10 20 30 40 50 60 70 80 1LW1 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER OXIDOREDUCTASE 30-MAY-02 1LW1
TITLE CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS ALKYLPEROXIDASE AHPD TITLE 2 H137F MUTANT
COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALKYLHYDROPEROXIDASE D; COMPND 3 CHAIN: A, B, C; COMPND 4 SYNONYM: AHPD PROTEIN; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 83332; SOURCE 4 STRAIN: H37RV; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PACYC; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PACAHPD
KEYWDS ALKYLHYDROPEROXIDASE, TUBERCULOSIS, OXIDOREDUCTASE
EXPDTA X-RAY DIFFRACTION
AUTHOR C.M.NUNN,S.DJORDJEVIC,P.R.ORTIZ DE MONTELLANO
REVDAT 5 13-JUL-11 1LW1 1 VERSN REVDAT 4 24-FEB-09 1LW1 1 VERSN REVDAT 3 16-SEP-03 1LW1 1 JRNL REVDAT 2 16-OCT-02 1LW1 1 TITLE REVDAT 1 17-JUL-02 1LW1 0
JRNL AUTH A.KOSHKIN,C.M.NUNN,S.DJORDJEVIC,P.R.ORTIZ DE MONTELLANO JRNL TITL THE MECHANISM OF MYCOBACTERIUM TUBERCULOSIS JRNL TITL 2 ALKYLHYDROPEROXIDASE AHPD AS DEFINED BY MUTAGENESIS, JRNL TITL 3 CRYSTALLOGRAPHY, AND KINETICS JRNL REF J.BIOL.CHEM. V. 278 29502 2003 JRNL REFN ISSN 0021-9258 JRNL PMID 12761216 JRNL DOI 10.1074/JBC.M303747200
REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH A.T.BRUNGER,P.D.ADAMS,G.M.CLORE,W.L.DELANO,P.GROS, REMARK 1 AUTH 2 R.W.GROSSE-KUNSTLEVE,J.-S.JIANG,J.KUSZEWSKI,M.NILGES, REMARK 1 AUTH 3 N.S.PANNU,R.J.READ,L.M.RICE,T.SIMONSON,G.L.WARREN REMARK 1 TITL CRYSTALLOGRAPHY & NMR SYSTEM: A NEW SOFTWARE SUITE FOR REMARK 1 TITL 2 MACROMOLECULAR STRUCTURE DETERMINATION REMARK 1 REF ACTA CRYSTALLOGR.,SECT.D V. 54 905 1998 REMARK 1 REFN ISSN 0907-4449 REMARK 1 DOI 10.1107/S0907444998003254
REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 92.5 REMARK 3 NUMBER OF REFLECTIONS : 16580 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.184 REMARK 3 FREE R VALUE : 0.286 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 1816 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.38 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 70.30 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2747 REMARK 3 BIN FREE R VALUE : 0.3572 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 9.00 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 142 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.006 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3887 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 364 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 32.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 44.14 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -17.05000 REMARK 3 B22 (A**2) : 18.60000 REMARK 3 B33 (A**2) : -1.55000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 1.52000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.27 REMARK 3 ESD FROM SIGMAA (A) : 0.35 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.40 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.44 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 1.30 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 18.83 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.84 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 2.971 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 4.588 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 4.489 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 6.539 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : CNS BULK SOLVENT MODEL USED REMARK 3 KSOL : 0.35 REMARK 3 BSOL : 75.39 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1LW1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 03-JUN-02. REMARK 100 THE RCSB ID CODE IS RCSB016331.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-APR-02 REMARK 200 TEMPERATURE (KELVIN) : 110 REMARK 200 PH : 6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SRS REMARK 200 BEAMLINE : PX9.6 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.87 REMARK 200 MONOCHROMATOR : SINGLE CRYSTAL SI(111) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18396 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.5 REMARK 200 DATA REDUNDANCY : 3.420 REMARK 200 R MERGE (I) : 0.11000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 9.1880 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 70.3 REMARK 200 DATA REDUNDANCY IN SHELL : 3.00 REMARK 200 R MERGE FOR SHELL (I) : 0.24000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.940 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS 1.1 REMARK 200 STARTING MODEL: 1GU9 REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 37.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.96 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM SODIUM CITRATE BUFFER, PH 5.6, REMARK 280 CONTAINING 200MM AMMONIUM ACETATE AND 26% PEG 4000. MIXED IN REMARK 280 EQUAL VOLUME WITH AHPD (4.5 MG/ML) IN 25MM MOPS BUFFER, PH 7.2, REMARK 280 CONTAINING 50MM KCL, 10% GLYCEROL, 0.1MM EDTA, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 290.0K
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 48.30150 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 31.09200 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 48.30150 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 31.09200 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: CHAINS A, B AND C FORM A PROTEIN TRIMER
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8860 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18680 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -55.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 20580 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 34510 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -119.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000
REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 275 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 262 LIES ON A SPECIAL POSITION. REMARK 375 HOH C 272 LIES ON A SPECIAL POSITION.
