10 20 30 40 50 60 70 80 1L3O - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER OXYGEN STORAGE/TRANSPORT 28-FEB-02 1L3O
TITLE SOLUTION STRUCTURE DETERMINATION OF THE FULLY OXIDIZED TITLE 2 DOUBLE MUTANT K9-10A CYTOCHROME C7 FROM DESULFUROMONAS TITLE 3 ACETOXIDANS, ENSEMBLE OF 35 STRUCTURES
COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYTOCHROME C7; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CYTOCHROME C3, CYTOCHROME C551.5; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DESULFUROMONAS ACETOXIDANS; SOURCE 3 ORGANISM_TAXID: 891; SOURCE 4 EXPRESSION_SYSTEM: DESULFOVIBRIO DESULFURICANS; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 876; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: G201
KEYWDS AUTOMATIC ASSIGNMENT, CYTOCHROME C7, ELECTRON TRANSFER, KEYWDS 2 MULTIHEME CYTOCHROMES, NMR SOLUTION STRUCTURES, OXYGEN KEYWDS 3 STORAGE/TRANSPORT COMPLEX
EXPDTA SOLUTION NMR
NUMMDL 35
AUTHOR M.ASSFALG,I.BERTINI,P.TURANO,M.BRUSCHI,M.C.DURAND, AUTHOR 2 M.T.GIUDICI-ORTICONI,A.DOLLA
REVDAT 2 24-FEB-09 1L3O 1 VERSN REVDAT 1 13-MAR-02 1L3O 0
JRNL AUTH M.ASSFALG,I.BERTINI,P.TURANO,M.BRUSCHI,M.C.DURAND, JRNL AUTH 2 M.T.GIUDICI-ORTICONI,A.DOLLA JRNL TITL A QUICK SOLUTION STRUCTURE DETERMINATION OF THE JRNL TITL 2 FULLY OXIDIZED DOUBLE MUTANT K9-10A CYTOCHROME C7 JRNL TITL 3 FROM DESULFUROMONAS ACETOXIDANS AND MECHANISTIC JRNL TITL 4 IMPLICATIONS. JRNL REF J.BIOMOL.NMR V. 22 107 2002 JRNL REFN ISSN 0925-2738 JRNL PMID 11883773 JRNL DOI 10.1023/A:1014202405862
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : AMBER 5.0 REMARK 3 AUTHORS : KOLMAN, CASE REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1L3O COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-MAR-02. REMARK 100 THE RCSB ID CODE IS RCSB015614.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 100 MM PHOSPHATE BUFFER REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 2MM CYTOCHROME C7 REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : PSEUDYANA 1.5 REMARK 210 METHOD USED : SIMULATED ANNEALING IN REMARK 210 TORSION ANGLE SPACE AND REMARK 210 RESTRAINED ENERGY MINIMIZATION REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 500 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 35 REMARK 210 CONFORMERS, SELECTION CRITERIA : THE SUBMITTED CONFORMER REMARK 210 MODELS ARE THE 35 STRUCTURES REMARK 210 WITH THE LOWEST TARGET REMARK 210 FUNCTION VALUES REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 21 PHE A 15 CB - CG - CD2 ANGL. DEV. = -4.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 THR A 5 103.75 63.89 REMARK 500 1 THR A 14 78.92 55.04 REMARK 500 1 CYS A 26 -56.24 66.13 REMARK 500 1 GLU A 31 79.95 -66.51 REMARK 500 1 LYS A 41 24.20 -76.54 REMARK 500 1 LYS A 42 -54.39 -122.83 REMARK 500 1 ASP A 47 -52.31 -143.52 REMARK 500 1 CYS A 49 -58.74 70.20 REMARK 500 1 THR A 60 -35.45 -140.33 REMARK 500 2 ASP A 2 99.27 -18.97 REMARK 500 2 VAL A 3 85.40 47.96 REMARK 500 2 THR A 5 133.11 65.83 REMARK 500 2 ALA A 10 41.18 -94.64 REMARK 500 2 PHE A 15 90.37 -68.05 REMARK 500 2 LEU A 24 -89.33 -103.25 