10 20 30 40 50 60 70 80 1LOX - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER OXIDOREDUCTASE 06-OCT-97 1LOX
TITLE RABBIT RETICULOCYTE 15-LIPOXYGENASE
COMPND MOL_ID: 1; COMPND 2 MOLECULE: 15-LIPOXYGENASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: 15LOX; COMPND 5 EC: 1.13.11.33; COMPND 6 OTHER_DETAILS: 15LOX IS BOUND TO A COMPETITIVE INHIBITOR WHICH HAS COMPND 7 THE RESIDUE NUMBER 841
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ORYCTOLAGUS CUNICULUS; SOURCE 3 ORGANISM_COMMON: RABBIT; SOURCE 4 ORGANISM_TAXID: 9986; SOURCE 5 CELL: RETICULOCYTE; SOURCE 6 CELLULAR_LOCATION: CYTOPLASM
KEYWDS OXIDOREDUCTASE, 15LO_DEPOT2
EXPDTA X-RAY DIFFRACTION
AUTHOR S.A.GILLMOR,A.VILLASENOR,R.J.FLETTERICK,E.SIGAL,M.F.BROWNER
REVDAT 4 16-DEC-15 1LOX 1 ATOM REMARK VERSN REVDAT 3 24-FEB-09 1LOX 1 VERSN REVDAT 2 02-DEC-98 1LOX 1 COMPND REMARK HEADER JRNL REVDAT 2 2 1 KEYWDS REVDAT 1 04-NOV-98 1LOX 0
JRNL AUTH S.A.GILLMOR,A.VILLASENOR,R.FLETTERICK,E.SIGAL,M.F.BROWNER JRNL TITL THE STRUCTURE OF MAMMALIAN 15-LIPOXYGENASE REVEALS JRNL TITL 2 SIMILARITY TO THE LIPASES AND THE DETERMINANTS OF SUBSTRATE JRNL TITL 3 SPECIFICITY. JRNL REF NAT.STRUCT.BIOL. V. 4 1003 1997 JRNL REFN ISSN 1072-8368 JRNL PMID 9406550 JRNL DOI 10.1038/NSB1297-1003
REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH S.A.GILLMOR,A.VILLASENOR,R.FLETTERICK,E.SIGAL,M.F.BROWNER REMARK 1 TITL ERRATUM. THE STRUCTURE OF MAMMALIAN 15-LIPOXYGENASE REVEALS REMARK 1 TITL 2 SIMILARITY TO THE LIPASES AND THE DETERMINANTS OF SUBSTRATE REMARK 1 TITL 3 SPECIFICITY REMARK 1 REF NAT.STRUCT.BIOL. V. 5 242 1998 REMARK 1 REFN ISSN 1072-8368
REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.1 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 16.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 100000000.000 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0010 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 98.0 REMARK 3 NUMBER OF REFLECTIONS : 39132 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.247 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.010 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 8 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.51 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.00 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 4501 REMARK 3 BIN R VALUE (WORKING SET) : 0.3220 REMARK 3 BIN FREE R VALUE : 0.3410 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.00 REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.020 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5109 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 20 REMARK 3 SOLVENT ATOMS : 94 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 50.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 48.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.530 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 22.300 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.330 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 2.400 ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : 3.700 ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : 2.400 ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.700 ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PARHCSDX.PRO REMARK 3 PARAMETER FILE 2 : NULL REMARK 3 PARAMETER FILE 3 : NULL REMARK 3 TOPOLOGY FILE 1 : TOPHCSDX.PRO REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: EARLY ROUNDS OF REFINEMENT WERE DONE REMARK 3 WITH THE PROGRAM REFMAC FROM CCP4
REMARK 4 REMARK 4 1LOX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : AUG-96 REMARK 200 TEMPERATURE (KELVIN) : 93 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NI FILTER REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39151 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 25.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 200 DATA REDUNDANCY : 4.330 REMARK 200 R MERGE (I) : 0.07300 REMARK 200 R SYM (I) : 0.07300 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 9.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.49 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.7 REMARK 200 DATA REDUNDANCY IN SHELL : 4.00 REMARK 200 R MERGE FOR SHELL (I) : 0.36200 REMARK 200 R SYM FOR SHELL (I) : 0.36200 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MIR REMARK 200 SOFTWARE USED: PHASES, X-PLOR 3.1 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.44 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG PH 7.5
