10 20 30 40 50 60 70 80 1LPA - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER HYDROLASE(CARBOXYLIC ESTERASE) 19-AUG-94 1LPA
TITLE INTERFACIAL ACTIVATION OF THE LIPASE-PROCOLIPASE COMPLEX BY TITLE 2 MIXED MICELLES REVEALED BY X-RAY CRYSTALLOGRAPHY
COMPND MOL_ID: 1; COMPND 2 MOLECULE: COLIPASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: LIPASE; COMPND 7 CHAIN: B; COMPND 8 EC: 3.1.1.3; COMPND 9 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SUS SCROFA; SOURCE 3 ORGANISM_COMMON: PIG; SOURCE 4 ORGANISM_TAXID: 9823; SOURCE 5 ORGAN: PANCREAS; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 8 ORGANISM_COMMON: HUMAN; SOURCE 9 ORGANISM_TAXID: 9606; SOURCE 10 ORGAN: PANCREAS
KEYWDS HYDROLASE(CARBOXYLIC ESTERASE)
EXPDTA X-RAY DIFFRACTION
AUTHOR H.VAN TILBEURGH,M.-P.EGLOFF,C.CAMBILLAU
REVDAT 3 24-FEB-09 1LPA 1 VERSN REVDAT 2 01-APR-03 1LPA 1 JRNL REVDAT 1 01-NOV-94 1LPA 0
JRNL AUTH H.VAN TILBEURGH,M.P.EGLOFF,C.MARTINEZ,N.RUGANI, JRNL AUTH 2 R.VERGER,C.CAMBILLAU JRNL TITL INTERFACIAL ACTIVATION OF THE LIPASE-PROCOLIPASE JRNL TITL 2 COMPLEX BY MIXED MICELLES REVEALED BY X-RAY JRNL TITL 3 CRYSTALLOGRAPHY. JRNL REF NATURE V. 362 814 1993 JRNL REFN ISSN 0028-0836 JRNL PMID 8479519 JRNL DOI 10.1038/362814A0
REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH M.-P.EGLOFF,F.MARGUET,G.BUONO,R.VERGER,C.CAMBILLAU, REMARK 1 AUTH 2 H.VAN TILBEURGH REMARK 1 TITL THE 2.46 ANGSTROMS RESOLUTION STRUCTURE OF THE REMARK 1 TITL 2 PANCREATIC LIPASE COLIPASE COMPLEX INHIBITED BY A REMARK 1 TITL 3 C11 ALKYL PHOSPHONATE REMARK 1 REF TO BE PUBLISHED REMARK 1 REFN REMARK 1 REFERENCE 2 REMARK 1 AUTH H.VAN TILBEURGH,L.SARDA,R.VERGER,C.CAMBILLAU REMARK 1 TITL STRUCTURE OF THE PANCREATIC LIPASE-PROCOLIPASE REMARK 1 TITL 2 COMPLEX REMARK 1 REF NATURE V. 359 159 1992 REMARK 1 REFN ISSN 0028-0836
REMARK 2 REMARK 2 RESOLUTION. 3.04 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.04 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 8.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 1.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : NULL REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : 0.186 REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4132 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 63 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.016 REMARK 3 BOND ANGLES (DEGREES) : 3.60 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1LPA COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: X-PLOR REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.44 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 42 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 66.70000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 66.70000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 46.30000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 66.70000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 66.70000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 