REMARK 500 2 ASP A 27 -63.25 -20.02 REMARK 500 2 ALA A 28 -31.75 -38.79 REMARK 500 2 THR A 33 76.44 50.81 REMARK 500 2 SER A 43 -59.98 -126.40 REMARK 500 2 ASP A 47 -50.46 -152.68 REMARK 500 3 ASP A 2 -154.17 -125.58 REMARK 500 3 VAL A 3 91.79 -61.59 REMARK 500 3 THR A 14 104.13 65.67 REMARK 500 3 LYS A 18 -70.08 -59.78 REMARK 500 3 LEU A 24 -65.70 -101.52 REMARK 500 3 ALA A 28 -33.64 -35.89 REMARK 500 3 THR A 33 79.02 8.23 REMARK 500 3 LYS A 36 175.62 173.28 REMARK 500 3 ASP A 47 -62.43 -148.02 REMARK 500 3 CYS A 49 -68.57 64.85 REMARK 500 3 HIS A 53 35.12 -63.98 REMARK 500 3 LYS A 61 152.87 -49.35 REMARK 500 3 CYS A 65 -66.79 -107.04 REMARK 500 4 ASP A 2 99.74 -36.53 REMARK 500 4 VAL A 3 115.69 62.33 REMARK 500 4 ASN A 8 -75.98 -71.12 REMARK 500 4 ALA A 9 -44.95 -173.89 REMARK 500 4 THR A 14 87.62 55.74 REMARK 500 4 LYS A 18 -70.57 -59.35 REMARK 500 4 CYS A 26 -54.69 65.18 REMARK 500 4 GLU A 31 81.62 -62.21 REMARK 500 4 LYS A 46 -61.96 -101.47 REMARK 500 4 ASP A 47 -59.65 -137.75 REMARK 500 4 CYS A 49 -61.32 70.74 REMARK 500 4 SER A 55 43.90 -77.87 REMARK 500 4 CYS A 65 -62.04 -108.74 REMARK 500 5 THR A 14 88.90 63.51 REMARK 500 5 LEU A 24 -94.79 -94.26 REMARK 500 5 ASP A 27 -66.22 -17.96 REMARK 500 5 ALA A 28 -29.55 -37.03 REMARK 500 5 THR A 33 76.18 50.48 REMARK 500 5 ALA A 38 90.78 55.12 REMARK 500 5 LYS A 41 20.30 -53.65 REMARK 500 5 LYS A 42 -71.20 -128.29 REMARK 500 5 LYS A 46 -88.08 -78.27 REMARK 500 5 CYS A 49 -60.14 72.10 REMARK 500 5 ASN A 56 -9.93 65.01 REMARK 500 5 ASN A 57 80.55 -150.70 REMARK 500 5 THR A 60 -36.66 61.73 REMARK 500 5 LYS A 61 155.79 -45.14 REMARK 500 5 CYS A 65 -60.59 -125.02 REMARK 500 6 ASP A 2 94.59 65.68 REMARK 500 6 VAL A 3 75.30 50.77 REMARK 500 6 ASN A 8 -85.69 -94.60 REMARK 500 6 ALA A 9 -45.70 -178.26 REMARK 500 6 THR A 14 94.43 64.09 REMARK 500 6 LYS A 18 -70.49 -70.18 REMARK 500 6 LEU A 24 -79.38 -85.65 REMARK 500 6 THR A 33 101.94 69.80 REMARK 500 6 ASP A 40 -179.68 -174.73 REMARK 500 6 LYS A 41 57.62 -64.89 REMARK 500 6 LYS A 42 -50.90 -168.53 REMARK 500 6 ASP A 47 -55.34 -146.64 REMARK 500 6 CYS A 49 -66.02 64.62 REMARK 500 6 HIS A 53 -4.48 -57.39 REMARK 500 6 SER A 55 40.17 -81.33 REMARK 500 6 CYS A 65 -71.89 -104.81 REMARK 500 7 THR A 14 95.90 62.86 REMARK 500 7 CYS A 26 -55.79 65.54 REMARK 500 7 GLU A 31 75.29 -67.15 REMARK 500 7 LYS A 41 50.69 -69.59 REMARK 500 7 LYS A 42 -48.84 -151.14 REMARK 500 7 HIS A 45 39.47 -74.41 REMARK 500 7 LYS A 46 -63.80 -133.31 REMARK 500 7 ASP A 47 -49.87 -131.20 REMARK 500 7 CYS A 49 -63.31 71.43 REMARK 500 7 ASN A 56 -153.65 -139.83 REMARK 500 8 THR A 14 95.90 62.86 REMARK 500 8 CYS A 26 -55.79 65.54 REMARK 500 8 GLU A 31 75.29 -67.15 REMARK 500 8 LYS A 41 50.69 -69.59 REMARK 500 8 LYS A 42 -48.84 -151.14 REMARK 500 8 HIS A 45 39.47 -74.41 REMARK 500 8 LYS A 46 -63.80 -133.31 REMARK 500 8 ASP A 47 -49.87 -131.20 REMARK 500 8 CYS A 49 -63.31 71.43 REMARK 500 8 ASN A 56 -153.65 -139.83 REMARK 500 9 ASP A 2 81.53 -167.05 REMARK 500 9 VAL A 3 73.27 52.99 REMARK 500 9 THR A 14 99.99 68.42 REMARK 500 9 CYS A 26 -57.08 64.70 REMARK 