10 20 30 40 50 60 70 80 1LQ1 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER TRANSCRIPTION/DNA 08-MAY-02 1LQ1
TITLE DNA COMPLEXED STRUCTURE OF THE KEY TRANSCRIPTION FACTOR TITLE 2 INITIATING DEVELOPMENT IN SPORULATION BACTERIA
COMPND MOL_ID: 1; COMPND 2 MOLECULE: 5'- COMPND 3 D(*TP*TP*CP*GP*TP*GP*TP*CP*GP*AP*AP*TP*TP*TP*TP*G)-3'; COMPND 4 CHAIN: E, G; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: 5'- COMPND 8 D(*AP*CP*AP*AP*AP*AP*TP*TP*CP*GP*AP*CP*AP*CP*GP*A)-3'; COMPND 9 CHAIN: F, H; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: STAGE 0 SPORULATION PROTEIN A; COMPND 13 CHAIN: A, B, C, D; COMPND 14 FRAGMENT: C-TERMINAL DOMAIN; COMPND 15 SYNONYM: TRANSCRIPTION FACTOR SPO0A; COMPND 16 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 MOL_ID: 2; SOURCE 4 SYNTHETIC: YES; SOURCE 5 MOL_ID: 3; SOURCE 6 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS; SOURCE 7 ORGANISM_TAXID: 1423; SOURCE 8 GENE: SPO0A; SOURCE 9 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 11 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 12 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 13 EXPRESSION_SYSTEM_PLASMID: PET16B
KEYWDS SPO0A, TRANSCRIPTIONAL ACTIVATION AND REPRESSION, 0A BOX, KEYWDS 2 DNA COMPLEXED STRUCTURE, TRANSCRIPTION/DNA COMPLEX
EXPDTA X-RAY DIFFRACTION
AUTHOR H.ZHAO,T.MSADEK,J.ZAPF,MADHUSUDAN,J.A.HOCH,K.I.VARUGHESE
REVDAT 3 24-FEB-09 1LQ1 1 VERSN REVDAT 2 01-APR-03 1LQ1 1 JRNL REVDAT 1 23-AUG-02 1LQ1 0
JRNL AUTH H.ZHAO,T.MSADEK,J.ZAPF,MADHUSUDAN,J.A.HOCH, JRNL AUTH 2 K.I.VARUGHESE JRNL TITL DNA COMPLEXED STRUCTURE OF THE KEY TRANSCRIPTION JRNL TITL 2 FACTOR INITIATING DEVELOPMENT IN SPORULATING JRNL TITL 3 BACTERIA. JRNL REF STRUCTURE V. 10 1041 2002 JRNL REFN ISSN 0969-2126 JRNL PMID 12176382 JRNL DOI 10.1016/S0969-2126(02)00803-1
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 32181 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.217 REMARK 3 FREE R VALUE : 0.258 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1640 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.44 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 80.00 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 4279 REMARK 3 BIN R VALUE (WORKING SET) : 0.3460 REMARK 3 BIN FREE R VALUE : 0.4090 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.00 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 227 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.027 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3365 REMARK 3 NUCLEIC ACID ATOMS : 1300 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 244 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 44.14 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 65.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 18.27000 REMARK 3 B22 (A**2) : -9.41000 REMARK 3 B33 (A**2) : -8.87000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -21.85000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.33 REMARK 3 ESD FROM SIGMAA (A) : 0.44 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.42 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.51 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 1.30 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 19.20 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.14 