10 20 30 40 50 60 70 80 1LED - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER LECTIN 17-DEC-92 1LED
TITLE STRUCTURES OF THE LECTIN IV OF GRIFFONIA SIMPLICIFOLIA AND ITS COMPLEX TITLE 2 WITH THE LEWIS B HUMAN BLOOD GROUP DETERMINANT AT 2.0 ANGSTROMS TITLE 3 RESOLUTION
COMPND MOL_ID: 1; COMPND 2 MOLECULE: WEST-CENTRAL AFRICAN LEGUME LECTIN IV; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GRIFFONIA SIMPLICIFOLIA; SOURCE 3 ORGANISM_TAXID: 3850
KEYWDS LECTIN
EXPDTA X-RAY DIFFRACTION
AUTHOR L.DELBAERE,M.VANDONSELAAR,J.QUAIL
REVDAT 5 13-JUL-11 1LED 1 VERSN REVDAT 4 25-AUG-09 1LED 1 SOURCE REVDAT 3 24-FEB-09 1LED 1 VERSN REVDAT 2 01-APR-03 1LED 1 JRNL REVDAT 1 31-JAN-94 1LED 0
JRNL AUTH L.T.DELBAERE,M.VANDONSELAAR,L.PRASAD,J.W.QUAIL,K.S.WILSON, JRNL AUTH 2 Z.DAUTER JRNL TITL STRUCTURES OF THE LECTIN IV OF GRIFFONIA SIMPLICIFOLIA AND JRNL TITL 2 ITS COMPLEX WITH THE LEWIS B HUMAN BLOOD GROUP DETERMINANT JRNL TITL 3 AT 2.0 A RESOLUTION. JRNL REF J.MOL.BIOL. V. 230 950 1993 JRNL REFN ISSN 0022-2836 JRNL PMID 8478943 JRNL DOI 10.1006/JMBI.1993.1212
REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH L.T.J.DELBAERE,M.VANDONSELAAR,L.PRASAD,J.W.QUAIL, REMARK 1 AUTH 2 J.R.PEARLSTONE,M.R.CARPENTER,L.B.SMILLIE,P.V.NIKRAD,U.SPOHR, REMARK 1 AUTH 3 R.U.LEMIEUX REMARK 1 TITL MOLECULAR RECOGNITION OF A HUMAN BLOOD GROUP DETERMINANT BY REMARK 1 TITL 2 A PLANT LECTIN REMARK 1 REF CAN.J.CHEM. V. 68 1116 1990 REMARK 1 REFN ISSN 0008-4042 REMARK 1 REFERENCE 2 REMARK 1 AUTH L.T.J.DELBAERE,M.VANDONSELAAR,L.PRASAD,J.W.QUAIL,P.V.NIKRAD, REMARK 1 AUTH 2 J.R.PEARLSTONE,M.R.CARPENTER,L.B.SMILLIE,U.SPOHR,R.U.LEMIEUX REMARK 1 TITL STRUCTURES OF GRIFFONIA SIMPLICIFOLIA LECTIN IV AND ITS REMARK 1 TITL 2 COMPLEX WITH A SYNTHETIC LEWIS B BLOOD GROUP DETERMINANT REMARK 1 REF TRANS.AM.CRYSTALLOGR.ASSOC. V. 25 65 1991 REMARK 1 REFN ISSN 0065-8006
REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PROLSQ, X-PLOR REMARK 3 AUTHORS : KONNERT,HENDRICKSON,BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : NULL REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 19212 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : 0.181 REMARK 3 R VALUE (WORKING SET) : NULL REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 FIT/AGREEMENT OF MODEL WITH ALL DATA. REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : NULL REMARK 3 FREE R VALUE (NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1904 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 92 REMARK 3 SOLVENT ATOMS : 144 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : 0.016 ; NULL REMARK 3 ANGLE DISTANCE (A) : 3.020 ; NULL REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : NULL ; NULL REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : NULL ; NULL REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : NULL ; NULL REMARK 3 MULTIPLE TORSION (A) : NULL ; NULL REMARK 3 H-BOND (X...Y) (A) : NULL ; NULL REMARK 3 H-BOND (X-H...Y) (A) : NULL ; NULL REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : NULL ; NULL REMARK 3 STAGGERED (DEGREES) : NULL ; NULL REMARK 3 TRANSVERSE (DEGREES) : NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 RESIDUES 1 AND 241 - 243 HAVE VERY HIGH TEMPERATURE FACTORS REMARK 3 AND ARE NOT WELL DETERMINED.