500 9 GLU A 31 83.41 -55.72 REMARK 500 9 LYS A 41 38.28 -60.66 REMARK 500 9 LYS A 42 -73.24 -136.15 REMARK 500 9 LYS A 46 -74.80 -79.16 REMARK 500 9 ASP A 47 -57.18 -135.06 REMARK 500 9 CYS A 49 -61.38 70.47 REMARK 500 9 ASN A 56 -50.26 -144.49 REMARK 500 9 ASN A 57 130.32 170.74 REMARK 500 9 THR A 60 -65.44 73.34 REMARK 500 10 ASP A 2 -64.53 -105.97 REMARK 500 10 THR A 14 94.04 62.26 REMARK 500 10 CYS A 26 -51.05 112.14 REMARK 500 10 HIS A 30 86.01 -152.14 REMARK 500 10 THR A 33 80.38 55.14 REMARK 500 10 ALA A 38 93.03 62.41 REMARK 500 10 LYS A 41 -11.93 -47.71 REMARK 500 10 LYS A 46 -66.50 -92.10 REMARK 500 10 ASP A 47 -48.21 -140.09 REMARK 500 10 CYS A 49 -61.65 69.89 REMARK 500 10 THR A 60 81.92 -154.46 REMARK 500 10 LYS A 61 31.88 -149.79 REMARK 500 10 CYS A 62 -67.78 64.61 REMARK 500 11 ASP A 2 -72.41 -21.18 REMARK 500 11 VAL A 4 -61.32 -94.50 REMARK 500 11 THR A 5 137.09 65.56 REMARK 500 11 CYS A 26 -56.34 63.09 REMARK 500 11 ALA A 28 -35.93 -39.80 REMARK 500 11 GLU A 31 78.71 -67.34 REMARK 500 11 LYS A 42 -40.16 -173.71 REMARK 500 11 SER A 43 -63.65 -95.80 REMARK 500 11 LYS A 46 -64.13 -106.62 REMARK 500 11 ASP A 47 -52.42 -135.09 REMARK 500 11 CYS A 49 -59.21 73.37 REMARK 500 11 LYS A 50 -64.68 -29.22 REMARK 500 11 HIS A 53 4.77 -67.49 REMARK 500 11 LYS A 54 -62.80 -107.42 REMARK 500 11 ASN A 56 1.03 51.60 REMARK 500 11 ASN A 57 71.86 -152.09 REMARK 500 11 CYS A 65 -56.85 -122.87 REMARK 500 12 ASP A 2 90.20 58.31 REMARK 500 12 VAL A 3 77.15 62.69 REMARK 500 12 ASN A 8 -110.94 -114.91 REMARK 500 12 ALA A 9 -34.57 -140.51 REMARK 500 12 CYS A 26 -54.82 66.81 REMARK 500 12 GLU A 31 75.78 -61.41 REMARK 500 12 LYS A 41 46.85 -74.15 REMARK 500 12 LYS A 42 -46.65 -157.91 REMARK 500 12 HIS A 45 3.13 -69.58 REMARK 500 12 LYS A 46 -74.29 -96.40 REMARK 500 12 ASP A 47 -59.70 -125.74 REMARK 500 12 CYS A 49 -61.39 72.89 REMARK 500 12 HIS A 53 36.03 -68.98 REMARK 500 12 LYS A 54 12.74 -143.04 REMARK 500 12 SER A 55 49.61 -79.05 REMARK 500 12 ASN A 56 131.93 74.49 REMARK 500 13 GLU A 7 83.42 68.14 REMARK 500 13 THR A 14 94.95 65.38 REMARK 500 13 LYS A 18 -74.31 -78.39 REMARK 500 13 LEU A 24 -94.74 -99.61 REMARK 500 13 ASP A 27 -65.11 -19.19 REMARK 500 13 ALA A 28 -35.71 -36.84 REMARK 500 13 LYS A 42 -77.97 -108.37 REMARK 500 13 ASP A 47 -58.27 -151.58 REMARK 500 13 ALA A 48 -74.13 -17.12 REMARK 500 13 HIS A 53 8.61 -56.27 REMARK 500 13 CYS A 65 -76.39 -96.41 REMARK 500 14 ASP A 2 -143.20 -82.21 REMARK 500 14 THR A 14 88.83 61.92 REMARK 500 14 CYS A 26 -54.60 66.14 REMARK 500 14 GLU A 31 81.05 -67.63 REMARK 500 14 LYS A 41 0.56 -51.35 REMARK 500 14 LYS A 42 -70.26 -101.71 REMARK 500 14 LYS A 46 -105.61 -93.90 REMARK 500 14 ASN A 56 -154.12 -91.54 REMARK 500 14 ASN A 57 52.97 -112.36 REMARK 500 14 PRO A 59 80.63 -67.99 REMARK 500 15 ASP A 2 86.06 62.15 REMARK 500 15 VAL A 3 85.15 59.89 REMARK 500 15 THR A 5 135.94 66.48 REMARK 500 15 ASN A 8 -84.99 -105.69 REMARK 500 15 ALA A 9 -46.61 -176.76 REMARK 500 15 THR A 14 76.13 -108.55 REMARK 500 15 PHE A 15 107.39 -58.97 REMARK 500 15 ASP A 16 57.63 -109.11 REMARK 500 15 CYS