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 PRO B 176 REMARK 465 SER B 177 REMARK 465 MET C 1 REMARK 465 SER C 2 REMARK 465 SER C 175 REMARK 465 PRO C 176 REMARK 465 SER C 177
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE1 GLU B 92 OE1 GLU B 92 2555 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO B 110 C - N - CA ANGL. DEV. = 9.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 14 30.74 -149.73 REMARK 500 ASP A 31 177.00 -55.43 REMARK 500 GLU A 92 42.88 37.71 REMARK 500 ARG A 99 92.88 53.16 REMARK 500 MET A 104 -66.48 -138.07 REMARK 500 ASN A 105 -60.55 46.70 REMARK 500 VAL A 146 105.29 53.16 REMARK 500 ASP B 61 40.12 -86.92 REMARK 500 HIS B 62 -14.90 -149.22 REMARK 500 MET B 80 -61.22 -90.89 REMARK 500 LEU B 91 46.77 -91.29 REMARK 500 GLU B 92 26.04 46.90 REMARK 500 MET B 104 39.84 -161.27 REMARK 500 ALA B 108 18.53 -69.79 REMARK 500 ASN B 109 142.72 59.08 REMARK 500 PRO B 110 -159.29 -81.76 REMARK 500 LYS B 114 94.75 -60.75 REMARK 500 ALA B 115 -58.33 -176.10 REMARK 500 ARG C 47 -6.13 73.86 REMARK 500 GLU C 92 3.44 57.99 REMARK 500 ARG C 94 -28.21 -39.75 REMARK 500 MET C 104 39.46 -154.39 REMARK 500 GLU C 172 44.66 -70.44 REMARK 500 ALA C 173 83.82 -153.70 REMARK 500 REMARK 500 REMARK: NULL
REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 243 DISTANCE = 5.13 ANGSTROMS REMARK 525 HOH A 253 DISTANCE = 5.73 ANGSTROMS REMARK 525 HOH A 270 DISTANCE = 5.82 ANGSTROMS REMARK 525 HOH A 276 DISTANCE = 7.28 ANGSTROMS REMARK 525 HOH A 278 DISTANCE = 5.63 ANGSTROMS REMARK 525 HOH A 287 DISTANCE = 5.89 ANGSTROMS REMARK 525 HOH A 289 DISTANCE = 5.58 ANGSTROMS REMARK 525 HOH A 292 DISTANCE = 5.58 ANGSTROMS REMARK 525 HOH B 209 DISTANCE = 9.56 ANGSTROMS REMARK 525 HOH B 238 DISTANCE = 9.59 ANGSTROMS REMARK 525 HOH B 247 DISTANCE = 8.94 ANGSTROMS REMARK 525 HOH B 248 DISTANCE = 5.58 ANGSTROMS REMARK 525 HOH B 264 DISTANCE = 7.28 ANGSTROMS REMARK 525 HOH B 268 DISTANCE = 5.51 ANGSTROMS REMARK 525 HOH B 279 DISTANCE = 6.30 ANGSTROMS REMARK 525 HOH B 283 DISTANCE = 6.74 ANGSTROMS REMARK 525 HOH B 284 DISTANCE = 6.36 ANGSTROMS REMARK 525 HOH B 287 DISTANCE = 5.22 ANGSTROMS REMARK 525 HOH B 288 DISTANCE = 8.95 ANGSTROMS REMARK 525 HOH B 291 DISTANCE = 9.00 ANGSTROMS REMARK 525 HOH B 299 DISTANCE = 6.39 ANGSTROMS REMARK 525 HOH C 229 DISTANCE = 5.69 ANGSTROMS REMARK 525 HOH C 230 DISTANCE = 5.22 ANGSTROMS REMARK 525 HOH C 240 DISTANCE = 5.34 ANGSTROMS REMARK 525 HOH C 255 DISTANCE = 9.08 ANGSTROMS REMARK 525 HOH C 258 DISTANCE = 5.88 ANGSTROMS REMARK 525 HOH C 264 