10 20 30 40 50 60 70 80 1LXW - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER HYDROLASE 06-JUN-02 1LXW
TITLE THEORETICAL MODEL OF THE CATALYTIC DOMAIN OF CAMP-SPECIFIC TITLE 2 3',5'-CYCLIC PHOSPHODIESTERASE 7B
COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAMP-SPECIFIC 3',5'-CYCLIC PHOSPHODIESTERASE 7B; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 1-330; COMPND 5 EC: 3.1.4.17
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN
KEYWDS HYDROLASE
EXPDTA THEORETICAL MODEL
AUTHOR S.RAMADEVI,S.SUNITATAJNE
REVDAT 2 20-NOV-02 1LXW 1 REMARK REVDAT 1 26-JUN-02 1LXW 0
JRNL AUTH S.RAMADEVI,S.SUNITATAJNE JRNL TITL THEORETICAL MODEL OF THE CATALYTIC DOMAIN OF JRNL TITL 2 CAMP-SPECIFIC 3',5'-CYCLIC PHOSPHODIESTERASE 7B JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NULL REMARK 3 AUTHORS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1LXW COMPLIES WITH FORMAT V. 2.3, 09-JULY-1998
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 10-JUN-2002. REMARK 100 THE RCSB ID CODE IS RCSB016392.
REMARK 220 REMARK 220 EXPERIMENTAL DETAILS REMARK 220 EXPERIMENT TYPE : THEORETICAL MODELLING REMARK 220 REMARK 220 REMARK: NULL
REMARK 225 REMARK 225 THEORETICAL MODEL REMARK 225 THE COORDINATES IN THIS ENTRY REPRESENT A MODEL STRUCTURE. REMARK 225 PROTEIN DATA BANK CONVENTIONS REQUIRE THAT CRYST1 AND REMARK 225 SCALE RECORDS BE INCLUDED, BUT THE VALUES ON THESE REMARK 225 RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),F6.3) REMARK 500 REMARK 500 EXPECTED VALUES: ENGH AND HUBER, 1991 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ARG A 321 CG ARG A 321 CD -0.186 REMARK 500 ARG A 321 CD ARG A 321 NE -0.304 REMARK 500 ARG A 321 CZ ARG A 321 NH1 -0.192 REMARK 500 ARG A 321 CZ ARG A 321 NH2 -0.167 REMARK 500 GLY A 322 N GLY A 322 CA 0.291 REMARK 500 GLY A 322 CA GLY A 322 C 0.254 REMARK 500 ARG A 321 C GLY A 322 N 0.248 REMARK 500 SER A 326 CA SER A 326 CB 0.197 REMARK 500 SER A 326 CB SER A 326 OG 0.191 REMARK 500 SER A 326 CA SER A 326 C -0.166 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES: ENGH AND HUBER, 1991 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ALA A 178 CB - CA - C ANGL. DEV. = 20.0 DEGREES REMARK 500 ARG A 183 CA - CB - CG ANGL. DEV. = 17.6 DEGREES REMARK 500 SER A 269 N - CA - CB ANGL. DEV. =-17.4 DEGREES REMARK 500 ARG A 321 CB - CG - CD ANGL. DEV. =-18.1 DEGREES REMARK 500 ARG A 321 CG - CD - NE ANGL. DEV. = 19.3 DEGREES REMARK 500 ARG A 321 N - CA - C ANGL. DEV. =-21.3 DEGREES REMARK 500 ARG A 321 CA - C - O ANGL. DEV. =-28.2 DEGREES REMARK 500 GLY A 322 C - N - CA ANGL. DEV. = 19.6 DEGREES REMARK 500 SER A 323 N - CA - C ANGL. DEV. =-17.1 DEGREES REMARK 500 GLY A 322 CA - C - N ANGL. DEV. = 28.6 DEGREES REMARK 500 GLY A 322 O - C - N ANGL. DEV. =-17.4 DEGREES REMARK 500 SER A 326 N - CA - CB ANGL. DEV. = 16.3 DEGREES REMARK 500 SER A 326 CA - CB - OG ANGL. DEV. = 21.3 DEGREES REMARK 500 SER A 326 C - N - CA ANGL. DEV. = 28.7 DEGREES REMARK 500 SER A 326 CA - C - N ANGL. DEV. =-18.1 DEGREES REMARK 500 SER A 326 O - C - N ANGL. DEV. = 17.4 DEGREES REMARK 500 HIS A 330 ND1 - CG - CD2 ANGL. DEV. =-17.1 DEGREES REMARK 500 HIS A 330 CB - CG - ND1 ANGL. DEV. = 20.3 DEGREES REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 297 -34.70 95.86 REMARK 500 SER A 320 152.49 68.41 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ARG A 155 LEU A 156 148.49 REMARK 500 LEU A 202 GLU A 203 -132.83 REMARK 500 ARG A 321 GLY A 322 135.53