A 26 -59.67 62.20 REMARK 500 15 ALA A 28 -36.14 -39.88 REMARK 500 15 HIS A 30 83.35 -155.69 REMARK 500 15 THR A 33 71.49 31.68 REMARK 500 15 ALA A 38 96.83 63.93 REMARK 500 15 LYS A 41 46.23 -71.91 REMARK 500 15 LYS A 42 -67.79 -154.65 REMARK 500 15 ASP A 47 -56.00 -143.57 REMARK 500 15 CYS A 49 -58.44 71.93 REMARK 500 15 SER A 55 38.98 -75.62 REMARK 500 16 ASP A 2 -131.56 -115.28 REMARK 500 16 THR A 14 102.23 59.18 REMARK 500 16 LYS A 18 -70.07 -60.61 REMARK 500 16 CYS A 26 -62.64 62.09 REMARK 500 16 ALA A 35 -47.18 -138.54 REMARK 500 16 LYS A 36 177.71 173.05 REMARK 500 16 LYS A 41 56.57 -69.41 REMARK 500 16 LYS A 42 -55.61 -170.93 REMARK 500 16 LYS A 46 -68.91 -103.98 REMARK 500 16 ASP A 47 -54.70 -130.77 REMARK 500 16 CYS A 49 -60.57 70.57 REMARK 500 16 LYS A 50 -70.83 -30.07 REMARK 500 16 SER A 55 34.46 -79.59 REMARK 500 16 ILE A 67 106.15 -57.57 REMARK 500 17 VAL A 3 60.51 26.50 REMARK 500 17 THR A 14 105.43 70.02 REMARK 500 17 GLU A 22 -38.83 -39.74 REMARK 500 17 CYS A 26 -60.30 64.88 REMARK 500 17 LYS A 41 36.90 -75.53 REMARK 500 17 LYS A 42 -66.87 -151.47 REMARK 500 17 ASP A 47 -53.24 -136.05 REMARK 500 17 THR A 60 40.97 -73.63 REMARK 500 17 LYS A 61 141.93 -170.88 REMARK 500 18 ASP A 2 -72.04 -111.47 REMARK 500 18 ASN A 8 -74.67 -78.45 REMARK 500 18 ALA A 9 -46.96 -173.97 REMARK 500 18 THR A 14 101.56 66.70 REMARK 500 18 CYS A 26 -61.49 64.07 REMARK 500 18 LYS A 41 1.73 -55.65 REMARK 500 18 LYS A 42 -74.85 -82.92 REMARK 500 18 LYS A 46 -86.11 -118.29 REMARK 500 18 ASP A 47 -67.96 -102.05 REMARK 500 18 CYS A 49 -65.14 72.30 REMARK 500 18 THR A 60 -52.14 70.32 REMARK 500 18 CYS A 65 -78.51 -98.03 REMARK 500 19 VAL A 3 84.08 44.29 REMARK 500 19 THR A 14 108.95 65.51 REMARK 500 19 CYS A 26 -58.10 66.92 REMARK 500 19 LYS A 41 55.47 -62.01 REMARK 500 19 LYS A 42 -88.65 -157.57 REMARK 500 19 LYS A 46 -61.28 -104.09 REMARK 500 19 ASP A 47 -50.49 -150.44 REMARK 500 19 CYS A 49 -60.70 68.71 REMARK 500 19 ASN A 57 -43.35 81.07 REMARK 500 19 CYS A 62 -65.81 73.59 REMARK 500 20 VAL A 3 94.80 56.55 REMARK 500 20 ASN A 8 -85.95 -96.84 REMARK 500 20 ALA A 9 -45.05 -178.05 REMARK 500 20 PHE A 15 99.09 -68.65 REMARK 500 20 CYS A 26 -57.40 64.97 REMARK 500 20 LYS A 41 52.40 -65.89 REMARK 500 20 LYS A 42 -45.14 -167.81 REMARK 500 20 ASP A 47 -61.28 -144.18 REMARK 500 20 CYS A 49 -59.14 70.06 REMARK 500 20 HIS A 53 46.01 -69.95 REMARK 500 20 LYS A 54 -58.57 -156.20 REMARK 500 20 ASN A 57 -65.52 62.33 REMARK 500 20 THR A 60 31.02 -78.78 REMARK 500 20 CYS A 62 -58.40 68.89 REMARK 500 21 VAL A 3 94.16 -8.60 REMARK 500 21 VAL A 13 -34.74 -130.46 REMARK 500 21 THR A 14 96.55 65.32 REMARK 500 21 LYS A 18 -73.16 -77.60 REMARK 500 21 CYS A 26 -60.25 63.03 REMARK 500 21 GLU A 31 76.15 -67.66 REMARK 500 21 THR A 33 86.90 -10.21 REMARK 500 21 ALA A 38 93.36 64.35 REMARK 500 21 LYS A 41 -23.51 -34.75 REMARK 500 21 LYS A 42 -60.87 -102.97 REMARK 500 21 LYS A 46 -90.14 -95.03 REMARK 500 21 CYS A 49 -63.60 67.63 REMARK 500 21 SER A 55 24.50 -78.83 REMARK 500 21 ASN A 56 67.96 86.82 REMARK 500 22 ASP A 2 -55.14 76.71 REMARK 500 22 THR