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 99.45000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 57.41748 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 45.36667 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 99.45000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 57.41748 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 45.36667 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 99.45000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 57.41748 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 45.36667 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 99.45000 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 57.41748 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 45.36667 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 99.45000 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 57.41748 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 45.36667 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 99.45000 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 57.41748 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 45.36667 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 114.83497 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 90.73333 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 114.83497 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 90.73333 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 114.83497 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 90.73333 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 114.83497 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 90.73333 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 114.83497 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 90.73333 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 114.83497 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 90.73333 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 177 REMARK 465 SER A 178 REMARK 465 LEU A 179 REMARK 465 ALA A 180 REMARK 465 TRP A 181 REMARK 465 GLY A 182 REMARK 465 LEU A 183 REMARK 465 ALA A 184 REMARK 465 GLU A 185 REMARK 465 LEU A 186 REMARK 465 ALA A 187 REMARK 465 CYS A 210 REMARK 465 GLY A 211 REMARK 465 GLN A 601 REMARK 465 PRO A 602
REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 21 CG CD CE NZ REMARK 470 LYS A 45 CG CD CE NZ REMARK 470 ARG A 66 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 68 CG CD CE NZ REMARK 470 GLU A 147 CG CD OE1 OE2 REMARK 470 LYS A 157 CG CD CE NZ REMARK 470 ASP A 174 CG OD1 OD2 REMARK 470 LEU A 188 CG CD1 CD2 REMARK 470 LYS A 189 CG CD CE NZ REMARK 470 SER A 191 OG REMARK 470 LEU A 192 CG CD1 CD2 REMARK 470 ASN A 193 CG OD1 ND2 REMARK 470 LYS A 199 CG CD CE NZ REMARK 470 ILE A 207 CG1 CG2 CD1 REMARK 470 TRP A 209 CB CG CD1 CD2 NE1 CE2 CE3 REMARK 470 TRP A 209 CZ2 CZ3 CH2 REMARK 470 ARG A 212 CG CD NE CZ NH1 NH2 REMARK 470 SER A 327 OG REMARK 470 GLN A 596 CG CD OE1 NE2 REMARK 470 ARG A 599 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 600 CG OD1 OD2 REMARK 470 ILE A 603 CG1 CG2 CD1
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 41 C - N - CA ANGL. DEV. = 10.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 41 118.79 -36.21 REMARK 500 PHE A 70 -93.18 -78.52 REMARK 500 ASP A 74 99.36 39.43 REMARK 500 ALA A 89 36.49 -84.06 REMARK 500 CYS A 97 -64.39 -129.58 REMARK 500 ILE A 207 -75.06 -45.62 REMARK 500 PHE A 208 -35.86 -178.64 REMARK 500 PHE A 279 41.90 -101.85 REMARK 500 ALA A 299 70.00 -114.89 REMARK 500 ILE A 506 -77.35 -84.86 REMARK 500 GLN A 509 76.13 54.32 REMARK 500 THR A 538 -77.11 -131.50 REMARK 500 ALA A 558 70.82 -156.52 REMARK 500 REMARK 500 REMARK: NULL
REMARK 600 REMARK 600 HETEROGEN REMARK 600 CARBOXY TERMINUS IS ONE OF THE LIGANDS TO THE CATALYTIC FE.
REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE2 A 840 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 361 NE2 REMARK 620 2 HIS A 366 NE2 89.6 REMARK 620 3 HIS A 541 NE2 91.7 88.2 REMARK 620 4 HIS A 545 ND1 84.8 170.8 84.6 REMARK 620 5 ILE A 663 OXT 170.6 90.9 78.9 93.4 REMARK 620 N 1 2 3 4
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: NUL REMARK 800 EVIDENCE_CODE: UNKNOWN REMARK 800 SITE_DESCRIPTION: CATALYTIC IRON AND ITS LIGANDS. REMARK 800 REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FE2 A 840 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE RS7 A 841
DBREF 1LOX A 2 663 UNP P12530 LOX15_RABIT 1 662
SEQADV 1LOX LYS A 585 UNP P12530 HIS 584 CONFLICT
SEQRES 1 A 662 GLY VAL TYR ARG VAL CYS VAL SER THR GLY ALA SER ILE SEQRES 2 A 662 TYR ALA GLY SER LYS ASN LYS VAL GLU LEU TRP LEU VAL SEQRES 3 A 662 GLY GLN HIS GLY GLU VAL GLU LEU GLY SER CYS LEU ARG SEQRES 4 A 662 PRO THR ARG ASN LYS GLU GLU GLU PHE LYS VAL ASN VAL SEQRES 5 A 662 SER LYS TYR LEU GLY SER LEU LEU PHE VAL ARG LEU ARG SEQRES 6 A 662 LYS LYS HIS PHE LEU LYS GLU ASP ALA TRP PHE CYS ASN SEQRES 7 A 662 TRP ILE SER VAL GLN ALA LEU GLY ALA ALA GLU ASP LYS SEQRES 8 A 662 TYR TRP PHE PRO CYS TYR ARG TRP VAL VAL GLY ASP GLY SEQRES 9 A 662 VAL GLN SER LEU PRO VAL GLY THR GLY CYS THR THR VAL SEQRES 10 A 662 GLY ASP PRO GLN GLY LEU PHE GLN LYS HIS ARG GLU GLN SEQRES 11 A 662 GLU LEU GLU GLU ARG ARG LYS LEU TYR GLN TRP GLY SER SEQRES 12 A 662 TRP LYS GLU GLY LEU ILE LEU ASN VAL ALA GLY SER LYS SEQRES 13 A 662 LEU THR ASP LEU PRO VAL ASP GLU ARG PHE LEU GLU ASP SEQRES 14 A 662 LYS LYS ILE ASP PHE GLU ALA SER LEU ALA TRP GLY LEU SEQRES 15 A 662 ALA GLU LEU ALA LEU LYS ASN SER LEU ASN ILE LEU ALA SEQRES 16 A 662 PRO TRP LYS THR LEU ASP ASP PHE ASN ARG ILE PHE TRP SEQRES 17 A 662 CYS GLY ARG SER LYS LEU ALA ARG ARG VAL ARG ASP SER SEQRES 18 A 662 TRP GLN GLU ASP SER LEU PHE GLY TYR GLN PHE LEU ASN SEQRES 19 A 662 GLY ALA ASN PRO MET LEU LEU ARG ARG SER VAL GLN LEU SEQRES 20 A 662 PRO ALA ARG LEU VAL PHE PRO PRO GLY MET GLU GLU LEU SEQRES 21 A 662 GLN ALA GLN LEU GLU LYS GLU LEU LYS ALA GLY THR LEU SEQRES 22 A 662 PHE GLU ALA ASP PHE ALA LEU LEU ASP ASN ILE LYS ALA SEQRES 23 A 662 ASN VAL ILE LEU TYR CYS GLN GLN TYR LEU ALA ALA PRO SEQRES 24 A 662 LEU VAL MET LEU LYS LEU GLN