46.30000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 66.70000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 66.70000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 46.30000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 66.70000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 66.70000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 46.30000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 VAL A 1 REMARK 465 PRO A 2 REMARK 465 ASP A 3 REMARK 465 PRO A 4 REMARK 465 ARG A 5 REMARK 465 GLY A 91 REMARK 465 ARG A 92 REMARK 465 SER A 93 REMARK 465 ASP A 94 REMARK 465 SER A 95
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 HIS A 30 NE2 HIS A 30 CD2 -0.076 REMARK 500 HIS A 88 NE2 HIS A 88 CD2 -0.072 REMARK 500 HIS B 26 NE2 HIS B 26 CD2 -0.070 REMARK 500 HIS B 75 NE2 HIS B 75 CD2 -0.104 REMARK 500 HIS B 156 NE2 HIS B 156 CD2 -0.076 REMARK 500 HIS B 223 NE2 HIS B 223 CD2 -0.068 REMARK 500 HIS B 263 NE2 HIS B 263 CD2 -0.073 REMARK 500 HIS B 309 NE2 HIS B 309 CD2 -0.073 REMARK 500 HIS B 354 NE2 HIS B 354 CD2 -0.072 REMARK 500 HIS B 382 NE2 HIS B 382 CD2 -0.071 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 CYS A 17 N - CA - CB ANGL. DEV. = -12.1 DEGREES REMARK 500 SER A 25 CA - C - N ANGL. DEV. = 13.6 DEGREES REMARK 500 LEU A 37 CA - CB - CG ANGL. DEV. = 15.0 DEGREES REMARK 500 ARG A 38 NE - CZ - NH2 ANGL. DEV. = -4.1 DEGREES REMARK 500 ARG A 44 NE - CZ - NH1 ANGL. DEV. = 6.0 DEGREES REMARK 500 ARG A 44 NE - CZ - NH2 ANGL. DEV. = -4.5 DEGREES REMARK 500 LEU A 54 CA - CB - CG ANGL. DEV. = 18.3 DEGREES REMARK 500 TYR A 59 CB - CG - CD1 ANGL. DEV. = -4.4 DEGREES REMARK 500 ARG A 65 NE - CZ - NH1 ANGL. DEV. = 5.0 DEGREES REMARK 500 ARG A 65 NE - CZ - NH2 ANGL. DEV. = -4.9 DEGREES REMARK 500 ASP A 72 CA - C - N ANGL. DEV. = -14.8 DEGREES REMARK 500 VAL A 90 CA - CB - CG2 ANGL. DEV. = 9.4 DEGREES REMARK 500 VAL B 3 CA - CB - CG2 ANGL. DEV. = -9.2 DEGREES REMARK 500 LEU B 8 CB - CG - CD1 ANGL. DEV. = -10.3 DEGREES REMARK 500 TRP B 17 CD1 - CG - CD2 ANGL. DEV. = 7.5 DEGREES REMARK 500 TRP B 17 CE2 - CD2 - CG ANGL. DEV. = -6.4 DEGREES REMARK 500 TRP B 30 CD1 - CG - CD2 ANGL. DEV. = 9.0 DEGREES REMARK 500 TRP B 30 CG - CD1 - NE1 ANGL. DEV. = -7.1 DEGREES REMARK 500 TRP B 30 CE2 - CD2 - CG ANGL. DEV. = -5.9 DEGREES REMARK 500 SER B 30A N - CA - C ANGL. DEV. = 17.9 DEGREES REMARK 500 TRP B 30 CA - C - N ANGL. DEV. = -14.7 DEGREES REMARK 500 ARG B 68 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 ARG B 68 NE - CZ - NH2 ANGL. DEV. = -3.9 DEGREES REMARK 500 TRP B 85 CD1 - CG - CD2 ANGL. DEV. = 6.9 DEGREES REMARK 500 TRP B 85 CE2 - CD2 - CG ANGL. DEV. = -5.9 DEGREES REMARK 500 TRP B 106 CD1 - CG - CD2 ANGL. DEV. = 6.2 DEGREES REMARK 500 TRP B 106 CE2 - CD2 - CG ANGL. DEV. = -6.0 DEGREES REMARK 500 VAL B 148 CG1 - CB - CG2 ANGL. DEV. = -9.7 DEGREES REMARK 500 ARG B 163 NE - CZ - NH2 ANGL. DEV. = -3.9 DEGREES