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : OVERALL ANISOTROPIC REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 4.010 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 6.220 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 5.820 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 8.370 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : DNA-RNA_REP.PARAM REMARK 3 PARAMETER FILE 3 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 4 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : DNA-RNA.TOP REMARK 3 TOPOLOGY FILE 3 : WATER.TOP REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1LQ1 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-JUN-02. REMARK 100 THE RCSB ID CODE IS RCSB016171.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-JAN-01 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL7-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.08000 REMARK 200 MONOCHROMATOR : HORIZONTAL FOCUS MONOCHROMATOR REMARK 200 OPTICS : 58 CM LONG, PT-COATED, FUSED REMARK 200 SILICA, VERTICAL FOCUS MIRROR; REMARK 200 CYCLINDRICALLY BENT TRIANGULAR REMARK 200 SI(111) ASYMMETRIC CUT, REMARK 200 HORIZONTAL FOCUS MONOCHROMATOR REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37147 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 1.0 REMARK 200 DATA REDUNDANCY : 7.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05500 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 13.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 1.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.00 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.64600 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.61 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG3350, SODIUM CHLORIDE, CALCIUM REMARK 280 CHLORIDE, TRIS-HCL, ISO-PROPANOL, PH 7.0, VAPOR DIFFUSION, REMARK 280 TEMPERATURE 295K
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 41.65050 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS THE REMARK 300 TANDEM DIMER BETWEEN TWO REMARK 300 SPO0AC.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, F, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: G, H, A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PRO A 148 REMARK 465 LYS A 149 REMARK 465 GLY A 237 REMARK 465 TYR A 238 REMARK 465 THR A 239 REMARK 465 VAL A 240 REMARK 465 SER A 241 REMARK 465 MET A 242 REMARK 465 THR A 243 REMARK 465 LYS A 244 REMARK 465 LYS A 265 REMARK 465 ALA A 266 REMARK 465 SER A 267 REMARK 465 PRO B 148 REMARK 465 LYS B 149 REMARK 465 LYS B 150 REMARK 465 LYS B 151 REMARK 465 GLY B 237 REMARK 465 TYR B 238 REMARK 465 THR B 239 REMARK 465 VAL B 240 REMARK 465 SER B 241 REMARK 465 MET B 242 REMARK 465 THR B 243 REMARK 465 LYS B 244 REMARK 465 GLU B 263 REMARK 465 HIS B 264 REMARK 465 LYS B 265 REMARK 465 ALA B 266 REMARK 465 SER B 267 REMARK 465 PRO C 148 REMARK 465 LYS C 149 REMARK 465 LYS C 150 REMARK 465 VAL C 240 REMARK 465 SER C 241 REMARK 465 MET C 242 REMARK 465 THR C 243 REMARK 465 SER C 267 REMARK 465 PRO D 148 REMARK 465 LYS D 149 REMARK 465 LYS D 150 REMARK 465 GLY D 237 REMARK 465 TYR D 238 REMARK 465 THR D 239 REMARK 465 VAL D 240 REMARK 465 SER D 241 REMARK 465 MET D 242 REMARK 465 THR D 243 REMARK 465 LYS D 265 REMARK 465 ALA D 266 REMARK 465 SER D 267
REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS(M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN B 228 CG OD1 ND2 REMARK 470 ASP C 230 CG OD1 OD2 REMARK 470 TYR C 238 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 THR C 239 OG1 CG2
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DT E 13 C5 DT E 13 C7 0.043 REMARK 500 DT E 14 C5 DT E 14 C7 0.041 REMARK 500 DT E 15 C5 DT E 15 C7 0.051 REMARK 500 DT G 15 C5 DT G 15 C7 0.051 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DC E 8 O4' - C1' - N1 ANGL. DEV. = 2.3 DEGREES REMARK 500 DT E 13 N1 - C1' - C2' ANGL. DEV. = 8.5 DEGREES REMARK 500 DT E 13 C6 - C5 - C7 ANGL. DEV. = -3.7 DEGREES REMARK 500 DT E 14 O4' - C1' - N1 ANGL. DEV. = 2.1 DEGREES REMARK 500 DT E 14 C6 - C5 - C7 ANGL. DEV. = -3.6 DEGREES REMARK 500 DT E 15 O4' - C4' - C3' ANGL. DEV. = -3.4 DEGREES REMARK 500 DC F 126 O4' - C1' - N1 ANGL. DEV. = 2.6 DEGREES REMARK 500 DG F 129 O4' - C1' - N9 ANGL. DEV. = 2.6 DEGREES REMARK 500 DG G 9 O4' - C1' - N9 ANGL. DEV. = 2.3 DEGREES REMARK 500 DT G 15 OP1 - P - OP2 ANGL. DEV. = -9.7 DEGREES REMARK 500 DT G 15 C4 - C5 - C6 ANGL. DEV. = 4.5 DEGREES REMARK 500 DC H 126 O4' - C1' - N1 ANGL. DEV. = 1.9 DEGREES REMARK 500 PRO A 247 CA - N - CD ANGL. DEV. = -13.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 192 53.72 -140.96 REMARK 500 LEU A 197 -75.00 -48.67 REMARK 500 SER A 225 -71.86 -84.96 REMARK 500 ASN A 228 95.09 -67.62 REMARK 500 ILE A 229 -16.50 -49.15 REMARK 500 LEU B 153 -71.55 -54.79 REMARK 500 SER B 156 -72.65 -76.35 REMARK 500 ASP B 186 85.82 -163.72 REMARK 500 VAL B 196 -82.49 -118.34 REMARK 500 ASN B 206 81.04 35.36 REMARK 500 ARG B 226 76.57 -105.94 REMARK 500 ASN B 228 99.93 -43.47 REMARK 500 ARG C 226 22.80 -144.58 REMARK 500 SER C 233 -48.56 -27.94 REMARK 500 SER C 234 7.36 -69.37 REMARK 500 LEU C 235 -37.02 -141.43 REMARK 500 ARG C 261 -73.12 -55.18 REMARK 500 VAL D 196 -50.29 -125.22 REMARK 500 SER D 225 -67.87 -96.83 REMARK 500 ILE D 229 5.04 -67.10 REMARK 500 GLU D 263 -4.08 -53.12 REMARK 500 REMARK 500 REMARK: NULL
REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH D 431 DISTANCE = 6.69 ANGSTROMS
DBREF 1LQ1 A 148 267 UNP P06534 SP0A_BACSU 148 267 DBREF 1LQ1 B 148 267 UNP P06534 SP0A_BACSU 148 267 DBREF 1LQ1 C 148 267 UNP P06534 SP0A_BACSU 148 267 DBREF 1LQ1 D 148 267 UNP P06534 SP0A_BACSU 148 267 DBREF 1LQ1 E 1 16 PDB 1LQ1 1LQ1 1 16 DBREF 1LQ1 F 115 130 PDB 1LQ1 1LQ1 115 130 DBREF 1LQ1 G 1 16 PDB 1LQ1 1LQ1 1 16 DBREF 1LQ1 H 115 130 PDB 1LQ1 1LQ1 115 130
SEQRES 1 E 16 DT DT DC DG DT DG DT DC DG DA DA DT DT SEQRES 2 E 16 DT DT DG SEQRES 1 F 16 DA DC DA DA DA DA DT DT DC DG DA DC DA SEQRES 2 F 16 DC DG DA SEQRES 1 G 16 DT DT DC DG DT DG DT DC DG DA DA DT DT SEQRES 2 G 16 DT DT DG SEQRES 1 H 16 DA DC DA DA DA DA DT DT DC DG DA DC DA SEQRES 2 H 16 DC DG DA SEQRES 1 A 120 PRO LYS LYS LYS ASN LEU ASP ALA SER ILE THR SER ILE SEQRES 2 A 120 ILE HIS GLU ILE GLY VAL PRO ALA HIS ILE LYS GLY TYR SEQRES 3 A 120 LEU TYR LEU ARG GLU ALA ILE SER MET VAL TYR ASN ASP SEQRES 4 A 120 ILE GLU LEU LEU GLY SER ILE THR LYS VAL LEU TYR PRO SEQRES 5 A 120 ASP ILE ALA LYS LYS PHE ASN THR THR ALA SER ARG VAL SEQRES 6 A 120 GLU ARG ALA ILE ARG HIS ALA ILE GLU VAL ALA TRP SER SEQRES 7 A 120 ARG GLY ASN ILE ASP SER ILE SER SER LEU PHE GLY TYR SEQRES 8 A 120 THR VAL SER MET