A 14 93.96 64.81 REMARK 500 22 CYS A 26 -61.53 59.98 REMARK 500 22 HIS A 30 69.03 -152.54 REMARK 500 22 ALA A 38 97.66 64.99 REMARK 500 22 LYS A 42 -76.65 -87.72 REMARK 500 22 LYS A 46 -105.84 -122.95 REMARK 500 22 ASN A 56 141.75 179.43 REMARK 500 22 ASN A 57 -52.45 -168.20 REMARK 500 22 CYS A 65 -68.90 -99.33 REMARK 500 23 ASN A 8 -80.47 -105.02 REMARK 500 23 ALA A 9 -51.69 -169.06 REMARK 500 23 ALA A 10 45.08 -84.82 REMARK 500 23 PHE A 15 85.95 -64.46 REMARK 500 23 CYS A 26 -58.33 62.60 REMARK 500 23 HIS A 30 74.89 -156.62 REMARK 500 23 THR A 33 87.46 63.64 REMARK 500 23 LYS A 41 60.58 -61.11 REMARK 500 23 LYS A 42 -83.00 -165.54 REMARK 500 23 ASP A 47 -59.60 -139.82 REMARK 500 23 CYS A 49 -57.30 74.03 REMARK 500 23 THR A 60 45.91 -107.10 REMARK 500 23 CYS A 65 -60.34 -101.52 REMARK 500 24 ASP A 2 -71.54 -170.11 REMARK 500 24 GLU A 7 68.22 70.80 REMARK 500 24 THR A 14 91.60 57.24 REMARK 500 24 CYS A 26 -59.16 66.80 REMARK 500 24 LYS A 36 96.74 -68.91 REMARK 500 24 LYS A 41 2.61 -69.77 REMARK 500 24 LYS A 42 -72.01 -88.80 REMARK 500 24 ASP A 47 -47.38 -156.53 REMARK 500 24 SER A 55 -50.07 67.53 REMARK 500 24 ASN A 56 -67.65 -144.16 REMARK 500 24 CYS A 65 -71.54 -104.85 REMARK 500 25 ASP A 2 -102.03 -105.78 REMARK 500 25 THR A 5 124.89 64.20 REMARK 500 25 THR A 14 73.02 53.67 REMARK 500 25 ASP A 16 71.86 -108.98 REMARK 500 25 LEU A 24 -71.23 -98.13 REMARK 500 25 GLU A 31 92.62 -37.44 REMARK 500 25 PRO A 34 -90.31 -69.91 REMARK 500 25 ALA A 35 176.44 58.66 REMARK 500 25 LYS A 41 52.56 -68.86 REMARK 500 25 LYS A 42 -57.10 -151.58 REMARK 500 25 ASP A 47 -52.55 -136.82 REMARK 500 25 CYS A 49 -67.24 67.34 REMARK 500 25 SER A 55 48.88 -81.25 REMARK 500 26 ASP A 2 102.84 -30.31 REMARK 500 26 VAL A 3 94.12 53.79 REMARK 500 26 THR A 14 100.14 59.02 REMARK 500 26 CYS A 26 -57.60 61.04 REMARK 500 26 ALA A 28 -35.70 -38.72 REMARK 500 26 GLU A 31 77.72 -67.51 REMARK 500 26 LYS A 41 26.67 -70.08 REMARK 500 26 LYS A 42 -63.86 -132.07 REMARK 500 26 LYS A 46 -72.09 -88.40 REMARK 500 26 CYS A 49 -62.23 70.34 REMARK 500 26 ASN A 56 50.83 83.80 REMARK 500 27 ASP A 2 -73.69 -12.14 REMARK 500 27 THR A 5 140.06 67.54 REMARK 500 27 ASN A 8 -85.78 -105.77 REMARK 500 27 ALA A 9 -46.31 -174.00 REMARK 500 27 CYS A 26 -60.58 59.29 REMARK 500 27 HIS A 30 75.00 -158.69 REMARK 500 27 GLU A 31 75.44 -69.89 REMARK 500 27 THR A 33 80.36 61.31 REMARK 500 27 LYS A 36 88.14 -66.13 REMARK 500 27 ALA A 38 116.44 -39.49 REMARK 500 27 ASP A 40 -163.72 -165.13 REMARK 500 27 LYS A 46 -72.96 -86.29 REMARK 500 27 ASP A 47 -40.91 -143.23 REMARK 500 27 ASN A 56 34.00 -93.56 REMARK 500 27 ASN A 57 -64.39 72.16 REMARK 500 27 THR A 60 -60.49 67.97 REMARK 500 27 CYS A 65 -61.87 -102.29 REMARK 500 28 ASP A 2 -164.94 67.11 REMARK 500 28 THR A 14 106.90 71.32 REMARK 500 28 LEU A 24 -88.15 -84.13 REMARK 500 28 GLU A 31 76.79 -68.58 REMARK 500 28 LYS A 41 -6.28 -54.22 REMARK 500 28 LYS A 42 -69.54 -102.68 REMARK 500 28 ASP A 47 -47.59 -155.84 REMARK 500 28 HIS A 53 39.48 -65.30 REMARK 500 28 LYS A 54 -47.25 -163.42 REMARK 500 28 ASN A 57 115.68 118.79 REMARK 500 