REMARK 500 ASN B 166 CA - C - N ANGL. DEV. = -15.5 DEGREES REMARK 500 ARG B 171 CA - CB - CG ANGL. DEV. = 13.2 DEGREES REMARK 500 ASP B 195 CB - CG - OD1 ANGL. DEV. = 5.9 DEGREES REMARK 500 GLN B 244 N - CA - C ANGL. DEV. = -18.2 DEGREES REMARK 500 ILE B 248 CA - C - N ANGL. DEV. = -13.7 DEGREES REMARK 500 ASP B 249 CA - C - N ANGL. DEV. = -12.5 DEGREES REMARK 500 TRP B 252 CD1 - CG - CD2 ANGL. DEV. = 7.1 DEGREES REMARK 500 TRP B 252 CE2 - CD2 - CG ANGL. DEV. = -6.4 DEGREES REMARK 500 ARG B 265 NE - CZ - NH1 ANGL. DEV. = 4.7 DEGREES REMARK 500 ARG B 265 NE - CZ - NH2 ANGL. DEV. = -5.3 DEGREES REMARK 500 TYR B 270 CB - CG - CD2 ANGL. DEV. = -4.1 DEGREES REMARK 500 TYR B 288 CB - CG - CD2 ANGL. DEV. = -3.8 DEGREES REMARK 500 SER B 301 N - CA - C ANGL. DEV. = -16.6 DEGREES REMARK 500 TYR B 314 CB - CG - CD1 ANGL. DEV. = -4.2 DEGREES REMARK 500 ASN B 334 N - CA - CB ANGL. DEV. = 12.8 DEGREES REMARK 500 SER B 333 CA - C - N ANGL. DEV. = -22.1 DEGREES REMARK 500 SER B 333 O - C - N ANGL. DEV. = 14.8 DEGREES REMARK 500 ASN B 334 C - N - CA ANGL. DEV. = 18.1 DEGREES REMARK 500 TRP B 338 CD1 - CG - CD2 ANGL. DEV. = 6.4 DEGREES REMARK 500 TRP B 338 CE2 - CD2 - CG ANGL. DEV. = -6.3 DEGREES REMARK 500 TRP B 402 CD1 - CG - CD2 ANGL. DEV. = 5.5 DEGREES REMARK 500 REMARK 500 THIS ENTRY HAS 52 ANGLE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 8 -6.61 -149.88 REMARK 500 CYS A 27 104.67 -165.04 REMARK 500 GLU A 64 -178.78 -67.07 REMARK 500 SER A 74 -35.65 -28.34 REMARK 500 THR A 80 -94.82 -178.97 REMARK 500 ASN A 83 68.05 -69.72 REMARK 500 ARG B 7 -47.84 69.39 REMARK 500 ASP B 13 29.07 -75.96 REMARK 500 TRP B 30 -176.26 -69.71 REMARK 500 SER B 30A -108.67 91.25 REMARK 500 PRO B 31 -28.00 -27.71 REMARK 500 ASN B 35 73.33 55.14 REMARK 500 ILE B 78 -35.97 67.69 REMARK 500 SER B 152 -114.99 54.86 REMARK 500 ASN B 166 94.22 1.03 REMARK 500 ASP B 176 78.64 41.13 REMARK 500 CYS B 181 14.65 81.57 REMARK 500 PHE B 182 -47.22 -144.57 REMARK 500 ASP B 205 50.67 -160.70 REMARK 500 PHE B 227 76.63 -115.80 REMARK 500 LYS B 238 44.96 -108.98 REMARK 500 GLN B 244 -65.02 177.87 REMARK 500 ASP B 249 109.56 46.35 REMARK 500 ALA B 260 38.53 -146.63 REMARK 500 ASN B 334 85.34 83.01 REMARK 500 ASP B 379 -10.99 76.94 REMARK 500 ILE B 408 105.60 -51.54 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 TRP B 30 SER B 30A 141.29 REMARK 500 SER B 30A PRO B 31 -74.93 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG B 111 0.09 SIDE_CHAIN REMARK 500 REMARK 500 REMARK: NULL
REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 BNG B 450
REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 451 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 187 O REMARK 620 2 ARG B 190 O 97.9 REMARK 620 3 ASP B 192 OD1 86.5 94.1 REMARK 620 4 ASP B 195 OD1 123.6 133.5 71.0 REMARK 620 5 ASP B 195 OD2 154.7 80.3 68.6 53.3 REMARK 620 N 1 2 3 4