PRO ASP GLY LYS LEU MET SEQRES 25 A 662 PRO MET VAL ILE GLN LEU HIS LEU PRO LYS ILE GLY SER SEQRES 26 A 662 SER PRO PRO PRO LEU PHE LEU PRO THR ASP PRO PRO MET SEQRES 27 A 662 VAL TRP LEU LEU ALA LYS CYS TRP VAL ARG SER SER ASP SEQRES 28 A 662 PHE GLN VAL HIS GLU LEU ASN SER HIS LEU LEU ARG GLY SEQRES 29 A 662 HIS LEU MET ALA GLU VAL PHE THR VAL ALA THR MET ARG SEQRES 30 A 662 CYS LEU PRO SER ILE HIS PRO VAL PHE LYS LEU ILE VAL SEQRES 31 A 662 PRO HIS LEU ARG TYR THR LEU GLU ILE ASN VAL ARG ALA SEQRES 32 A 662 ARG ASN GLY LEU VAL SER ASP PHE GLY ILE PHE ASP GLN SEQRES 33 A 662 ILE MET SER THR GLY GLY GLY GLY HIS VAL GLN LEU LEU SEQRES 34 A 662 GLN GLN ALA GLY ALA PHE LEU THR TYR ARG SER PHE CYS SEQRES 35 A 662 PRO PRO ASP ASP LEU ALA ASP ARG GLY LEU LEU GLY VAL SEQRES 36 A 662 GLU SER SER PHE TYR ALA GLN ASP ALA LEU ARG LEU TRP SEQRES 37 A 662 GLU ILE ILE SER ARG TYR VAL GLN GLY ILE MET GLY LEU SEQRES 38 A 662 TYR TYR LYS THR ASP GLU ALA VAL ARG ASP ASP LEU GLU SEQRES 39 A 662 LEU GLN SER TRP CYS ARG GLU ILE THR GLU ILE GLY LEU SEQRES 40 A 662 GLN GLY ALA GLN LYS GLN GLY PHE PRO THR SER LEU GLN SEQRES 41 A 662 SER VAL ALA GLN ALA CYS HIS PHE VAL THR MET CYS ILE SEQRES 42 A 662 PHE THR CYS THR GLY GLN HIS SER SER ILE HIS LEU GLY SEQRES 43 A 662 GLN LEU ASP TRP PHE THR TRP VAL PRO ASN ALA PRO CYS SEQRES 44 A 662 THR MET ARG LEU PRO PRO PRO THR THR LYS ASP ALA THR SEQRES 45 A 662 LEU GLU THR VAL MET ALA THR LEU PRO ASN LEU LYS GLN SEQRES 46 A 662 SER SER LEU GLN MET SER ILE VAL TRP GLN LEU GLY ARG SEQRES 47 A 662 ASP GLN PRO ILE MET VAL PRO LEU GLY GLN HIS GLN GLU SEQRES 48 A 662 GLU TYR PHE SER GLY PRO GLU PRO ARG ALA VAL LEU GLU SEQRES 49 A 662 LYS PHE ARG GLU GLU LEU ALA ILE MET ASP LYS GLU ILE SEQRES 50 A 662 GLU VAL ARG ASN GLU LYS LEU ASP ILE PRO TYR GLU TYR SEQRES 51 A 662 LEU ARG PRO SER ILE VAL GLU ASN SER VAL ALA ILE
HET FE2 A 840 1 HET RS7 A 841 19
HETNAM FE2 FE (II) ION HETNAM RS7 (2E)-3-(2-OCT-1-YN-1-YLPHENYL)ACRYLIC ACID
FORMUL 2 FE2 FE 2+ FORMUL 3 RS7 C17 H20 O2 FORMUL 4 HOH *94(H2 O)