DISTANCE = 6.47 ANGSTROMS REMARK 525 HOH C 272 DISTANCE = 8.42 ANGSTROMS REMARK 525 HOH C 276 DISTANCE = 9.69 ANGSTROMS REMARK 525 HOH C 277 DISTANCE = 8.31 ANGSTROMS REMARK 525 HOH C 283 DISTANCE = 5.51 ANGSTROMS REMARK 525 HOH C 285 DISTANCE = 6.38 ANGSTROMS REMARK 525 HOH C 286 DISTANCE = 7.87 ANGSTROMS REMARK 525 HOH C 288 DISTANCE = 7.16 ANGSTROMS REMARK 525 HOH C 290 DISTANCE = 6.58 ANGSTROMS REMARK 525 HOH C 295 DISTANCE = 7.12 ANGSTROMS REMARK 525 HOH C 299 DISTANCE = 5.50 ANGSTROMS
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1GU9 RELATED DB: PDB REMARK 900 1GU9 CONTAINS CRYSTAL STRUCTURE OF THE SAME PROTEIN REMARK 900 COMPLEXED WITH MSE
DBREF 1LW1 A 1 177 UNP P0A5N4 AHPD_MYCTU 1 177 DBREF 1LW1 B 1 177 UNP P0A5N4 AHPD_MYCTU 1 177 DBREF 1LW1 C 1 177 UNP P0A5N4 AHPD_MYCTU 1 177
SEQADV 1LW1 PHE A 137 UNP P0A5N4 HIS 137 ENGINEERED SEQADV 1LW1 PHE B 137 UNP P0A5N4 HIS 137 ENGINEERED SEQADV 1LW1 PHE C 137 UNP P0A5N4 HIS 137 ENGINEERED
SEQRES 1 A 177 MET SER ILE GLU LYS LEU LYS ALA ALA LEU PRO GLU TYR SEQRES 2 A 177 ALA LYS ASP ILE LYS LEU ASN LEU SER SER ILE THR ARG SEQRES 3 A 177 SER SER VAL LEU ASP GLN GLU GLN LEU TRP GLY THR LEU SEQRES 4 A 177 LEU ALA SER ALA ALA ALA THR ARG ASN PRO GLN VAL LEU SEQRES 5 A 177 ALA ASP ILE GLY ALA GLU ALA THR ASP HIS LEU SER ALA SEQRES 6 A 177 ALA ALA ARG HIS ALA ALA LEU GLY ALA ALA ALA ILE MET SEQRES 7 A 177 GLY MET ASN ASN VAL PHE TYR ARG GLY ARG GLY PHE LEU SEQRES 8 A 177 GLU GLY ARG TYR ASP ASP LEU ARG PRO GLY LEU ARG MET SEQRES 9 A 177 ASN ILE ILE ALA ASN PRO GLY ILE PRO LYS ALA ASN PHE SEQRES 10 A 177 GLU LEU TRP SER PHE ALA VAL SER ALA ILE ASN GLY CYS SEQRES 11 A 177 SER HIS CYS LEU VAL ALA PHE GLU HIS THR LEU ARG THR SEQRES 12 A 177 VAL GLY VAL ASP ARG GLU ALA ILE PHE GLU ALA LEU LYS SEQRES 13 A 177 ALA ALA ALA ILE VAL SER GLY VAL ALA GLN ALA LEU ALA SEQRES 14 A 177 THR ILE GLU ALA LEU SER PRO SER SEQRES 1 B 177 MET SER ILE GLU LYS LEU LYS ALA ALA LEU PRO GLU TYR SEQRES 2 B 177 ALA LYS ASP ILE LYS LEU ASN LEU SER SER ILE THR ARG SEQRES 3 B 177 SER SER VAL LEU ASP GLN GLU GLN LEU TRP GLY THR LEU SEQRES 4 B 177 LEU ALA SER ALA ALA ALA THR ARG ASN PRO GLN VAL LEU SEQRES 5 B 177 ALA ASP ILE GLY ALA GLU ALA THR ASP HIS LEU SER ALA SEQRES 6 B 177 ALA ALA ARG HIS ALA ALA LEU GLY ALA ALA ALA ILE MET SEQRES 7 B 177 GLY MET ASN ASN VAL PHE TYR ARG GLY ARG GLY PHE LEU SEQRES 8 B 177 GLU GLY ARG TYR ASP ASP LEU ARG PRO GLY LEU ARG MET SEQRES 9 B 177 ASN ILE ILE ALA ASN PRO GLY ILE PRO LYS ALA ASN PHE SEQRES 10 B 177 GLU LEU TRP SER PHE ALA VAL