10 20 30 40 50 60 70 80 1LVT - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER STRUCTURAL PROTEIN 29-MAY-02 1LVT
TITLE THEORETICAL MODEL OF ACTIN, AORTIC SMOOTH MUSCLE
COMPND MOL_ID: 1; COMPND 2 MOLECULE: ACTIN, AORTIC SMOOTH MUSCLE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ALPHA-ACTIN
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GALLUS GALLUS; SOURCE 3 ORGANISM_COMMON: CHICKEN
KEYWDS MULTIGENE FAMILY, MUSCLE PROTEIN, METHYLATION, ACETYLATION
EXPDTA THEORETICAL MODEL
AUTHOR R.SAGAJKAR
REVDAT 1 26-JUN-02 1LVT 0
JRNL AUTH R.SAGAJKAR JRNL TITL THEORETICAL MODEL OF ACTIN, AORTIC SMOOTH MUSCLE JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NULL REMARK 3 AUTHORS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1LVT COMPLIES WITH FORMAT V. 2.3, 09-JULY-1998
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-JUN-2002. REMARK 100 THE RCSB ID CODE IS RCSB016324.
REMARK 220 REMARK 220 EXPERIMENTAL DETAILS REMARK 220 EXPERIMENT TYPE : THEORETICAL MODELLING REMARK 220 REMARK 220 REMARK: THIS STRUCTURE WAS DETERMINED USING HOMOLOGY MODELING REMARK 220 TECHNIQUE. THE REFERENCE PROTEINS WERE PDB ENTRIES 1EQY, REMARK 220 1IJJ, AND 1J6Z. THE MULTIPLE SEQUENCE ALIGNMENT WAS DONE REMARK 220 ACCORDING TO CLUSTALW ALIGNMENT.THE FORCE FIELD USED FOR REMARK 220 MINIMIZATION IS CHARMM. THE NUMBER OF MINIMIZATION STEPS REMARK 220 ARE 200 FOR STEEPEST DESCENT AND 200 FOR THE GONJUGATE REMARK 220 GRADIENT.
REMARK 225 REMARK 225 THEORETICAL MODEL REMARK 225 THE COORDINATES IN THIS ENTRY REPRESENT A MODEL STRUCTURE. REMARK 225 PROTEIN DATA BANK CONVENTIONS REQUIRE THAT CRYST1 AND REMARK 225 SCALE RECORDS BE INCLUDED, BUT THE VALUES ON THESE REMARK 225 RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES: ENGH AND HUBER, 1991 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASN A 80 CB - CG - OD1 ANGL. DEV. =-76.7 DEGREES REMARK 500 ASN A 80 CB - CG - ND2 ANGL. DEV. =-23.0 DEGREES REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 46 178.39 108.64
DBREF 1LVT A 1 377 UNP P08023 ACTA_CHICK 1 377
SEQRES 1 A 377 MET CYS GLU GLU GLU ASP SER THR ALA LEU VAL CYS ASP SEQRES 2 A 377 ASN GLY SER GLY LEU CYS LYS ALA GLY PHE ALA GLY ASP SEQRES 3 A 377 ASP ALA PRO ARG ALA VAL PHE PRO SER ILE VAL GLY ARG SEQRES 4 A 377 PRO ARG HIS GLN GLY VAL MET VAL GLY MET GLY GLN LYS SEQRES 5 A 377 ASP SER TYR VAL GLY ASP GLU ALA GLN SER LYS ARG GLY SEQRES 6 A 377 ILE LEU THR LEU LYS TYR PRO ILE GLU HIS GLY ILE ILE SEQRES 7 A 377 THR ASN TRP ASP ASP MET GLU LYS ILE TRP HIS HIS SER SEQRES 8 A 377 PHE TYR ASN GLU LEU ARG VAL ALA PRO GLU GLU HIS PRO SEQRES 9 A 377 THR LEU LEU THR GLU ALA PRO LEU ASN PRO LYS ALA ASN SEQRES 10 A 377 ARG GLU LYS MET THR GLN ILE MET PHE GLU THR PHE ASN SEQRES 11 A 377 VAL PRO ALA MET TYR VAL ALA ILE GLN ALA VAL LEU SER SEQRES 12 A 377 LEU TYR ALA SER GLY ARG THR THR GLY ILE VAL LEU ASP SEQRES 13 A 377 SER GLY ASP GLY VAL THR HIS ASN VAL PRO