10 20 30 40 50 60 70 80 1LX8 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER VIRAL PROTEIN 04-JUN-02 1LX8
TITLE REGULATION OF DIRECTIONALITY IN BACTERIOPHAGE LAMBDA SITE- TITLE 2 SPECIFIC RECOMBINATION: STRUCTURE OF THE XIS PROTEIN
COMPND MOL_ID: 1; COMPND 2 MOLECULE: EXCISIONASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: DNA BINDING DOMAIN; COMPND 5 SYNONYM: XIS; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROBACTERIA PHAGE LAMBDA; SOURCE 3 ORGANISM_TAXID: 10710; SOURCE 4 GENE: XIS; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: RJ3386 (BL21-DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PBAD33
KEYWDS DNA ARCHITECTURAL PROTEIN, 'WINGED'-HELIX PROTEIN, PHAGE KEYWDS 2 EXCISION, SITE-SPECIFIC DNA RECOMBINATION, VIRAL PROTEIN
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR M.D.SAM,C.PAPAGIANNIS,K.M.CONNOLLY,L.CORSELLI,J.IWAHARA, AUTHOR 2 J.LEE,M.PHILLIPS,J.M.WOJCIAK,R.C.JOHNSON,R.T.CLUBB
REVDAT 2 24-FEB-09 1LX8 1 VERSN REVDAT 1 10-JUN-03 1LX8 0
JRNL AUTH M.D.SAM,C.PAPAGIANNIS,K.M.CONNOLLY,L.CORSELLI, JRNL AUTH 2 J.IWAHARA,J.LEE,M.PHILLIPS,J.M.WOJCIAK,R.C.JOHNSON, JRNL AUTH 3 R.T.CLUBB JRNL TITL REGULATION OF DIRECTIONALITY IN BACTERIOPHAGE JRNL TITL 2 LAMBDA SITE-SPECIFIC RECOMBINATION: STRUCTURE OF JRNL TITL 3 THE XIS PROTEIN JRNL REF J.MOL.BIOL. V. 324 791 2002 JRNL REFN ISSN 0022-2836 JRNL PMID 12460578 JRNL DOI 10.1016/S0022-2836(02)01150-6
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.1 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1LX8 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-JUN-02. REMARK 100 THE RCSB ID CODE IS RCSB016372.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 5.0 REMARK 210 IONIC STRENGTH : 100MM NACL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1MM XIS, 15N/13C LABELED REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY, HNCA- REMARK 210 J, 4D_13C/15N-SEPARATED_NOESY, REMARK 210 HNHA REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ, 500 MHZ REMARK 210 SPECTROMETER MODEL : DRX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : X-PLOR 3.1, XWINNMR 2.6, REMARK 210 NMRPIPE SGI6X, NMRVIEW 4.1.3 REMARK 210 METHOD USED : HYBRID DISTANCE GEOMETRY AND REMARK 210 SIMULATED ANNEALING REMARK 210 CALCULATIONS. REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 TYR A 2 -154.50 -85.26 REMARK 500 1 PRO A 33 157.58 -41.82 REMARK 500 1 ASP A 37 66.25 -65.60 REMARK 500 1 ARG A 39 -25.07 -145.06 REMARK 500 1 ASP A 51 -92.32 -102.20 REMARK 500 1 LEU A 52 -76.46 -132.95 