REMARK 4 REMARK 4 1LED COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: X-PLOR REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.41 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.58 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 42 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 39.45000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 39.45000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 44.55000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 39.45000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 39.45000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 44.55000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 39.45000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 39.45000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 44.55000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 39.45000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 39.45000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 44.55000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000
REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 403 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 404 LIES ON A SPECIAL POSITION.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 HIS A 201 NE2 HIS A 201 CD2 -0.076 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 TRP A 12 CD1 - CG - CD2 ANGL. DEV. = 5.7 DEGREES REMARK 500 TRP A 12 CB - CG - CD1 ANGL. DEV. = -8.0 DEGREES REMARK 500 TRP A 12 CE2 - CD2 - CG ANGL. DEV. = -5.7 DEGREES REMARK 500 TRP A 12 CG - CD2 - CE3 ANGL. DEV. = 5.7 DEGREES REMARK 500 ARG A 48 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 TRP A 63 CD1 - CG - CD2 ANGL. DEV. = 5.0 DEGREES REMARK 500 TRP A 63 CE2 - CD2 - CG ANGL. DEV. = -5.2 DEGREES REMARK 500 TYR A 73 CB - CG - CD2 ANGL. DEV. = -5.4 DEGREES REMARK 500 TRP A 133 CD1 - CG - CD2 ANGL. DEV. = 7.5 DEGREES REMARK 500 TRP A 133 CG - CD1 - NE1 ANGL. DEV. = -6.1 DEGREES REMARK 500 TRP A 133 CE2 - CD2 - CG ANGL. DEV. = -6.0 DEGREES REMARK 500 TRP A 138 CD1 - CG - CD2 ANGL. DEV. = 6.1 DEGREES REMARK 500 TRP A 138 CE2 - CD2 - CG ANGL. DEV. = -6.0 DEGREES REMARK 500 TYR A 143 CB - CG - CD2 ANGL. DEV. = -4.7 DEGREES REMARK 500 TRP A 161 CD1 - CG - CD2 ANGL. DEV. = 5.1 DEGREES REMARK 500 TRP A 161 CE2 - CD2 - CG ANGL. DEV. = -4.9 DEGREES REMARK 500 ARG A 195 NE - CZ - NH1 ANGL. DEV. = 4.0 DEGREES REMARK 500 TYR A 197 CB - CG - CD1 ANGL. DEV. = -4.3 DEGREES REMARK 500 ARG A 214 NE - CZ - NH1 ANGL. DEV. = 4.9 DEGREES REMARK 500 ARG A 214 NE - CZ - NH2 ANGL. DEV. = -5.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 83 41.59 -108.07 REMARK 500 LYS A 103 -137.11 -111.85 REMARK 500 PRO A 142 40.81 -77.52 REMARK 500 ASN A 151 18.84 57.60 REMARK 500 ASP A 239 126.26 -35.28 REMARK 500 ASN A 242 -5.71 72.39 REMARK 500 REMARK 500 REMARK: NULL
REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 405 DISTANCE = 5.72 ANGSTROMS
REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 250 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 145 NE2 REMARK 620 2 ASP A 131 OD2 83.0 REMARK 620 3 ASP A 140 OD1 91.2 94.3 REMARK 620 4 HOH A 305 O 95.1 177.6 84.2 REMARK 620 5 HOH A 332 O 175.5 94.7 85.1 87.0 REMARK 620 6 GLU A 129 OE2 95.8 93.8 169.9 87.8 88.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 251 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 329 O REMARK 620 2 ASP A 131 OD2 111.0 REMARK 620 3 TRP A 133 O 96.0 108.3 REMARK 620 4 ASN A 135 OD1 80.6 162.9 82.1 REMARK 620 5 ASP A 140 OD2 167.6 79.8 74.4 90.4 REMARK 620 6 ASP A 131 OD1 74.6 49.7 79.9 147.4 110.4 REMARK 620 7 HOH A 333 O 88.7 73.8 173.7 94.5 100.4 105.6 REMARK 620 N 1 2 3 4 5 6
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: CHO REMARK 800 EVIDENCE_CODE: UNKNOWN REMARK 800 SITE_DESCRIPTION: NULL REMARK 800 REMARK 800 SITE_IDENTIFIER: MN REMARK 800 EVIDENCE_CODE: UNKNOWN REMARK 800 SITE_DESCRIPTION: NULL REMARK 800 REMARK 800 SITE_IDENTIFIER: CA REMARK 800 EVIDENCE_CODE: UNKNOWN REMARK 800 SITE_DESCRIPTION: NULL REMARK 800 REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FUC A 252 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GAL A 253 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MAG A 255 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FUC A 254 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAG A 256 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAG A 257 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FUC A 262 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 250 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 251 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 500
DBREF 1LED A 2 243 UNP P24146 LEC4_GRISI 2 243
SEQRES 1 A 243 PCA ASN THR VAL ASN PHE THR TYR PRO ASP PHE TRP SER SEQRES 2 A 243 TYR SER LEU LYS ASN GLY THR GLU ILE THR PHE LEU GLY SEQRES 3 A 243 ASP ALA THR ARG ILE PRO GLY ALA LEU GLN LEU THR LYS SEQRES 4 A 243 THR ASP ALA ASN GLY ASN PRO VAL ARG SER SER ALA GLY SEQRES 5 A 243 GLN ALA SER TYR SER GLU PRO VAL PHE LEU TRP ASP SER SEQRES 6 A 243 THR GLY LYS ALA ALA SER PHE TYR THR SER PHE THR