THR LYS ALA LYS PRO THR ASN SER GLU SEQRES 9 A 120 PHE ILE ALA MET VAL ALA ASP LYS LEU ARG LEU GLU HIS SEQRES 10 A 120 LYS ALA SER SEQRES 1 B 120 PRO LYS LYS LYS ASN LEU ASP ALA SER ILE THR SER ILE SEQRES 2 B 120 ILE HIS GLU ILE GLY VAL PRO ALA HIS ILE LYS GLY TYR SEQRES 3 B 120 LEU TYR LEU ARG GLU ALA ILE SER MET VAL TYR ASN ASP SEQRES 4 B 120 ILE GLU LEU LEU GLY SER ILE THR LYS VAL LEU TYR PRO SEQRES 5 B 120 ASP ILE ALA LYS LYS PHE ASN THR THR ALA SER ARG VAL SEQRES 6 B 120 GLU ARG ALA ILE ARG HIS ALA ILE GLU VAL ALA TRP SER SEQRES 7 B 120 ARG GLY ASN ILE ASP SER ILE SER SER LEU PHE GLY TYR SEQRES 8 B 120 THR VAL SER MET THR LYS ALA LYS PRO THR ASN SER GLU SEQRES 9 B 120 PHE ILE ALA MET VAL ALA ASP LYS LEU ARG LEU GLU HIS SEQRES 10 B 120 LYS ALA SER SEQRES 1 C 120 PRO LYS LYS LYS ASN LEU ASP ALA SER ILE THR SER ILE SEQRES 2 C 120 ILE HIS GLU ILE GLY VAL PRO ALA HIS ILE LYS GLY TYR SEQRES 3 C 120 LEU TYR LEU ARG GLU ALA ILE SER MET VAL TYR ASN ASP SEQRES 4 C 120 ILE GLU LEU LEU GLY SER ILE THR LYS VAL LEU TYR PRO SEQRES 5 C 120 ASP ILE ALA LYS LYS PHE ASN THR THR ALA SER ARG VAL SEQRES 6 C 120 GLU ARG ALA ILE ARG HIS ALA ILE GLU VAL ALA TRP SER SEQRES 7 C 120 ARG GLY ASN ILE ASP SER ILE SER SER LEU PHE GLY TYR SEQRES 8 C 120 THR VAL SER MET THR LYS ALA LYS PRO THR ASN SER GLU SEQRES 9 C 120 PHE ILE ALA MET VAL ALA ASP LYS LEU ARG LEU GLU HIS SEQRES 10 C 120 LYS ALA SER SEQRES 1 D 120 PRO LYS LYS LYS ASN LEU ASP ALA SER ILE THR SER ILE SEQRES 2 D 120 ILE HIS GLU ILE GLY VAL PRO ALA HIS ILE LYS GLY TYR SEQRES 3 D 120 LEU TYR LEU ARG GLU ALA ILE SER MET VAL TYR ASN ASP SEQRES 4 D 120 ILE GLU LEU LEU GLY SER ILE THR LYS VAL LEU TYR PRO SEQRES 5 D 120 ASP ILE ALA LYS LYS PHE ASN THR THR ALA SER ARG VAL SEQRES 6 D 120 GLU ARG ALA ILE ARG HIS ALA ILE GLU VAL ALA TRP SER SEQRES 7 D 120 ARG GLY ASN ILE ASP SER ILE SER SER LEU PHE GLY TYR SEQRES 8 D 120 THR VAL SER MET THR LYS ALA LYS PRO THR ASN SER GLU SEQRES 9 D 120 PHE ILE ALA MET VAL ALA ASP LYS LEU ARG LEU GLU HIS SEQRES 10 D 120 LYS ALA SER
FORMUL 9 HOH *244(H2 O)
HELIX 1 1 ASN A 152 GLY A 165 1 14 HELIX 2 2 ILE A 170 ASP A 186 1 17 HELIX 3 3 ILE A 187 SER A 192 5 6 HELIX 4 4 VAL A 196 PHE A 205 1 10 HELIX 5 5 THR A 208 ARG A 226 1 19 HELIX 6 6 ASP A 230 PHE A 236 1 7 HELIX 7 7 THR A 248 GLU A 263 1 16 HELIX 8 8 ASN B 152 ILE B 164 1 13 HELIX 9 9 ILE B 170 ILE B 180 1 11 HELIX 10 10 ASP B 186 GLY B 191 5 6 HELIX 11 11 VAL B 196 PHE B 205 1 10 HELIX 12 12 THR B 208 ARG B 226 1 19 HELIX 13 13 ASN B 228 PHE B 236 1 9 HELIX 14 14 THR B 248 LEU B 262 1 15 HELIX 15 15 ASN C 152 GLY C 165 1 14 HELIX 16 16 ILE C 170 ASP C 186 1 17 HELIX 17 17 ILE C 187 GLY C 191 5 5 HELIX 18 18 VAL C 196 PHE C 205 1 10 HELIX 19 19 THR C 208 GLY C 227 1 20 HELIX 20 20 ASN C 228 SER C 234 1 7 HELIX 21 21 THR C 248 LEU C 262 1 15 HELIX 22 22 ASN D 152 GLY D 165 1 14 HELIX 23 23 ILE D 170 ASP D 186 1 17 HELIX 24 24 ILE D 187 SER D 192 5 6 HELIX 25 25 VAL D 196 PHE D 205 1 10 HELIX 26 26 THR D 208 ARG D 226 1 19 HELIX 27 27 ASP D 230 LEU D 235 1 6 HELIX 28 28 THR D 248 GLU D 263 1 16
CRYST1 50.917 83.301 91.241 90.00 94.18 90.00 P 1 21 1 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.019640 0.000000 0.001435 0.00000
SCALE2 0.000000 0.012005 0.000000 0.00000
SCALE3 0.000000 0.000000 0.010989 0.00000