DBREF 1LXW A 1 330 UNP Q9NP56 CN7B_HUMAN 104 433
SEQRES 1 A 330 GLN ALA ARG HIS MET LEU SER LYS VAL GLY MET TRP ASP SEQRES 2 A 330 PHE ASP ILE PHE LEU PHE ASP ARG LEU THR ASN GLY ASN SEQRES 3 A 330 SER LEU VAL THR LEU LEU CYS HIS LEU PHE ASN THR HIS SEQRES 4 A 330 GLY LEU ILE HIS HIS PHE LYS LEU ASP MET VAL THR LEU SEQRES 5 A 330 HIS ARG PHE LEU VAL MET VAL GLN GLU ASP TYR HIS SER SEQRES 6 A 330 GLN ASN PRO TYR HIS ASN ALA VAL HIS ALA ALA ASP VAL SEQRES 7 A 330 THR GLN ALA MET HIS CYS TYR LEU LYS GLU PRO LYS LEU SEQRES 8 A 330 ALA SER PHE LEU THR PRO LEU ASP ILE MET LEU GLY LEU SEQRES 9 A 330 LEU ALA ALA ALA ALA HIS ASP VAL ASP HIS PRO GLY VAL SEQRES 10 A 330 ASN GLN PRO PHE LEU ILE LYS THR ASN HIS HIS LEU ALA SEQRES 11 A 330 ASN LEU TYR GLN ASN MET SER VAL LEU GLU ASN HIS HIS SEQRES 12 A 330 TRP ARG SER THR ILE GLY MET LEU ARG GLU SER ARG LEU SEQRES 13 A 330 LEU ALA HIS LEU PRO LYS GLU MET THR GLN ASP ILE GLU SEQRES 14 A 330 GLN GLN LEU GLY SER LEU ILE LEU ALA THR ASP ILE ASN SEQRES 15 A 330 ARG GLN ASN GLU PHE LEU THR ARG LEU LYS ALA HIS LEU SEQRES 16 A 330 HIS ASN LYS ASP LEU ARG LEU GLU ASP ALA GLN ASP ARG SEQRES 17 A 330 HIS PHE MET LEU GLN ILE ALA LEU LYS CYS ALA ASP ILE SEQRES 18 A 330 CYS ASN PRO CYS ARG ILE TRP GLU MET SER LYS GLN TRP SEQRES 19 A 330 SER GLU ARG VAL CYS GLU GLU PHE TYR ARG GLN GLY GLU SEQRES 20 A 330 LEU GLU GLN LYS PHE GLU LEU GLU ILE SER PRO LEU CYS SEQRES 21 A 330 ASN GLN GLN LYS ASP SER ILE PRO SER ILE GLN ILE GLY SEQRES 22 A 330 PHE MET SER TYR ILE VAL GLU PRO LEU PHE ARG GLU TRP SEQRES 23 A 330 ALA HIS PHE THR GLY ASN SER THR LEU SER GLU ASN MET SEQRES 24 A 330 LEU GLY HIS LEU ALA HIS ASN LYS ALA GLN TRP LYS SER SEQRES 25 A 330 LEU LEU PRO ARG GLN HIS ARG SER ARG GLY SER SER GLY SEQRES 26 A 330 SER GLY PRO ASP HIS
HELIX 1 1 GLN A 1 LEU A 6 1 6 HELIX 2 2 SER A 7 VAL A 9 5 3 HELIX 3 3 ASP A 15 THR A 23 1 9 HELIX 4 4 ASN A 26 HIS A 39 1 14 HELIX 5 5 GLY A 40 PHE A 45 1 6 HELIX 6 6 ASP A 48 ASP A 62 1 15 HELIX 7 7 ASN A 71 LYS A 87 1 17 HELIX 8 8 GLU A 88 ALA A 92 5 5 HELIX 9 9 THR A 96 HIS A 110 1 15 HELIX 10 10 ASN A 118 THR A 125 1 8 HELIX 11 11 HIS A 127 TYR A 133 1 7 HELIX 12 12 SER A 137 MET A 150 1 14 HELIX 13 13 LEU A 151 SER A 154 5 4 HELIX 14 14 PRO A 161 ALA A 178 1 18 HELIX 15 15 THR A 179 ASN A 182 5 4 HELIX 16 16 ARG A 183 ASN A 197 1 15 HELIX 17 17 ASP A 204 ILE A 221 1 18 HELIX 18 18 CYS A 222 ARG A 226 5 5 HELIX 19 19 ILE A 227 PHE A 252 1 26 HELIX 20 20 SER A 266 ILE A 278 1 13 HELIX 21 21 ILE A 278 GLY A 291 1 14 HELIX 22 22 GLU A 297 TRP A 310 1 14 HELIX 23 23 GLY A 325 HIS A 330 1 6
CISPEP 1 GLY A 291 ASN A 292 0 -4.47 CISPEP 2 SER A 296 GLU A 297 0 -27.20 CISPEP 3 SER A 323 SER A 324 0 21.05
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000