PHE SEQRES 7 A 243 LEU LEU LYS ASN TYR GLY ALA PRO THR ALA ASP GLY LEU SEQRES 8 A 243 ALA PHE PHE LEU ALA PRO VAL ASP SER SER VAL LYS ASP SEQRES 9 A 243 TYR GLY GLY PHE LEU GLY LEU PHE ARG HIS GLU THR ALA SEQRES 10 A 243 ALA ASP PRO SER LYS ASN GLN VAL VAL ALA VAL GLU PHE SEQRES 11 A 243 ASP THR TRP ILE ASN LYS ASP TRP ASN ASP PRO PRO TYR SEQRES 12 A 243 PRO HIS ILE GLY ILE ASP VAL ASN SER ILE VAL SER VAL SEQRES 13 A 243 ALA THR THR ARG TRP GLU ASN ASP ASP ALA TYR GLY SER SEQRES 14 A 243 SER ILE ALA THR ALA HIS ILE THR TYR ASP ALA ARG SER SEQRES 15 A 243 LYS ILE LEU THR VAL LEU LEU SER TYR GLU HIS GLY ARG SEQRES 16 A 243 ASP TYR ILE LEU SER HIS VAL VAL ASP LEU ALA LYS VAL SEQRES 17 A 243 LEU PRO GLN LYS VAL ARG ILE GLY PHE SER ALA GLY VAL SEQRES 18 A 243 GLY TYR ASP GLU VAL THR TYR ILE LEU SER TRP HIS PHE SEQRES 19 A 243 PHE SER THR LEU ASP GLY THR ASN LYS
MODRES 1LED ASN A 18 ASN GLYCOSYLATION SITE MODRES 1LED PCA A 1 GLU PYROGLUTAMIC ACID
HET PCA A 1 8 HET FUC A 252 10 HET GAL A 253 11 HET MAG A 255 16 HET FUC A 254 10 HET NAG A 256 14 HET NAG A 257 14 HET FUC A 262 10 HET MN A 250 1 HET CA A 251 1 HET SO4 A 500 5
HETNAM PCA PYROGLUTAMIC ACID HETNAM FUC ALPHA-L-FUCOSE HETNAM GAL BETA-D-GALACTOSE HETNAM MAG BETA-METHYL-N-ACETYL-D-GLUCOSAMINE HETNAM NAG N-ACETYL-D-GLUCOSAMINE HETNAM MN MANGANESE (II) ION HETNAM CA CALCIUM ION HETNAM SO4 SULFATE ION
FORMUL 1 PCA C5 H7 N O3 FORMUL 2 FUC 3(C6 H12 O5) FORMUL 2 GAL C6 H12 O6 FORMUL 2 MAG C9 H17 N O6 FORMUL 3 NAG 2(C8 H15 N O6) FORMUL 4 MN MN 2+ FORMUL 5 CA CA 2+ FORMUL 6 SO4 O4 S 2- FORMUL 7 HOH *144(H2 O)
HELIX 1 H1 GLU A 162 TYR A 167 1 6 HELIX 2 H2 LEU A 205 LEU A 209 1 5
SHEET 1 B1 6 VAL A 4 TYR A 8 0 SHEET 2 B1 6 TRP A 232 THR A 237 -1 N TRP A 232 O TYR A 8 SHEET 3 B1 6 SER A 71 PHE A 78 -1 N SER A 71 O THR A 237 SHEET 4 B1 6 ALA A 172 ASP A 179 -1 N ALA A 172 O PHE A 78 SHEET 5 B1 6 LYS A 183 TYR A 191 -1 N ILE A 184 O ASP A 179 SHEET 6 B1 6 ARG A 195 VAL A 203 -1 O ARG A 195 N TYR A 191 SHEET 1 B2 7 THR A 23 LEU A 25 0 SHEET 2 B2 7 SER A 50 TYR A 56 -1 N GLN A 53 O LEU A 25 SHEET 3 B2 7 ARG A 214 VAL A 221 -1 O ILE A 215 N TYR A 56 SHEET 4 B2 7 GLY A 90 ALA A 96 -1 O GLY A 90 N ARG A 214 SHEET 5 B2 7 VAL A 125 ASP A 131 -1 N VAL A 126 O LEU A 95 SHEET 6 B2 7 HIS A 145 ASN A 151 -1 N HIS A 145 O ASP A 131 SHEET 7 B2 7 ALA A 157 THR A 159 -1 N ALA A 157 O ILE A 148 SHEET 1 B3 4 THR A 29 ILE A 31 0 SHEET 2 B3 4 ALA A 34 LEU A 37 -1 N ALA A 34 O ILE A 31 SHEET 3 B3 4 ASP A 224 ILE A 229 -1 O THR A 227 N LEU A 37 SHEET 4 B3 4 LEU A 79 TYR A 83 -1 N LEU A 79 O TYR A 228