HELIX 1 1 GLN A 126 LEU A 139 1 14 HELIX 2 2 LEU A 158 ASP A 160 5 3 HELIX 3 3 VAL A 163 GLU A 165 5 3 HELIX 4 4 GLU A 169 PHE A 175 1 7 HELIX 5 6 LEU A 201 ARG A 206 5 6 HELIX 6 7 LYS A 214 SER A 222 1 9 HELIX 7 8 ASP A 226 ASN A 235 1 10 HELIX 8 9 GLU A 259 LYS A 270 1 12 HELIX 9 10 ALA A 280 LEU A 282 5 3 HELIX 10 11 PRO A 338 LEU A 358 1 21 HELIX 11 12 HIS A 366 CYS A 379 1 14 HELIX 12 13 PRO A 385 LEU A 394 1 10 HELIX 13 14 THR A 397 ASN A 406 1 10 HELIX 14 15 ILE A 414 ILE A 418 1 5 HELIX 15 16 GLY A 425 PHE A 436 1 12 HELIX 16 17 ARG A 440 PHE A 442 5 3 HELIX 17 18 PRO A 444 ASP A 450 1 7 HELIX 18 19 PHE A 460 LEU A 482 1 23 HELIX 19 20 ASP A 487 ARG A 491 1 5 HELIX 20 21 LEU A 494 THR A 504 1 11 HELIX 21 22 ALA A 511 GLN A 514 5 4 HELIX 22 23 VAL A 523 THR A 536 1 14 HELIX 23 24 GLY A 539 TRP A 551 1 13 HELIX 24 25 VAL A 555 ASN A 557 5 3 HELIX 25 26 LEU A 574 THR A 580 1 7 HELIX 26 27 LEU A 584 GLN A 596 1 13 HELIX 27 28 PRO A 618 LYS A 644 1 27
SHEET 1 A 4 GLU A 46 ASN A 52 0 SHEET 2 A 4 VAL A 3 THR A 10 -1 N VAL A 8 O GLU A 47 SHEET 3 A 4 TRP A 76 ALA A 85 -1 N GLN A 84 O ARG A 5 SHEET 4 A 4 ARG A 99 VAL A 101 -1 N VAL A 101 O TRP A 76 SHEET 1 B 4 GLU A 32 GLU A 34 0 SHEET 2 B 4 LYS A 21 GLY A 28 -1 N LEU A 26 O VAL A 33 SHEET 3 B 4 LEU A 60 LYS A 68 -1 N LYS A 68 O LYS A 21 SHEET 4 B 4 VAL A 106 PRO A 110 -1 N LEU A 109 O VAL A 63 SHEET 1 C 2 TRP A 80 VAL A 83 0 SHEET 2 C 2 TYR A 93 PRO A 96 -1 N PHE A 95 O ILE A 81 SHEET 1 D 4 LEU A 274 ASP A 278 0 SHEET 2 D 4 LEU A 301 LEU A 306 -1 N LEU A 304 O PHE A 275 SHEET 3 D 4 LEU A 312 GLN A 318 -1 N GLN A 318 O LEU A 301 SHEET 4 D 4 LEU A 331 LEU A 333 -1 N PHE A 332 O ILE A 317 SHEET 1 E 2 LYS A 21 LEU A 24 0 SHEET 2 E 2 GLY A 36 ARG A 40 -1 N LEU A 39 O VAL A 22
LINK FE FE2 A 840 NE2 HIS A 361 1555 1555 2.08 LINK FE FE2 A 840 NE2 HIS A 366 1555 1555 2.17 LINK FE FE2 A 840 NE2 HIS A 541 1555 1555 2.22 LINK FE FE2 A 840 ND1 HIS A 545 1555 1555 2.28 LINK FE FE2 A 840 OXT ILE A 663 1555 1555 2.30
SITE 1 NUL 6 HIS A 361 HIS A 366 HIS A 541 HIS A 545 SITE 2 NUL 6 FE2 A 840 ILE A 663 SITE 1 AC1 5 HIS A 361 HIS A 366 HIS A 541 HIS A 545 SITE 2 AC1 5 ILE A 663 SITE 1 AC2 13 PHE A 353 GLU A 357 HIS A 361 LEU A 362 SITE 2 AC2 13 HIS A 366 ALA A 404 LEU A 408 HIS A 545 SITE 3 AC2 13 GLN A 548 ILE A 593 VAL A 594 LEU A 597 SITE 4 AC2 13 ILE A 663
CRYST1 198.900 198.900 136.100 90.00 90.00 120.00 H 3 2 18
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.005028 0.002903 0.000000 0.00000
SCALE2 0.000000 0.005805 0.000000 0.00000
SCALE3 0.000000 0.000000 0.007348 0.00000