SER ALA ILE ASN GLY CYS SEQRES 11 B 177 SER HIS CYS LEU VAL ALA PHE GLU HIS THR LEU ARG THR SEQRES 12 B 177 VAL GLY VAL ASP ARG GLU ALA ILE PHE GLU ALA LEU LYS SEQRES 13 B 177 ALA ALA ALA ILE VAL SER GLY VAL ALA GLN ALA LEU ALA SEQRES 14 B 177 THR ILE GLU ALA LEU SER PRO SER SEQRES 1 C 177 MET SER ILE GLU LYS LEU LYS ALA ALA LEU PRO GLU TYR SEQRES 2 C 177 ALA LYS ASP ILE LYS LEU ASN LEU SER SER ILE THR ARG SEQRES 3 C 177 SER SER VAL LEU ASP GLN GLU GLN LEU TRP GLY THR LEU SEQRES 4 C 177 LEU ALA SER ALA ALA ALA THR ARG ASN PRO GLN VAL LEU SEQRES 5 C 177 ALA ASP ILE GLY ALA GLU ALA THR ASP HIS LEU SER ALA SEQRES 6 C 177 ALA ALA ARG HIS ALA ALA LEU GLY ALA ALA ALA ILE MET SEQRES 7 C 177 GLY MET ASN ASN VAL PHE TYR ARG GLY ARG GLY PHE LEU SEQRES 8 C 177 GLU GLY ARG TYR ASP ASP LEU ARG PRO GLY LEU ARG MET SEQRES 9 C 177 ASN ILE ILE ALA ASN PRO GLY ILE PRO LYS ALA ASN PHE SEQRES 10 C 177 GLU LEU TRP SER PHE ALA VAL SER ALA ILE ASN GLY CYS SEQRES 11 C 177 SER HIS CYS LEU VAL ALA PHE GLU HIS THR LEU ARG THR SEQRES 12 C 177 VAL GLY VAL ASP ARG GLU ALA ILE PHE GLU ALA LEU LYS SEQRES 13 C 177 ALA ALA ALA ILE VAL SER GLY VAL ALA GLN ALA LEU ALA SEQRES 14 C 177 THR ILE GLU ALA LEU SER PRO SER
FORMUL 4 HOH *364(H2 O)
HELIX 1 1 ILE A 3 LEU A 10 1 8 HELIX 2 2 PRO A 11 TYR A 13 5 3 HELIX 3 3 ALA A 14 ARG A 26 1 13 HELIX 4 4 ASP A 31 THR A 46 1 16 HELIX 5 5 ASN A 48 ALA A 59 1 12 HELIX 6 6 THR A 60 HIS A 62 5 3 HELIX 7 7 SER A 64 LEU A 91 1 28 HELIX 8 8 PRO A 113 GLY A 129 1 17 HELIX 9 9 CYS A 130 VAL A 144 1 15 HELIX 10 10 ASP A 147 SER A 175 1 29 HELIX 11 11 ILE B 3 LEU B 10 1 8 HELIX 12 12 PRO B 11 TYR B 13 5 3 HELIX 13 13 ALA B 14 THR B 25 1 12 HELIX 14 14 ASP B 31 ARG B 47 1 17 HELIX 15 15 ASN B 48 THR B 60 1 13 HELIX 16 16 ASP B 61 LEU B 63 5 3 HELIX 17 17 SER B 64 LEU B 91 1 28 HELIX 18 18 MET B 104 ASN B 109 5 6 HELIX 19 19 ALA B 115 GLY B 129 1 15 HELIX 20 20 CYS B 130 GLY B 145 1 16 HELIX 21 21 ASP B 147 SER B 175 1 29 HELIX 22 22 ILE C 3 LEU C 10 1 8 HELIX 23 23 PRO C 11 TYR C 13 5 3 HELIX 24 24 ALA C 14 ARG C 26 1 13 HELIX 25 25 ASP C 31 ARG C 47 1 17 HELIX 26 26 ASN C 48 THR C 60 1 13 HELIX 27 27 SER C 64 LEU C 91 1 28 HELIX 28 28 MET C 104 ALA C 108 5 5 HELIX 29 29 PRO C 113 GLY C 129 1 17 HELIX 30 30 CYS C 130 VAL C 144 1 15 HELIX 31 31 ASP C 147 THR C 170 1 24
CRYST1 96.603 62.184 89.481 90.00 121.81 90.00 C 1 2 1 12
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.010352 0.000000 0.006421 0.00000
SCALE2 0.000000 0.016081 0.000000 0.00000
SCALE3 0.000000 0.000000 0.013151 0.00000