REMARK 500 1 ASN A 53 62.34 -168.94 REMARK 500 1 ARG A 54 71.69 -160.07 REMARK 500 2 ALA A 10 0.18 -60.49 REMARK 500 2 PRO A 15 -157.36 -83.88 REMARK 500 2 ARG A 16 -135.61 -148.05 REMARK 500 2 ASP A 37 65.62 -65.61 REMARK 500 2 HIS A 44 152.97 -40.48 REMARK 500 2 SER A 46 25.32 -151.46 REMARK 500 2 ASP A 51 -100.41 -104.64 REMARK 500 2 ARG A 54 77.56 53.85 REMARK 500 3 ARG A 14 68.49 -151.74 REMARK 500 3 ASP A 37 66.15 -65.43 REMARK 500 3 ARG A 39 -26.93 -145.96 REMARK 500 3 GLU A 45 0.41 -62.37 REMARK 500 3 ASP A 51 -120.36 -153.21 REMARK 500 3 LEU A 52 28.33 179.53 REMARK 500 4 TYR A 2 137.44 -171.93 REMARK 500 4 ARG A 14 77.47 -151.67 REMARK 500 4 ARG A 16 -145.76 -150.50 REMARK 500 4 SER A 28 41.18 74.06 REMARK 500 4 PHE A 31 129.36 -170.59 REMARK 500 4 ASP A 37 66.39 -65.84 REMARK 500 4 ARG A 39 -29.10 -145.21 REMARK 500 4 HIS A 44 167.75 -43.57 REMARK 500 4 GLU A 45 30.27 -81.44 REMARK 500 4 SER A 46 13.78 -144.79 REMARK 500 4 ASP A 51 -101.39 -151.67 REMARK 500 4 LEU A 52 -85.50 -132.46 REMARK 500 4 ASN A 53 -46.60 -175.96 REMARK 500 4 ARG A 54 152.74 -45.80 REMARK 500 5 GLN A 6 -73.11 -44.83 REMARK 500 5 ARG A 16 -133.04 -150.71 REMARK 500 5 ASP A 37 65.84 -65.23 REMARK 500 5 ARG A 39 -29.45 -142.34 REMARK 500 5 ASP A 51 -79.57 -121.61 REMARK 500 5 LEU A 52 -85.44 -130.88 REMARK 500 6 ALA A 10 0.92 -59.70 REMARK 500 6 PRO A 33 157.39 -44.77 REMARK 500 6 ASP A 37 67.34 -64.54 REMARK 500 6 ARG A 39 -28.18 -146.06 REMARK 500 6 HIS A 44 -99.67 -51.72 REMARK 500 6 GLU A 45 -37.17 -156.95 REMARK 500 6 SER A 46 1.19 -68.23 REMARK 500 6 ASP A 51 -109.87 -159.54 REMARK 500 6 LEU A 52 -31.99 -171.75 REMARK 500 6 ASN A 53 -76.40 -85.76 REMARK 500 7 TYR A 2 139.23 -176.74 REMARK 500 7 ALA A 10 -8.82 -59.94 REMARK 500 7 PRO A 15 -159.12 -82.13 REMARK 500 7 ARG A 16 -157.33 -151.11 REMARK 500 7 ASP A 37 67.41 -64.97 REMARK 500 7 ARG A 39 -24.13 -143.05 REMARK 500 7 ASP A 51 -105.79 -99.21 REMARK 500 7 LEU A 52 -70.57 -76.40 REMARK 500 7 ASN A 53 -83.31 -153.14 REMARK 500 8 TYR A 2 118.81 -174.30 REMARK 500 8 LEU A 5 -70.93 -43.16 REMARK 500 8 PRO A 33 155.21 -40.70 REMARK 500 8 ASP A 37 66.35 -64.67 REMARK 500 8 ARG A 39 -25.46 -146.37 REMARK 500 8 ASP A 51 -31.70 -175.23 REMARK 500 8 LEU A 52 14.63 -68.71 REMARK 500 8 ASN A 53 -5.51 -56.47 REMARK 500 8 ARG A 54 73.23 54.19 REMARK 500 9 TYR A 2 -156.82 -64.83 REMARK 500 9 ARG A 14 82.56 -151.11 REMARK 500 9 PRO A 34 168.18 -39.77 REMARK 500 9 ASP A 37 67.30 -65.21 REMARK 500 9 ARG A 39 27.20 -147.18 REMARK 500 9 GLU A 45 -9.46 -51.08 REMARK 500 9 ASP A 51 -107.24 -81.49 REMARK 500 9 LEU A 52 61.07 -150.34 REMARK 500 9 ARG A 54 130.75 61.45 REMARK 500 10 TYR A 2 -153.50 -155.28 REMARK 500 10 ALA A 10 -6.68 -57.68 REMARK 500 10 ARG A 16 -155.21 -151.00 REMARK 500 10 ASP A 37 65.85 -66.49 REMARK 500 10 ARG A 39 -24.85 -146.53 REMARK 500 10 ASP A 51 -37.66 -165.82 REMARK 500 10 ASN A 53 -33.81 -162.84 REMARK 500 11 TYR A 2 -167.12 -68.81 REMARK 500 11 GLN A 6 -70.24 -46.44 REMARK 500 11 ARG A 14 72.05 -151.07 REMARK 500 11 GLU A 27 26.32 -78.33 REMARK 500 11 PRO A 33 157.44 -47.33 REMARK 500 11 ASP A 37 65.88 -65.37 REMARK 500 11 ARG A 39 -32.23 -136.39 REMARK 500 11 HIS A 44 172.82 -49.28 REMARK 500 11 ASP A 51 -107.88 -73.08 REMARK 500 11 LEU A 52 20.45 43.80 REMARK 500 12 TYR A 2 -150.98 -88.34 REMARK 500 12 ALA A 10 -5.91 -57.40 REMARK 500 12 PRO A 15 -166.27 -79.91 REMARK 500 12 PRO A 33 154.09 -42.64 REMARK 500 12 ASP A 37 66.11 -65.75 REMARK 500 12 ARG A 39 -23.71 -146.46 REMARK 500 12 GLU A 45 12.14 -68.81 REMARK 500 12 ASP A 51 -110.91 -141.38 REMARK 500 12 LEU A 52 -77.78 -86.71 REMARK 500 12 ASN A 53 10.14 53.16 REMARK 500 12 ARG A 54 62.29 -165.55 REMARK 500 13 TYR A 2 134.27 -170.41 REMARK 500 13 ASP A 37 66.26 -64.52 REMARK 500 13 ARG A 39 -26.38 -146.77 REMARK 500 13 HIS A 44 -139.99 -59.50 REMARK 500 13 SER A 46 74.64 -166.79 REMARK 500 13 ALA A 47 -177.77 -49.85 REMARK 500 13 ASP A 51 -35.47 -167.14 REMARK 500 13 ASN A 53 35.74 -158.58 REMARK 500 13 ARG A 54 149.06 59.80 REMARK 500 14 ALA A 10 -2.50 -59.23 REMARK 500 14 ARG A 14 79.40 -151.42 REMARK 500 14 SER A 17 159.28 -46.01 REMARK 500 14 PRO A 33 154.77 -41.55 REMARK 500 14 ASP A 37 65.70 -66.17 REMARK 500 14 HIS A 44 -101.78 -51.12 REMARK 500 14 GLU A 45 -44.50 -152.61 REMARK 500 14 SER A 46 12.68 -69.20 REMARK 500 14 ASP A 51 -87.42 -137.77 REMARK 500 15 TYR A 2 162.00 -49.41 REMARK 500 15 ARG A 14 64.79 -150.49 REMARK 500 15 PRO A 34 171.88 -42.02 REMARK 500 15 ASP A 37 72.54 -62.69 REMARK 500 15 ARG A 39 20.35 -148.35 REMARK 500 15 SER A 46 0.80 -69.51 REMARK 500 15 ASP A 51 -37.65 -161.92 REMARK 500 16 TYR A 2 -152.47 -82.13 REMARK 500 16 GLN A 6 -71.54 -43.65 REMARK 500 16 ALA A 10 -8.40 -59.83 REMARK 500 16 ARG A 14 65.68 -150.07 REMARK 500 16 ARG A 16 -129.23 -152.83 REMARK 500 16 GLU A 27 21.03 -79.09 REMARK 500 16 ASP A 37 66.33 -64.82 REMARK 500 16 ARG A 39 -27.06 -146.24 REMARK 500 16 ASP A 51 -111.44 -105.93 REMARK 500 16 LEU A 52 41.96 -146.82 REMARK 500 17 ASP A 37 65.33 -65.62 REMARK 500 17 ARG A 39 -32.68 -134.18 REMARK 500 17 GLU A 45 30.01 -73.73 REMARK 500 17 ASP A 51 -86.16 -125.86 REMARK 500 17 LEU A 52 35.11 -141.54 REMARK 500 17 ASN A 53 7.95 -66.86 REMARK 500 18 TYR A 2 -154.34 -92.08 REMARK 500 18 ALA A 10 -2.04 -59.20 REMARK 500 18 ARG A 16 -159.57 -155.57 REMARK 500 18 ASP A 37 64.37 -68.67 REMARK 500 18 ARG A 39 -28.87 -145.59 REMARK 500 18 GLU A 45 -9.79 -51.31 REMARK 500 18 ASP A 51 -64.55 -155.67 REMARK 500 18 ASN A 53 9.84 -69.00 REMARK 500 18 ARG A 54 74.10 54.46 REMARK 500 19 ARG A 14 63.45 -150.63 REMARK 500 19 ARG A 16 -157.54 -143.09 REMARK 500 19 ASP A 37 66.23 -64.90 REMARK 500 19 ARG A 39 -29.73 -146.06 REMARK 500 19 ASP A 51 -95.53 -154.58 REMARK 500 19 ASN A 53 24.00 -78.54 REMARK 500 20 TYR A 2 130.86 -175.79 REMARK 500 20 GLN A 6 -71.40 -44.97 REMARK 500 20 ARG A 14 74.61 -153.42 REMARK 500 20 ARG A 16 -130.61 -151.98 REMARK 500 20 PHE A 31 138.31 -170.64 REMARK 500 20 ASP A 37 66.05 -65.63 REMARK 500 20 ARG A 39 -24.40 -146.20 REMARK 500 20 ASP A 51 -107.95 -165.15 REMARK 500 20 ASN A 53 -44.67 -150.80 REMARK 500 20 ARG A 54 -49.39 179.61 REMARK 500 REMARK 500 REMARK: NULL
DBREF 1LX8 A 1 55 UNP P03699 VXIS_LAMBD 1 55
SEQADV 1LX8 SER A 28 UNP P03699 CYS 28 ENGINEERED
SEQRES 1 A 55 MET TYR LEU THR LEU GLN GLU TRP ASN ALA ARG GLN ARG SEQRES 2 A 55 ARG PRO ARG SER LEU GLU THR VAL ARG ARG TRP VAL ARG SEQRES 3 A 55 GLU SER ARG ILE PHE PRO PRO PRO VAL LYS ASP GLY ARG SEQRES 4 A 55 GLU TYR LEU PHE HIS GLU SER ALA VAL LYS VAL ASP LEU SEQRES 5 A 55 ASN ARG PRO
HELIX 1 1 THR A 4 ARG A 11 1 8 HELIX 2 2 SER A 17 GLU A 27 1 11
SHEET 1 A 2 ILE A 30 PHE A 31 0 SHEET 2 A 2 VAL A 48 LYS A 49 -1 O VAL A 48 N PHE A 31 SHEET 1 B 2 VAL A 35 ASP A 37 0 SHEET 2 B 2 GLU A 40 LEU A 42 -1 O LEU A 42 N VAL A 35
CISPEP 1 PHE A 31 PRO A 32 1 -0.71 CISPEP 2 PHE A 31 PRO A 32 2 -0.51 CISPEP 3 PHE A 31 PRO A 32 3 -0.70 CISPEP 4 PHE A 31 PRO A 32 4 -1.16 CISPEP 5 PHE A 31 PRO A 32 5 -1.28 CISPEP 6 PHE A 31 PRO A 32 6 -1.01 CISPEP 7 PHE A 31 PRO A 32 7 -0.74 CISPEP 8 PHE A 31 PRO A 32 8 -0.35 CISPEP 9 PHE A 31 PRO A 32 9 -0.14 CISPEP 10 PHE A 31 PRO A 32 10 -0.74 CISPEP 11 PHE A 31 PRO A 32 11 -0.99 CISPEP 12 PHE A 31 PRO A 32 12 -0.67 CISPEP 13 PHE A 31 PRO A 32 13 -0.68 CISPEP 14 PHE A 31 PRO A 32 14 -0.73 CISPEP 15 PHE A 31 PRO A 32 15 -1.07 CISPEP 16 PHE A 31 PRO A 32 16 -1.15 CISPEP 17 PHE A 31 PRO A 32 17 -1.12 CISPEP 18 PHE A 31 PRO A 32 18 -0.53 CISPEP 19 PHE A 31 PRO A 32 19 -0.79 CISPEP 20 PHE A 31 PRO A 32 20 -0.92
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000