THR HIS ASP ASP ASN TYR LEU LEU LYS HIS SEQRES 7 A 484 ARG ASP MET THR PRO LYS ILE SER GLN GLY VAL THR THR SEQRES 8 A 484 VAL VAL THR GLY ASN CYS GLY ILE SER LEU ALA PRO LEU SEQRES 9 A 484 ALA HIS ALA ASN PRO PRO ALA PRO LEU ASP LEU LEU ASP SEQRES 10 A 484 GLU GLY GLY SER PHE ARG PHE ALA ARG PHE SER ASP TYR SEQRES 11 A 484 LEU GLU ALA LEU ARG ALA ALA PRO PRO ALA VAL ASN ALA SEQRES 12 A 484 ALA CYS MET VAL GLY HIS SER THR LEU ARG ALA ALA VAL SEQRES 13 A 484 MET PRO ASP LEU ARG ARG GLU ALA THR ALA ASP GLU ILE SEQRES 14 A 484 GLN ALA MET GLN ALA LEU ALA ASP ASP ALA LEU ALA SER SEQRES 15 A 484 GLY ALA ILE GLY ILE SER THR GLY ALA PHE TYR PRO PRO SEQRES 16 A 484 ALA ALA HIS ALA SER THR GLU GLU ILE ILE GLU VAL CYS SEQRES 17 A 484 ARG PRO LEU ILE THR HIS GLY GLY VAL TYR ALA THR HIS SEQRES 18 A 484 MET ARG ASP GLU GLY GLU HIS ILE VAL GLN ALA LEU GLU SEQRES 19 A 484 GLU THR PHE ARG ILE GLY ARG GLU LEU ASP VAL PRO VAL SEQRES 20 A 484 VAL ILE SER HIS HIS LYS VAL MET GLY LYS LEU ASN PHE SEQRES 21 A 484 GLY ARG SER LYS GLU THR LEU ALA LEU ILE GLU ALA ALA SEQRES 22 A 484 MET ALA SER GLN ASP VAL SER LEU ASP ALA TYR PRO TYR SEQRES 23 A 484 VAL ALA GLY SER THR MET LEU LYS GLN ASP ARG VAL LEU SEQRES 24 A 484 LEU ALA GLY ARG THR LEU ILE THR TRP CYS LYS PRO TYR SEQRES 25 A 484 PRO GLU LEU SER GLY ARG ASP LEU GLU GLU ILE ALA ALA SEQRES 26 A 484 GLU ARG GLY LYS SER LYS TYR ASP VAL VAL PRO GLU LEU SEQRES 27 A 484 GLN PRO ALA GLY ALA ILE TYR PHE MET MET ASP GLU PRO SEQRES 28 A 484 ASP VAL GLN ARG ILE LEU ALA PHE GLY PRO THR MET ILE SEQRES 29 A 484 GLY SER ASP GLY LEU PRO HIS ASP GLU ARG PRO HIS PRO SEQRES 30 A 484 ARG LEU TRP GLY THR PHE PRO ARG VAL LEU GLY HIS TYR SEQRES 31 A 484 SER ARG ASP LEU GLY LEU PHE PRO LEU GLU THR ALA VAL SEQRES 32 A 484 TRP LYS MET THR GLY LEU THR ALA ALA LYS PHE GLY LEU SEQRES 33 A 484 ALA GLU ARG GLY GLN VAL GLN PRO GLY TYR TYR ALA ASP SEQRES 34 A 484 LEU VAL VAL PHE ASP PRO ALA THR VAL ALA ASP SER ALA SEQRES 35 A 484 THR PHE GLU HIS PRO THR GLU ARG ALA ALA GLY ILE HIS SEQRES 36 A 484 SER VAL TYR VAL ASN GLY ALA ALA VAL TRP GLU ASP GLN SEQRES 37 A 484 SER PHE THR GLY GLN HIS ALA GLY ARG VAL LEU ASN ARG SEQRES 38 A 484 ALA GLY ALA

HET ZN A 801 1 HET ZN A 802 1 HET ACT A 901 4 HET ACT A 902 4

HETNAM ZN ZINC ION HETNAM ACT ACETATE ION

FORMUL 2 ZN 2(ZN 2+) FORMUL 4 ACT 2(C2 H3 O2 1-) FORMUL 6 HOH *503(H2 O)

HELIX 1 1 ASN A 72 HIS A 77 1 6 HELIX 2 2 MET A 80 SER A 85 1 6 HELIX 3 3 PRO A 111 ASP A 116 5 6 HELIX 4 4 ARG A 125 ALA A 136 1 12 HELIX 5 5 HIS A 148 MET A 156 1 9 HELIX 6 6 THR A 164 GLY A 182 1 19 HELIX 7 7 TYR A 192 ALA A 196 5 5 HELIX 8 8 SER A 199 ARG A 208 1 10 HELIX 9 9 ARG A 208 GLY A 214 1 7 HELIX 10 10 HIS A 227 ASP A 243 1 17 HELIX 11 11 GLY A 255 PHE A 259 5 5 HELIX 12 12 ARG A 261 GLN A 276 1 16 HELIX 13 13 TYR A 311 SER A 315 5 5 HELIX 14 14 ASP A 318 ARG A 326 1 9 HELIX 15 15 SER A 329 GLN A 338 1 10 HELIX 16 16 ASP A 348 PHE A 358 1 11 HELIX 17 17 PRO A 376 GLY A 387 1 12 HELIX 18 18 PRO A 397 LYS A 404 1 8 HELIX 19 19 THR A 406 GLY A 414 1 9