ILE TYR GLU SEQRES 14 A 377 GLY TYR ALA LEU PRO HIS ALA ILE MET ARG LEU ASP LEU SEQRES 15 A 377 ALA GLY ARG ASP LEU THR ASP TYR LEU MET LYS ILE LEU SEQRES 16 A 377 SER GLU ARG GLY TYR SER PHE VAL THR THR ALA GLU ARG SEQRES 17 A 377 GLU ILE VAL ARG ASP ILE LYS GLU LYS LEU CYS TYR VAL SEQRES 18 A 377 ALA LEU ASP PHE GLU ASN GLU MET ALA THR ALA ALA SER SEQRES 19 A 377 SER SER SER LEU GLU LYS SER TYR GLU LEU PRO ASP GLY SEQRES 20 A 377 GLN VAL ILE THR ILE GLY ASN GLU ARG PHE ARG CYS PRO SEQRES 21 A 377 GLU THR LEU PHE GLN PRO SER PHE ILE GLY MET GLU SER SEQRES 22 A 377 ALA GLY ILE HIS GLU THR THR TYR ASN SER ILE MET LYS SEQRES 23 A 377 CYS ASP ILE ASP ILE ARG LYS ASP LEU TYR ALA ASN ASN SEQRES 24 A 377 VAL LEU SER GLY GLY THR THR MET TYR PRO GLY ILE ALA SEQRES 25 A 377 ASP ARG MET GLN LYS GLU ILE THR ALA LEU ALA PRO SER SEQRES 26 A 377 THR MET LYS ILE LYS ILE ILE ALA PRO PRO GLU ARG LYS SEQRES 27 A 377 TYR SER VAL TRP ILE GLY GLY SER ILE LEU ALA SER LEU SEQRES 28 A 377 SER THR PHE GLN GLN MET TRP ILE SER LYS GLN GLU TYR SEQRES 29 A 377 ASP GLU ALA GLY PRO SER ILE VAL HIS ARG LYS CYS PHE
HELIX 1 1 ASP A 58 ALA A 60 5 3 HELIX 2 2 ASN A 80 ASN A 94 1 15 HELIX 3 3 ALA A 99 HIS A 103 5 5 HELIX 4 4 PRO A 114 THR A 128 1 15 HELIX 5 5 GLN A 139 SER A 147 1 9 HELIX 6 6 PRO A 174 ILE A 177 5 4 HELIX 7 7 ALA A 183 ARG A 198 1 16 HELIX 8 8 THR A 204 CYS A 219 1 16 HELIX 9 9 ASP A 224 SER A 234 1 11 HELIX 10 10 ASN A 254 GLN A 265 1 12 HELIX 11 11 PRO A 266 ILE A 269 5 4 HELIX 12 12 GLY A 275 CYS A 287 1 13 HELIX 13 13 ASP A 288 ASN A 298 1 11 HELIX 14 14 GLY A 303 TYR A 308 5 6 HELIX 15 15 GLY A 310 ALA A 323 1 14 HELIX 16 16 TYR A 339 LEU A 351 1 13 HELIX 17 17 SER A 352 TRP A 358 5 7 HELIX 18 18 LYS A 361 GLY A 368 1 8 HELIX 19 19 SER A 370 LYS A 375 1 6
SHEET 1 A 6 ALA A 31 PRO A 34 0 SHEET 2 A 6 LEU A 18 PHE A 23 -1 N ALA A 21 O ALA A 31 SHEET 3 A 6 LEU A 10 ASN A 14 -1 N ASP A 13 O LYS A 20 SHEET 4 A 6 THR A 105 GLU A 109 1 O LEU A 106 N LEU A 10 SHEET 5 A 6 ALA A 133 ILE A 138 1 O TYR A 135 N LEU A 107 SHEET 6 A 6 ILE A 359 SER A 360 -1 O ILE A 359 N MET A 134 SHEET 1 B 3 TYR A 55 VAL A 56 0 SHEET 2 B 3 VAL A 37 PRO A 40 -1 N GLY A 38 O TYR A 55 SHEET 3 B 3 LEU A 67 LYS A 70 -1 O THR A 68 N ARG A 39 SHEET 1 C 5 ILE A 331 ILE A 332 0 SHEET 2 C 5 ASN A 299 SER A 302 1 N ASN A 299 O ILE A 332 SHEET 3 C 5 GLY A 152 SER A 157 1 N LEU A 155 O VAL A 300 SHEET 4 C 5 THR A 162 TYR A 168 -1 O ILE A 167 N GLY A 152 SHEET 5 C 5 TYR A 171 ALA A 172 -1 O TYR A 171 N TYR A 168 SHEET 1 D 5 ILE A 331 ILE A 332 0 SHEET 2 D 5 ASN A 299 SER A 302 1 N ASN A 299 O ILE A 332 SHEET 3 D 5 GLY A 152 SER A 157 1 N LEU A 155 O VAL A 300 SHEET 4 D 5 THR A 162 TYR A 168 -1 O ILE A 167 N GLY A 152 SHEET 5 D 5 MET A 178 LEU A 180 -1 O LEU A 180 N THR A 162 SHEET 1 E 2 LYS A 240 GLU A 243 0 SHEET 2 E 2 VAL A 249 ILE A 252 -1 O ILE A 252 N LYS A 240
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000