LINK ND2 ASN A 18 C1 NAG A 257 1555 1555 1.44 LINK C1 FUC A 252 O2 GAL A 253 1555 1555 1.41 LINK C1 GAL A 253 O3 MAG A 255 1555 1555 1.43 LINK O4 MAG A 255 C1 FUC A 254 1555 1555 1.46 LINK C1 NAG A 256 O4 NAG A 257 1555 1555 1.42 LINK O3 NAG A 257 C1 FUC A 262 1555 1555 1.43 LINK C PCA A 1 N ASN A 2 1555 1555 1.35 LINK MN MN A 250 NE2 HIS A 145 1555 1555 2.22 LINK MN MN A 250 OD2 ASP A 131 1555 1555 2.05 LINK MN MN A 250 OD1 ASP A 140 1555 1555 2.38 LINK MN MN A 250 O HOH A 305 1555 1555 2.06 LINK MN MN A 250 O HOH A 332 1555 1555 2.18 LINK MN MN A 250 OE2 GLU A 129 1555 1555 2.24 LINK CA CA A 251 O HOH A 329 1555 1555 2.21 LINK CA CA A 251 OD2 ASP A 131 1555 1555 2.66 LINK CA CA A 251 O TRP A 133 1555 1555 2.30 LINK CA CA A 251 OD1 ASN A 135 1555 1555 2.47 LINK CA CA A 251 OD2 ASP A 140 1555 1555 2.29 LINK CA CA A 251 OD1 ASP A 131 1555 1555 2.40 LINK CA CA A 251 O HOH A 333 1555 1555 2.55
CISPEP 1 ALA A 85 PRO A 86 0 -6.36 CISPEP 2 ALA A 88 ASP A 89 0 1.48 CISPEP 3 VAL A 221 GLY A 222 0 1.00
SITE 1 CHO 12 ARG A 48 SER A 49 ASP A 89 TYR A 105 SITE 2 CHO 12 GLY A 107 PHE A 108 HIS A 114 TRP A 133 SITE 3 CHO 12 ASN A 135 TRP A 138 GLY A 222 TYR A 223 SITE 1 MN 6 GLU A 129 ASP A 131 ASP A 140 HIS A 145 SITE 2 MN 6 HOH A 305 HOH A 332 SITE 1 CA 6 ASP A 131 TRP A 133 ASN A 135 ASP A 140 SITE 2 CA 6 HOH A 329 HOH A 333 SITE 1 AC1 10 PHE A 108 HIS A 114 ASN A 135 ASP A 137 SITE 2 AC1 10 TRP A 138 GAL A 253 MAG A 255 HOH A 382 SITE 3 AC1 10 HOH A 450 HOH A 454 SITE 1 AC2 10 ASP A 89 GLY A 107 TRP A 133 ASN A 135 SITE 2 AC2 10 GLY A 222 TYR A 223 FUC A 252 FUC A 254 SITE 3 AC2 10 MAG A 255 HOH A 382 SITE 1 AC3 6 FUC A 252 GAL A 253 FUC A 254 HOH A 453 SITE 2 AC3 6 HOH A 455 HOH A 458 SITE 1 AC4 9 ARG A 48 SER A 49 TYR A 105 VAL A 221 SITE 2 AC4 9 GLY A 222 GAL A 253 MAG A 255 HOH A 456 SITE 3 AC4 9 HOH A 457 SITE 1 AC5 4 LEU A 25 SER A 101 NAG A 257 FUC A 262 SITE 1 AC6 6 ASN A 18 PHE A 24 LEU A 25 NAG A 256 SITE 2 AC6 6 FUC A 262 HOH A 425 SITE 1 AC7 5 PHE A 24 LEU A 25 GLY A 26 NAG A 256 SITE 2 AC7 5 NAG A 257 SITE 1 AC8 6 GLU A 129 ASP A 131 ASP A 140 HIS A 145 SITE 2 AC8 6 HOH A 305 HOH A 332 SITE 1 AC9 6 ASP A 131 TRP A 133 ASN A 135 ASP A 140 SITE 2 AC9 6 HOH A 329 HOH A 333 SITE 1 BC1 5 TYR A 8 SER A 13 LEU A 16 GLU A 21 SITE 2 BC1 5 ARG A 30
CRYST1 78.900 78.900 89.100 90.00 90.00 90.00 P 42 21 2 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.012674 0.000000 0.000000 0.00000
SCALE2 0.000000 0.012674 0.000000 0.00000
SCALE3 0.000000 0.000000 0.011223 0.00000