SHEET 1 A 4 ARG A 36 GLY A 41 0 SHEET 2 A 4 ASP A 29 ARG A 33 -1 N ASP A 29 O GLY A 41 SHEET 3 A 4 TYR A 10 SER A 13 -1 N LEU A 12 O VAL A 30 SHEET 4 A 4 ARG A 51 ASP A 53 1 O ILE A 52 N SER A 13 SHEET 1 B 7 ARG A 26 LEU A 27 0 SHEET 2 B 7 THR A 16 VAL A 17 -1 N VAL A 17 O ARG A 26 SHEET 3 B 7 VAL A 58 PRO A 61 1 O VAL A 59 N THR A 16 SHEET 4 B 7 LEU A 429 PHE A 432 -1 O PHE A 432 N VAL A 58 SHEET 5 B 7 ILE A 453 VAL A 458 -1 O TYR A 457 N LEU A 429 SHEET 6 B 7 ALA A 461 GLU A 465 -1 O VAL A 463 N VAL A 456 SHEET 7 B 7 SER A 468 PHE A 469 -1 O SER A 468 N GLU A 465 SHEET 1 C 8 PHE A 63 ASP A 65 0 SHEET 2 C 8 VAL A 88 THR A 93 1 O THR A 90 N ASP A 65 SHEET 3 C 8 ASN A 141 GLY A 147 1 O ALA A 143 N VAL A 91 SHEET 4 C 8 GLY A 185 GLY A 189 1 O GLY A 185 N VAL A 146 SHEET 5 C 8 VAL A 216 HIS A 220 1 O HIS A 220 N THR A 188 SHEET 6 C 8 VAL A 246 ILE A 248 1 O VAL A 247 N THR A 219 SHEET 7 C 8 VAL A 278 ALA A 282 1 O SER A 279 N ILE A 248 SHEET 8 C 8 THR A 361 ILE A 363 1 O MET A 362 N LEU A 280 SHEET 1 D 2 LEU A 103 ALA A 104 0 SHEET 2 D 2 ARG A 122 PHE A 123 -1 O PHE A 123 N LEU A 103 SHEET 1 E 3 GLY A 288 MET A 291 0 SHEET 2 E 3 ALA A 340 TYR A 344 -1 O TYR A 344 N GLY A 288 SHEET 3 E 3 THR A 303 CYS A 308 -1 N TRP A 307 O GLY A 341

LINK ZN ZN A 801 ND1 HIS A 220 1555 1555 2.08 LINK ZN ZN A 801 NE2 HIS A 250 1555 1555 2.04 LINK ZN ZN A 801 O ACT A 901 1555 1555 2.04 LINK ZN ZN A 802 CE1 HIS A 67 1555 1555 2.00 LINK ZN ZN A 802 NE2 HIS A 69 1555 1555 1.87 LINK ZN ZN A 801 SG CYS A 96 1555 1555 2.24 LINK ZN ZN A 801 OXT ACT A 901 1555 1555 2.59 LINK ZN ZN A 802 OXT ACT A 901 1555 1555 2.46 LINK ZN ZN A 802 SG CYS A 96 1555 1555 2.25 LINK ZN ZN A 802 NE2 HIS A 67 1555 1555 2.69

CISPEP 1 ALA A 101 PRO A 102 0 -0.16 CISPEP 2 ALA A 110 PRO A 111 0 1.30 CISPEP 3 GLN A 338 PRO A 339 0 -0.63

SITE 1 AC1 5 CYS A 96 HIS A 220 HIS A 250 ZN A 802 SITE 2 AC1 5 ACT A 901 SITE 1 AC2 6 HIS A 67 HIS A 69 CYS A 96 ASP A 366 SITE 2 AC2 6 ZN A 801 ACT A 901 SITE 1 AC3 12 HIS A 67 HIS A 69 CYS A 96 TYR A 192 SITE 2 AC3 12 HIS A 220 HIS A 250 SER A 289 THR A 290 SITE 3 AC3 12 ASP A 366 ZN A 801 ZN A 802 ACT A 902 SITE 1 AC4 7 LYS A 252 TYR A 283 GLY A 288 SER A 289 SITE 2 AC4 7 ASP A 366 ARG A 377 ACT A 901

CRYST1 60.102 77.167 135.744 90.00 90.00 90.00 P 21 21 21 4

ORIGX1 1.000000 0.000000 0.000000 0.00000

ORIGX2 0.000000 1.000000 0.000000 0.00000

ORIGX3 0.000000 0.000000 1.000000 0.00000

SCALE1 0.016638 0.000000 0.000000 0.00000

SCALE2 0.000000 0.012959 0.000000 0.00000

SCALE3 0.000000 0.000000 0.007367 0.00000