10 20 30 40 50 60 70 80 1KUM - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER HYDROLASE 12-JAN-96 1KUM
TITLE GLUCOAMYLASE, GRANULAR STARCH-BINDING DOMAIN, NMR, TITLE 2 MINIMIZED AVERAGE STRUCTURE
COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUCOAMYLASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: BINDING DOMAIN, RESIDUES 509 - 616; COMPND 5 SYNONYM: 1,4-ALPHA-D-GLUCAN GLUCOHYDROLASE; COMPND 6 EC: 3.2.1.3; COMPND 7 ENGINEERED: YES; COMPND 8 OTHER_DETAILS: PH 5.2, 313 K
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ASPERGILLUS NIGER; SOURCE 3 ORGANISM_TAXID: 5061; SOURCE 4 STRAIN: AB4.1; SOURCE 5 GENE: A. NIGER GLAA; SOURCE 6 EXPRESSION_SYSTEM: ASPERGILLUS NIGER; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 5061; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PIGF; SOURCE 9 EXPRESSION_SYSTEM_GENE: A. NIGER GLAA
KEYWDS HYDROLASE, STARCH BINDING DOMAIN
EXPDTA SOLUTION NMR
AUTHOR K.SORIMACHI,A.J.JACKS,M.-F.LE GAL-COEFFET,G.WILLIAMSON, AUTHOR 2 D.B.ARCHER,M.P.WILLIAMSON
REVDAT 2 24-FEB-09 1KUM 1 VERSN REVDAT 1 11-JUL-96 1KUM 0
JRNL AUTH K.SORIMACHI,A.J.JACKS,M.F.LE GAL-COEFFET, JRNL AUTH 2 G.WILLIAMSON,D.B.ARCHER,M.P.WILLIAMSON JRNL TITL SOLUTION STRUCTURE OF THE GRANULAR STARCH BINDING JRNL TITL 2 DOMAIN OF GLUCOAMYLASE FROM ASPERGILLUS NIGER BY JRNL TITL 3 NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY. JRNL REF J.MOL.BIOL. V. 259 970 1996 JRNL REFN ISSN 0022-2836 JRNL PMID 8683599 JRNL DOI 10.1006/JMBI.1996.0374
REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH A.J.JACKS,K.SORIMACHI,M.F.LE GAL-COEFFET, REMARK 1 AUTH 2 G.WILLIAMSON,D.B.ARCHER,M.P.WILLIAMSON REMARK 1 TITL 1H AND 15N ASSIGNMENTS AND SECONDARY STRUCTURE OF REMARK 1 TITL 2 THE STARCH-BINDING DOMAIN OF GLUCOAMYLASE FROM REMARK 1 TITL 3 ASPERGILLUS NIGER REMARK 1 REF EUR.J.BIOCHEM. V. 233 568 1995 REMARK 1 REFN ISSN 0014-2956
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.1 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1KUM COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 313 REMARK 210 PH : 5.2 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : NULL REMARK 210 SAMPLE CONTENTS : NULL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : NULL REMARK 210 SPECTROMETER FIELD STRENGTH : NULL REMARK 210 SPECTROMETER MODEL : NULL REMARK 210 SPECTROMETER MANUFACTURER : NULL REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : NULL REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 1 REMARK 210 CONFORMERS, SELECTION CRITERIA : NULL REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 N THR A 525 OH TYR A 556 2.08 REMARK 500 O GLY A 535 O ASP A 542 2.09 REMARK 500 O ASP A 520 O ASP A 613 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 510 -151.86 -79.96 REMARK 500 THR A 524 38.59 -90.27 REMARK 500 THR A 525 162.44 -46.35 REMARK 500 GLN A 539 -39.74 -39.11 REMARK 500 LEU A 540 40.52 -105.26 REMARK 500 ASP A 542 -64.49 81.95 REMARK 500 TRP A 543 39.89 -173.91 REMARK 500 THR A 557 -67.17 -151.89 REMARK 500 SER A 558 -43.72 -148.19 REMARK 500 TYR A 564 148.65 151.89 REMARK 500 ALA A 571 97.68 76.90 REMARK 500 GLU A 573 147.11 174.78 REMARK 500 SER A 574 47.30 -84.16 REMARK 500 PHE A 575 160.09 -35.18 REMARK 500 GLU A 583 -169.49 -72.47 REMARK 500 GLU A 591 136.83 -37.29 REMARK 500 SER A 592 -135.45 -66.59 REMARK 500 ASN A 595 -165.40 -66.32 REMARK 500 GLN A 602 60.79 -112.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 581 0.21 SIDE_CHAIN REMARK 500 ARG A 596 0.28 SIDE_CHAIN REMARK 500 ARG A 616 0.30 SIDE_CHAIN REMARK 500 REMARK 500 REMARK: NULL
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1KUL RELATED DB: PDB
DBREF 1KUM A 509 616 UNP P69328 AMYG_ASPNG 533 640
SEQRES 1 A 108 CYS THR THR PRO THR ALA VAL ALA VAL THR PHE ASP LEU SEQRES 2 A 108 THR ALA THR THR THR TYR GLY GLU ASN ILE TYR LEU VAL SEQRES 3 A 108 GLY SER ILE SER GLN LEU GLY ASP TRP GLU THR SER ASP SEQRES 4 A 108 GLY ILE ALA LEU SER ALA ASP LYS TYR THR SER SER ASP SEQRES 5 A 108 PRO LEU TRP TYR VAL THR VAL THR LEU PRO ALA GLY GLU SEQRES 6 A 108 SER PHE GLU TYR LYS PHE ILE ARG ILE GLU SER ASP ASP SEQRES 7 A 108 SER VAL GLU TRP GLU SER ASP PRO ASN ARG GLU TYR THR SEQRES 8 A 108 VAL PRO GLN ALA CYS GLY THR SER THR ALA THR VAL THR SEQRES 9 A 108 ASP THR TRP ARG
HELIX 1 1 SER A 538 LEU A 540 5 3
SHEET 1 A 7 SER A 607 TRP A 615 0 SHEET 2 A 7 THR A 513 ALA A 523 1 N THR A 518 O ALA A 609 SHEET 3 A 7 PRO A 561 ALA A 571 -1 N VAL A 567 O VAL A 517 SHEET 4 A 7 ILE A 549 SER A 552 -1 N SER A 552 O TYR A 564 SHEET 5 A 7 ASN A 530 SER A 536 -1 N LEU A 533 O ILE A 549 SHEET 6 A 7 GLU A 573 ILE A 582 -1 N LYS A 578 O VAL A 534 SHEET 7 A 7 GLU A 589 GLU A 591 -1 N GLU A 589 O ARG A 581 SHEET 1 B 7 SER A 607 TRP A 615 0 SHEET 2 B 7 THR A 513 ALA A 523 1 N THR A 518 O ALA A 609 SHEET 3 B 7 PRO A 561 ALA A 571 -1 N VAL A 567 O VAL A 517 SHEET 4 B 7 ILE A 549 SER A 552 -1 N SER A 552 O TYR A 564 SHEET 5 B 7 ASN A 530 SER A 536 -1 N LEU A 533 O ILE A 549 SHEET 6 B 7 GLU A 573 ILE A 582 -1 N LYS A 578 O VAL A 534 SHEET 7 B 7 ARG A 596 VAL A 600 -1 N TYR A 598 O PHE A 575
SSBOND 1 CYS A 509 CYS A 604 1555 1555 2.02
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000