28 THR A 60 -51.13 73.43 REMARK 500 29 ASP A 2 -54.25 -25.59 REMARK 500 29 ASN A 8 -86.32 -88.65 REMARK 500 29 ALA A 9 -45.18 177.62 REMARK 500 29 CYS A 26 -59.23 61.76 REMARK 500 29 ALA A 28 -36.18 -39.81 REMARK 500 29 THR A 33 85.59 59.27 REMARK 500 29 LYS A 46 -77.92 -92.61 REMARK 500 29 ASP A 47 -44.51 -131.59 REMARK 500 29 CYS A 49 -58.05 72.40 REMARK 500 29 LYS A 50 -70.33 -38.35 REMARK 500 29 ASN A 56 -60.86 -129.01 REMARK 500 29 ASN A 57 68.78 83.73 REMARK 500 30 ASP A 2 -63.90 -133.86 REMARK 500 30 ASN A 8 -85.39 -98.94 REMARK 500 30 ALA A 9 -46.75 -178.24 REMARK 500 30 ALA A 10 32.21 -87.41 REMARK 500 30 CYS A 26 -55.96 66.73 REMARK 500 30 GLU A 31 75.21 -68.55 REMARK 500 30 THR A 33 80.80 -1.51 REMARK 500 30 ALA A 35 -40.07 -135.23 REMARK 500 30 ASP A 40 -177.72 -174.24 REMARK 500 30 LYS A 42 -49.58 -148.28 REMARK 500 30 LYS A 46 -68.81 -102.72 REMARK 500 30 ASP A 47 -54.91 -142.64 REMARK 500 30 CYS A 49 -66.99 65.25 REMARK 500 30 LYS A 50 -71.27 -37.66 REMARK 500 30 HIS A 53 -7.69 -58.93 REMARK 500 30 SER A 55 33.84 -70.57 REMARK 500 30 ASN A 56 20.76 47.74 REMARK 500 30 THR A 60 67.32 -66.87 REMARK 500 31 ASP A 2 -127.89 -152.33 REMARK 500 31 ASN A 8 -78.96 -86.57 REMARK 500 31 ALA A 9 -49.04 -173.43 REMARK 500 31 PHE A 15 87.65 -69.15 REMARK 500 31 ASP A 16 106.55 -59.74 REMARK 500 31 CYS A 26 -58.22 65.19 REMARK 500 31 LYS A 42 -77.27 -167.07 REMARK 500 31 LYS A 46 -70.74 -77.37 REMARK 500 31 ASP A 47 -52.68 -142.96 REMARK 500 31 CYS A 49 -59.69 66.40 REMARK 500 31 HIS A 53 53.90 -69.98 REMARK 500 31 LYS A 54 -56.78 -169.56 REMARK 500 31 ASN A 56 145.81 -170.39 REMARK 500 31 ASN A 57 76.72 56.40 REMARK 500 31 ILE A 67 109.65 -54.37 REMARK 500 32 VAL A 3 109.60 -50.49 REMARK 500 32 THR A 14 110.06 72.24 REMARK 500 32 LEU A 24 -86.00 -109.58 REMARK 500 32 GLU A 31 77.09 -68.46 REMARK 500 32 LYS A 41 -2.27 -53.61 REMARK 500 32 LYS A 42 -64.71 -95.44 REMARK 500 32 LYS A 46 -91.76 -98.19 REMARK 500 32 HIS A 53 4.37 -63.24 REMARK 500 32 THR A 60 -64.68 69.76 REMARK 500 32 CYS A 65 -60.36 -102.78 REMARK 500 33 THR A 5 103.26 60.73 REMARK 500 33 ASN A 8 -85.10 -93.66 REMARK 500 33 ALA A 9 -46.17 -175.84 REMARK 500 33 THR A 14 80.62 51.29 REMARK 500 33 CYS A 26 -58.67 61.95 REMARK 500 33 ALA A 28 -34.07 -39.59 REMARK 500 33 GLU A 31 77.91 -65.91 REMARK 500 33 LYS A 41 55.95 -49.58 REMARK 500 33 LYS A 42 -47.71 -171.43 REMARK 500 33 LYS A 46 -74.79 -91.12 REMARK 500 33 ASP A 47 -50.14 -132.03 REMARK 500 33 CYS A 49 -73.05 66.23 REMARK 500 33 SER A 55 33.57 -77.60 REMARK 500 33 ASN A 56 -173.98 178.10 REMARK 500 33 THR A 60 69.84 -69.61 REMARK 500 34 ASP A 2 -128.24 -165.19 REMARK 500 34 THR A 14 100.24 66.97 REMARK 500 34 CYS A 26 -60.99 60.45 REMARK 500 34 GLU A 31 83.90 -67.83 REMARK 500 34 LYS A 36 98.43 -69.99 REMARK 500 34 LYS A 41 55.35 -68.87 REMARK 500 34 LYS A 42 -47.07 -162.55 REMARK 500 34 SER A 43 -63.54 -92.01 REMARK 500 34 LYS A 46 -83.98 -105.79 REMARK 500 34 ASP A 47 -68.29 -106.87 REMARK 500 34 CYS A 49 -68.07 66.58 REMARK 500 34 ASN A 57 -62.23 72.19 REMARK 500 34 CYS A 65 -70.87 -111.35 