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: CAT REMARK 800 EVIDENCE_CODE: UNKNOWN REMARK 800 SITE_DESCRIPTION: NULL REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BNG B 450 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 451 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PLC B 452
DBREF 1LPA A 1 95 UNP P02703 COL_PIG 1 95 DBREF 1LPA B 1 449 UNP P16233 LIPP_HUMAN 17 465
SEQRES 1 A 95 VAL PRO ASP PRO ARG GLY ILE ILE ILE ASN LEU ASP GLU SEQRES 2 A 95 GLY GLU LEU CYS LEU ASN SER ALA GLN CYS LYS SER ASN SEQRES 3 A 95 CYS CYS GLN HIS ASP THR ILE LEU SER LEU LEU ARG CYS SEQRES 4 A 95 ALA LEU LYS ALA ARG GLU ASN SER GLU CYS SER ALA PHE SEQRES 5 A 95 THR LEU TYR GLY VAL TYR TYR LYS CYS PRO CYS GLU ARG SEQRES 6 A 95 GLY LEU THR CYS GLU GLY ASP LYS SER LEU VAL GLY SER SEQRES 7 A 95 ILE THR ASN THR ASN PHE GLY ILE CYS HIS ASN VAL GLY SEQRES 8 A 95 ARG SER ASP SER SEQRES 1 B 449 LYS GLU VAL CYS TYR GLU ARG LEU GLY CYS PHE SER ASP SEQRES 2 B 449 ASP SER PRO TRP SER GLY ILE THR GLU ARG PRO LEU HIS SEQRES 3 B 449 ILE LEU PRO TRP SER PRO LYS ASP VAL ASN THR ARG PHE SEQRES 4 B 449 LEU LEU TYR THR ASN GLU ASN PRO ASN ASN PHE GLN GLU SEQRES 5 B 449 VAL ALA ALA ASP SER SER SER ILE SER GLY SER ASN PHE SEQRES 6 B 449 LYS THR ASN ARG LYS THR ARG PHE ILE ILE HIS GLY PHE SEQRES 7 B 449 ILE ASP LYS GLY GLU GLU ASN TRP LEU ALA ASN VAL CYS SEQRES 8 B 449 LYS ASN LEU PHE LYS VAL GLU SER VAL ASN CYS ILE CYS SEQRES 9 B 449 VAL ASP TRP LYS GLY GLY SER ARG THR GLY TYR THR GLN SEQRES 10 B 449 ALA SER GLN ASN ILE ARG ILE VAL GLY ALA GLU VAL ALA SEQRES 11 B 449 TYR PHE VAL GLU PHE LEU GLN SER ALA PHE GLY TYR SER SEQRES 12 B 449 PRO SER ASN VAL HIS VAL ILE GLY HIS SER LEU GLY ALA SEQRES 13 B 449 HIS ALA ALA GLY GLU ALA GLY ARG ARG THR ASN GLY THR SEQRES 14 B 449 ILE GLY ARG ILE THR GLY LEU ASP PRO ALA GLU PRO CYS SEQRES 15 B 449 PHE GLN GLY THR PRO GLU LEU VAL ARG LEU ASP PRO SER SEQRES 16 B 449 ASP ALA LYS PHE VAL ASP VAL ILE HIS THR ASP GLY ALA SEQRES 17 B 449 PRO ILE VAL PRO ASN LEU GLY PHE GLY MET SER GLN VAL SEQRES 18 B 449 VAL GLY HIS LEU ASP PHE PHE PRO ASN GLY GLY VAL GLU SEQRES 19 B 449 MET PRO GLY CYS LYS LYS ASN ILE LEU SER GLN ILE VAL SEQRES 20 B 449 ASP ILE ASP GLY ILE TRP GLU GLY THR ARG ASP PHE ALA SEQRES 21 B 449 ALA CYS ASN HIS LEU ARG SER TYR LYS TYR TYR THR ASP SEQRES 22 B 449 SER ILE VAL ASN PRO ASP GLY PHE ALA GLY PHE PRO CYS SEQRES 23 B 449 ALA SER TYR ASN VAL PHE THR ALA ASN LYS CYS PHE PRO SEQRES 24 B 449 CYS PRO SER GLY GLY CYS PRO GLN MET GLY HIS TYR ALA SEQRES 25 B 449 ASP ARG TYR PRO GLY LYS THR ASN ASP VAL GLY GLN LYS SEQRES 26 B 449 PHE TYR LEU ASP THR GLY ASP ALA SER ASN PHE ALA ARG SEQRES 27 B 449 TRP ARG TYR LYS VAL SER VAL THR LEU SER GLY LYS LYS SEQRES 28 B 449 VAL THR GLY HIS ILE LEU VAL SER LEU PHE GLY ASN LYS SEQRES 29 B 449 GLY ASN SER LYS GLN TYR GLU ILE PHE LYS GLY THR LEU SEQRES 30 B 449 LYS PRO ASP SER THR HIS SER ASN GLU PHE ASP SER ASP SEQRES 31 B 449 VAL ASP VAL GLY ASP LEU GLN MET VAL LYS PHE ILE TRP SEQRES 32 B 449 TYR ASN ASN VAL ILE ASN PRO THR LEU PRO ARG VAL GLY SEQRES 33 B 449 ALA SER LYS ILE ILE VAL GLU THR ASN VAL GLY LYS GLN SEQRES 34 B 449 PHE ASN PHE CYS SER PRO GLU THR VAL ARG GLU GLU VAL SEQRES 35 B 449 LEU LEU THR LEU THR PRO CYS
HET BNG B 450 20 HET CA B 451 1 HET PLC B 452 42
HETNAM BNG B-NONYLGLUCOSIDE HETNAM CA CALCIUM ION HETNAM PLC DIUNDECYL PHOSPHATIDYL CHOLINE
FORMUL 3 BNG C15 H30 O6 FORMUL 4 CA CA 2+ FORMUL 5 PLC C32 H65 N O8 P 1+
HELIX 1 A ASP A 31 LEU A 34 1 4 HELIX 2 B GLY A 56 CYS A 61 1 6 HELIX 3 J LEU A 75 THR A 80 1 6 HELIX 4 D LYS B 107 SER B 110 1 4 HELIX 5 E TYR B 114 PHE B 139 1 26 HELIX 6 F LEU B 153 ARG B 163 1 11 HELIX 7 G ILE B 241 ILE B 245 1THE TWO HELICES OF THE LID 5 HELIX 8 H ILE B 251 ILE B 274 1 24 HELIX 9 I TYR B 288 THR B 292 1 5
SHEET 1 SA 2 GLU B 2 TYR B 5 0 SHEET 2 SA 2 ILE A 9 ASP A 12 -1 SHEET 1 SB 9 LEU A 37 LEU A 41 0 SHEET 2 SB 9 SER A 50 PHE A 52 -1 SHEET 3 SB 9 GLU A 70 SER A 74 -1 SHEET 4 SB 9 ASN B 100 ASP B 105 1 SHEET 5 SB 9 VAL B 146 HIS B 151 1 SHEET 6 SB 9 ARG B 171 LEU B 175 1 SHEET 7 SB 9 VAL B 199 ILE B 202 1 SHEET 8 SB 9 LEU B 224 PRO B 228 1 SHEET 9 SB 9 GLN B 323 LEU B 327 1 SHEET 1 SC 4 TRP B 338 GLY B 348 0 SHEET 2 SC 4 THR B 381 SER B 388 -1 SHEET 3 SC 4 VAL B 415 THR B 424 -1 SHEET 4 SC 4 GLN B 429 CYS B 433 -1 SHEET 1 SD 4 VAL B 351 GLY B 361 0 SHEET 2 SD 4 TYR B 369 LEU B 376 -1 SHEET 3 SD 4 LEU B 395 TYR B 403 -1 SHEET 4 SD 4 LEU B 444 PRO B 448 -1 SHEET 1 SE 1 LEU A 67 GLU A 70 0 SHEET 1 SF 1 PHE A 84 ASN A 89 0
SSBOND 1 CYS A 17 CYS A 28 1555 1555 2.00 SSBOND 2 CYS A 23 CYS A 39 1555 1555 2.03 SSBOND 3 CYS A 27 CYS A 61 1555 1555 2.00 SSBOND 4 CYS A 49 CYS A 69 1555 1555 2.00 SSBOND 5 CYS A 63 CYS A 87 1555 1555 2.00 SSBOND 6 CYS B 4 CYS B 10 1555 1555 2.01 SSBOND 7 CYS B 90 CYS B 101 1555 1555 2.05 SSBOND 8 CYS B 237 CYS B 261 1555 1555 2.05 SSBOND 9 CYS B 285 CYS B 296 1555 1555 2.01 SSBOND 10 CYS B 299 CYS B 304 1555 1555 2.01 SSBOND 11 CYS B 433 CYS B 449 1555 1555 2.02
LINK CA CA B 451 O GLU B 187 1555 1555 1.63 LINK CA CA B 451 O ARG B 190 1555 1555 1.64 LINK CA CA B 451 OD1 ASP B 192 1555 1555 2.56 LINK CA CA B 451 OD1 ASP B 195 1555 1555 2.31 LINK CA CA B 451 OD2 ASP B 195 1555 1555 2.43
CISPEP 1 SER B 15 PRO B 16 0 3.73 CISPEP 2 VAL B 210 PRO B 211 0 8.42 CISPEP 3 PHE B 297 PRO B 298 0 -1.54
SITE 1 CAT 3 SER B 152 ASP B 176 HIS B 263 SITE 1 AC1 8 LYS B 80 GLU B 83 ASN B 84 ARG B 111 SITE 2 AC1 8 THR B 112 GLY B 113 TRP B 252 PLC B 452 SITE 1 AC2 4 GLU B 187 ARG B 190 ASP B 192 ASP B 195 SITE 1 AC3 13 GLY B 76 PHE B 77 ILE B 78 TYR B 114 SITE 2 AC3 13 SER B 152 LEU B 153 ALA B 178 LEU B 213 SITE 3 AC3 13 PHE B 215 TRP B 252 ARG B 256 HIS B 263 SITE 4 AC3 13 BNG B 450
CRYST1 133.400 133.400 92.600 90.00 90.00 90.00 P 42 21 2 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.007496 0.000000 0.000000 0.00000
SCALE2 0.000000 0.007496 0.000000 0.00000
SCALE3 0.000000 0.000000 0.010799 0.00000