REMARK 500 34 ILE A 67 125.94 -38.70 REMARK 500 35 ASP A 2 158.33 63.33 REMARK 500 35 GLU A 7 75.63 -100.64 REMARK 500 35 THR A 14 100.36 64.32 REMARK 500 35 LYS A 18 -73.08 -77.74 REMARK 500 35 CYS A 26 -62.28 60.54 REMARK 500 35 HIS A 30 75.35 -155.83 REMARK 500 35 THR A 33 83.87 63.54 REMARK 500 35 ASP A 40 -174.66 -171.69 REMARK 500 35 LYS A 41 52.10 -66.35 REMARK 500 35 LYS A 42 -74.95 -147.16 REMARK 500 35 ASP A 47 -54.19 -135.28 REMARK 500 35 CYS A 49 -60.90 70.89 REMARK 500 35 HIS A 53 33.01 -64.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 PHE A 15 ASP A 16 3 149.74 REMARK 500 ASP A 16 HIS A 17 3 147.39 REMARK 500 ALA A 1 ASP A 2 9 -148.34 REMARK 500 PHE A 15 ASP A 16 16 149.66 REMARK 500 ASP A 16 HIS A 17 16 147.82 REMARK 500 ALA A 1 ASP A 2 24 -146.35 REMARK 500 ALA A 1 ASP A 2 27 137.86 REMARK 500 ALA A 1 ASP A 2 29 142.32 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 1 TYR A 6 0.10 SIDE_CHAIN REMARK 500 2 TYR A 6 0.11 SIDE_CHAIN REMARK 500 2 PHE A 15 0.09 SIDE_CHAIN REMARK 500 3 HIS A 30 0.08 SIDE_CHAIN REMARK 500 4 PHE A 15 0.20 SIDE_CHAIN REMARK 500 5 PHE A 15 0.10 SIDE_CHAIN REMARK 500 6 TYR A 6 0.07 SIDE_CHAIN REMARK 500 6 PHE A 15 0.09 SIDE_CHAIN REMARK 500 7 PHE A 15 0.10 SIDE_CHAIN REMARK 500 7 HIS A 17 0.09 SIDE_CHAIN REMARK 500 8 PHE A 15 0.10 SIDE_CHAIN REMARK 500 8 HIS A 17 0.09 SIDE_CHAIN REMARK 500 9 PHE A 15 0.09 SIDE_CHAIN REMARK 500 9 HIS A 17 0.12 SIDE_CHAIN REMARK 500 10 PHE A 15 0.11 SIDE_CHAIN REMARK 500 10 HIS A 17 0.17 SIDE_CHAIN REMARK 500 11 TYR A 6 0.22 SIDE_CHAIN REMARK 500 11 PHE A 15 0.10 SIDE_CHAIN REMARK 500 11 HIS A 17 0.10 SIDE_CHAIN REMARK 500 12 TYR A 6 0.10 SIDE_CHAIN REMARK 500 13 PHE A 15 0.07 SIDE_CHAIN REMARK 500 16 TYR A 6 0.15 SIDE_CHAIN REMARK 500 16 PHE A 15 0.08 SIDE_CHAIN REMARK 500 16 HIS A 17 0.14 SIDE_CHAIN REMARK 500 17 TYR A 6 0.14 SIDE_CHAIN REMARK 500 17 PHE A 15 0.10 SIDE_CHAIN REMARK 500 18 TYR A 6 0.07 SIDE_CHAIN REMARK 500 19 TYR A 6 0.07 SIDE_CHAIN REMARK 500 19 PHE A 15 0.11 SIDE_CHAIN REMARK 500 20 TYR A 6 0.10 SIDE_CHAIN REMARK 500 20 PHE A 15 0.07 SIDE_CHAIN REMARK 500 21 PHE A 15 0.12 SIDE_CHAIN REMARK 500 21 HIS A 17 0.12 SIDE_CHAIN REMARK 500 22 PHE A 15 0.14 SIDE_CHAIN REMARK 500 22 HIS A 17 0.13 SIDE_CHAIN REMARK 500 25 HIS A 30 0.10 SIDE_CHAIN REMARK 500 26 TYR A 6 0.08 SIDE_CHAIN REMARK 500 26 HIS A 17 0.09 SIDE_CHAIN REMARK 500 28 TYR A 6 0.13 SIDE_CHAIN REMARK 500 28 PHE A 15 0.10 SIDE_CHAIN REMARK 500 29 PHE A 15 0.12 SIDE_CHAIN REMARK 500 30 TYR A 6 0.15 SIDE_CHAIN REMARK 500 30 PHE A 15 0.09 SIDE_CHAIN REMARK 500 30 HIS A 30 0.09 SIDE_CHAIN REMARK 500 31 PHE A 15 0.13 SIDE_CHAIN REMARK 500 32 TYR A 6 0.08 SIDE_CHAIN REMARK 500 32 PHE A 15 0.07 SIDE_CHAIN REMARK 500 33 PHE A 15 0.10 SIDE_CHAIN REMARK 500 35 TYR A 6 0.06 SIDE_CHAIN REMARK 500 35 PHE A 15 0.15 SIDE_CHAIN REMARK 500 REMARK 500 REMARK: NULL
REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 1 HEC A 130 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 17 NE2 REMARK 620 2 HIS A 30 NE2 176.1 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 1 HEC A 166 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 45 NE2 REMARK 620 2 HIS A 66 NE2 175.6 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 1 HEC A 153 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 20 NE2 REMARK 620 2 HIS A 53 NE2 172.8 REMARK 620 N 1
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEC A 130 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEC A 153 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEC A 166
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1KWJ RELATED DB: PDB REMARK 900 CONTAINS THE ENERGY MINIMIZED AVERAGE NMR STRUCTURE FROM REMARK 900 THE PRESENT FAMILY OF STRUCTURES REMARK 900 RELATED ID: 1NEW RELATED DB: PDB REMARK 900 CONTAINS 18 NMR STRUCTURES OF THE FULLY OXIDIZED NATIVE REMARK 900 CYTOCHROME C7 REMARK 900 RELATED ID: 2NEW RELATED DB: PDB REMARK 900 CONTAINS 17 NMR STRUCTURES OF THE FULLY OXIDIZED NATIVE REMARK 900 CYTOCHROME C7 REMARK 900 RELATED ID: 1HH5 RELATED DB: PDB REMARK 900 CONTAINS THE X-RAY STRUCTURE OF THE NATIVE PROTEIN REMARK 900 RELATED ID: 1EHJ RELATED DB: PDB REMARK 900 CONTAINS 35 NMR STRUCTURES OF THE FULLY REDUCED NATIVE REMARK 900 PROTEIN REMARK 900 RELATED ID: 5279 RELATED DB: BMRB REMARK 900 CONTAINS THE PROTON SHIFTS FOR THE PRESENT STRUCTURE
DBREF 1L3O A 1 68 UNP P00137 CYC3_DESAC 1 68
SEQADV 1L3O ALA A 9 UNP P00137 LYS 9 ENGINEERED SEQADV 1L3O ALA A 10 UNP P00137 LYS 10 ENGINEERED
SEQRES 1 A 68 ALA ASP VAL VAL THR TYR GLU ASN ALA ALA GLY ASN VAL SEQRES 2 A 68 THR PHE ASP HIS LYS ALA HIS ALA GLU LYS LEU GLY CYS SEQRES 3 A 68 ASP ALA CYS HIS GLU GLY THR PRO ALA LYS ILE ALA ILE SEQRES 4 A 68 ASP LYS LYS SER ALA HIS LYS ASP ALA CYS LYS THR CYS SEQRES 5 A 68 HIS LYS SER ASN ASN GLY PRO THR LYS CYS GLY GLY CYS SEQRES 6 A 68 HIS ILE LYS
HET HEC A 130 75 HET HEC A 153 75 HET HEC A 166 75
HETNAM HEC HEME C
FORMUL 2 HEC 3(C34 H34 FE N4 O4)
HELIX 1 1 HIS A 20 GLY A 25 1 6 HELIX 2 2 CYS A 26 HIS A 30 5 5 HELIX 3 3 LYS A 42 ASP A 47 1 6 HELIX 4 4 CYS A 49 SER A 55 1 7 HELIX 5 5 LYS A 61 CYS A 65 5 5
LINK NE2 HIS A 17 FE HEC A 130 1555 1555 1.98 LINK NE2 HIS A 30 FE HEC A 130 1555 1555 1.99 LINK NE2 HIS A 45 FE HEC A 166 1555 1555 1.97 LINK NE2 HIS A 66 FE HEC A 166 1555 1555 1.99 LINK NE2 HIS A 20 FE HEC A 153 1555 1555 2.00 LINK NE2 HIS A 53 FE HEC A 153 1555 1555 2.02 LINK SG CYS A 26 CAB HEC A 130 1555 1555 1.81 LINK SG CYS A 29 CAC HEC A 130 1555 1555 1.82 LINK SG CYS A 49 CAB HEC A 153 1555 1555 1.82 LINK SG CYS A 52 CAC HEC A 153 1555 1555 1.81 LINK SG CYS A 62 CAB HEC A 166 1555 1555 1.81 LINK SG CYS A 65 CAC HEC A 166 1555 1555 1.82
SITE 1 AC1 12 TYR A 6 HIS A 17 ALA A 21 CYS A 26 SITE 2 AC1 12 CYS A 29 HIS A 30 PRO A 34 ALA A 35 SITE 3 AC1 12 LYS A 36 ILE A 37 ILE A 39 HEC A 153 SITE 1 AC2 10 VAL A 13 THR A 14 PHE A 15 HIS A 20 SITE 2 AC2 10 CYS A 29 CYS A 49 CYS A 52 HIS A 53 SITE 3 AC2 10 ASN A 56 HEC A 130 SITE 1 AC3 11 ASN A 8 ALA A 9 VAL A 13 ASP A 40 SITE 2 AC3 11 LYS A 41 ALA A 44 HIS A 45 THR A 60 SITE 3 AC3 11 CYS A 62 CYS A 65 HIS A 66
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000