1KS6 - Header Asymmetric Unit

HEADER HORMONE/GROWTH FACTOR 10-JAN-02 1KS6

TITLE TRANSFORMING GROWTH FACTOR BETA TYPE II RECEPTOR LIGAND TITLE 2 BINDING DOMAIN

COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSFORMING GROWTH FACTOR BETA TYPE II RECEPTOR; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: LIGAND BINDING DOMAIN, SEQUENCE DATABASE COMPND 5 RESIDUES 34-142; COMPND 6 SYNONYM: TGFB TYPE II RECEPTOR; COMPND 7 ENGINEERED: YES

SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GALLUS GALLUS; SOURCE 3 ORGANISM_COMMON: CHICKEN; SOURCE 4 ORGANISM_TAXID: 9031; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET-32

KEYWDS THREE FINGER TOXIN FOLD, HORMONE/GROWTH FACTOR COMPLEX

EXPDTA SOLUTION NMR

NUMMDL 20

AUTHOR M.S.MARLOW,C.B.BROWN,J.V.BARNETT,A.M.KREZEL

REVDAT 2 24-FEB-09 1KS6 1 VERSN REVDAT 1 25-FEB-03 1KS6 0

JRNL AUTH M.S.MARLOW,C.B.BROWN,J.V.BARNETT,A.M.KREZEL JRNL TITL SOLUTION STRUCTURE OF THE CHICK TGFB TYPE II JRNL TITL 2 RECEPTOR LIGAND BINDING DOMAIN JRNL REF J.MOL.BIOL. V. 326 989 2003 JRNL REFN ISSN 0022-2836 JRNL PMID 12589747 JRNL DOI 10.1016/S0022-2836(03)00023-8

REMARK 1

REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.

REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : DYANA 1.5 REMARK 3 AUTHORS : GUENTERT REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL

REMARK 4 REMARK 4 1KS6 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08

REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-JAN-02. REMARK 100 THE RCSB ID CODE IS RCSB015286.

REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 300 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 1 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1-2MM TBRII NATURAL REMARK 210 ABUNDANCE; 1-2MM TBRII U-15N, REMARK 210 13C; 1-2MM TBRII U-15N,13C REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D NOESY, 3D_15N-SEPARATED_ REMARK 210 NOESY, 3D_13C-SEPARATED_NOESY, REMARK 210 HNCA-J REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ, 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : DYANA 1.5 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 6 REMARK 210 REMARK 210 REMARK: NULL

REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.

REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 PRO A 3 -123.90 -72.29 REMARK 500 1 ASN A 25 -1.37 73.48 REMARK 500 1 ASN A 27 37.94 -142.92 REMARK 500 1 ASN A 35 -178.43 167.19 REMARK 500 1 GLU A 37 155.91 -42.85 REMARK 500 1 ASP A 47 -98.80 42.62 REMARK 500 1 PRO A 59 31.35 -72.35 REMARK 500 1 ASP A 70 24.15 170.07 REMARK 500 1 LYS A 82 103.71 -54.36 REMARK 500 1 CYS A 93 134.92 -175.56 REMARK 500 1 GLU A 97 -2.73 56.03 REMARK 500 1 ALA A 106 -71.35 -62.53 REMARK 500 2 PRO A 3 -139.96 -72.44 REMARK 500 2 ASN A 18 66.83 -66.16 REMARK 500 2 ASN A 25 -10.23 73.60 REMARK 500 2 ASN A 35 176.10 177.43 REMARK 500 2 GLU A 37 163.33 -46.83 REMARK 500 2 ASP A 47 -99.29 42.13 REMARK 500 2 ASP A 70 46.70 78.97 REMARK 500 2 LYS A 82 102.87 -53.03 REMARK 500 2 CYS A 93 136.58 -179.48 REMARK 500 2 GLU A 97 22.58 42.26 REMARK 500 2 ALA A 106 28.05 -74.63 REMARK 500 3 ASN A 18 65.40 -66.51 REMARK 500 3 CYS A 32 60.51 -111.87 REMARK 500 3 ASN A 35 -35.72 66.61 REMARK 500 3 ASP A 47 -98.94 41.55 REMARK 500 3 PRO A 59 20.44 -72.44 REMARK 500 3 ASP A 70 28.11 166.81 REMARK 500 3 LYS A 82 102.03 -54.49 REMARK 500 3 CYS A 93 136.27 171.03 REMARK 500 3 GLU A 97 -5.99 57.03 REMARK 500 3 ALA A 106 -71.12 -84.88 REMARK 500 4 CYS A 32 25.49 -150.54 REMARK 500 4 ASN A 35 22.98 41.95 REMARK 500 4 GLU A 37 -171.34 174.35 REMARK 500 4 ASP A 47 -98.99 41.86 REMARK 500 4 PRO A 59 28.39 -72.42 REMARK 500 4 ASP A 70 58.88 179.14 REMARK 500 4 LYS A 82 103.69 -54.03 REMARK 500 4 CYS A 93 138.74 176.24 REMARK 500 4 GLU A 97 -0.09 54.83 REMARK 500 4 ALA A 106 44.07 -97.07 REMARK 500 5 LEU A 2 165.52 61.99 REMARK 500 5 PRO A 3 -112.43 -72.38 REMARK 500 5 PHE A 8 76.68 -109.95 REMARK 500 5 ALA A 13 108.63 -51.72 REMARK 500 5 ASN A 18 67.08 -65.44 REMARK 500 5 ASN A 25 -4.18 72.99 REMARK 500 5 ASN A 27 30.87 -145.90 REMARK 500 5 ASN A 35 -177.28 167.69 REMARK 500 5 GLU A 37 163.34 -46.91 REMARK 500 5 ASP A 47 -98.69 42.41 REMARK 500 5 ASP A 69 79.39 -150.38 REMARK 500 5 ASP A 70 60.92 179.14 REMARK 500 5 LYS A 82 103.93 -55.89 REMARK 500 5 GLU A 97 10.40 49.05 REMARK 500 6 ASN A 25 -10.25 72.11 REMARK 500 6 ASN A 27 43.04 -142.22 REMARK 500 6 CYS A 32 63.75 -113.26 REMARK 500 6 ASN A 35 -44.24 67.28 REMARK 500 6 ASP A 47 -98.35 43.03 REMARK 500 6 PRO A 59 33.77 -72.37 REMARK 500 6 ASP A 69 54.34 -144.78 REMARK 500 6 ASP A 70 49.84 177.04 REMARK 500 6 LYS A 82 102.70 -53.76 REMARK 500 6 CYS A 93 134.13 176.55 REMARK 500 6 GLU A 97 20.31 42.89 REMARK 500 7 LEU A 2 45.90 168.06 REMARK 500 7 PRO A 3 -122.36 -72.34 REMARK 500 7 ASN A 18 66.76 -69.28 REMARK 500 7 ASN A 25 -8.87 73.06 REMARK 500 7 ASN A 27 53.95 -141.96 REMARK 500 7 ASN A 35 -52.03 67.43 REMARK 500 7 ASN A 36 21.09 -79.91 REMARK 500 7 ASP A 47 -100.54 48.50 REMARK 500 7 PRO A 59 33.22 -72.36 REMARK 500 7 ASP A 69 75.15 -176.34 REMARK 500 7 ASP A 70 45.77 174.08 REMARK 500 7 CYS A 93 135.71 -172.01 REMARK 500 7 GLU A 97 17.07 44.92 REMARK 500 7 ALA A 106 31.66 -97.81 REMARK 500 8 PRO A 3 -110.76 -72.44 REMARK 500 8 PHE A 8 79.73 -115.35 REMARK 500 8 ASN A 18 65.72 -66.45 REMARK 500 8 ASN A 25 -5.78 72.92 REMARK 500 8 ASN A 27 51.93 -142.43 REMARK 500 8 ASN A 35 -45.05 67.50 REMARK 500 8 ASP A 47 -100.90 48.40 REMARK 500 8 PRO A 59 28.49 -72.38 REMARK 500 8 ASP A 70 66.38 166.80 REMARK 500 8 LYS A 82 104.33 -50.26 REMARK 500 8 CYS A 93 130.24 171.78 REMARK 500 8 GLU A 97 20.67 43.02 REMARK 500 8 ALA A 106 -77.91 -78.78 REMARK 500 9 PRO A 3 -94.94 -72.43 REMARK 500 9 ALA A 13 109.92 -51.37 REMARK 500 9 ASN A 18 50.69 -66.28 REMARK 500 9 ASN A 25 -6.35 73.40 REMARK 500 9 CYS A 32 46.90 -92.68 REMARK 500 9 ASN A 35 173.82 169.88 REMARK 500 9 GLU A 37 169.01 -49.53 REMARK 500 9 ASP A 47 -97.05 42.40 REMARK 500 9 PRO A 59 34.47 -72.45 REMARK 500 9 ASP A 70 80.02 178.95 REMARK 500 9 LYS A 82 102.00 -53.50 REMARK 500 9 CYS A 93 133.66 169.56 REMARK 500 9 GLU A 97 13.52 47.17 REMARK 500 10 LEU A 2 170.80 57.07 REMARK 500 10 PRO A 3 -104.82 -72.31 REMARK 500 10 ALA A 13 105.36 -48.74 REMARK 500 10 ASN A 25 -5.57 71.82 REMARK 500 10 ASN A 35 -40.88 64.84 REMARK 500 10 ASP A 47 -99.37 42.43 REMARK 500 10 PRO A 59 30.17 -72.42 REMARK 500 10 ASP A 69 66.85 -158.97 REMARK 500 10 ASP A 70 63.38 179.44 REMARK 500 10 LYS A 82 103.44 -52.82 REMARK 500 10 CYS A 93 132.10 173.38 REMARK 500 10 GLU A 97 -2.81 58.01 REMARK 500 11 PRO A 3 -80.00 -72.43 REMARK 500 11 ASN A 18 68.03 -64.88 REMARK 500 11 ASN A 25 -2.32 73.60 REMARK 500 11 ASN A 27 49.16 -147.30 REMARK 500 11 ASN A 35 178.95 167.06 REMARK 500 11 GLU A 37 162.28 -46.07 REMARK 500 11 ASP A 47 -98.48 42.23 REMARK 500 11 ASP A 70 50.87 -176.82 REMARK 500 11 LYS A 82 103.86 -54.09 REMARK 500 11 CYS A 93 136.47 173.72 REMARK 500 11 GLU A 97 21.04 42.93 REMARK 500 11 ALA A 106 75.24 -107.51 REMARK 500 12 LEU A 2 80.59 42.48 REMARK 500 12 PRO A 3 -163.93 -72.38 REMARK 500 12 ALA A 13 104.98 -55.04 REMARK 500 12 ASN A 18 67.05 -65.35 REMARK 500 12 ASN A 25 -3.79 72.54 REMARK 500 12 ASN A 27 43.30 -142.64 REMARK 500 12 ASN A 35 -27.59 64.32 REMARK 500 12 ASP A 47 -99.10 41.21 REMARK 500 12 PRO A 59 20.22 -72.35 REMARK 500 12 ASP A 70 45.82 -179.55 REMARK 500 12 LYS A 82 103.56 -54.06 REMARK 500 12 CYS A 93 136.29 177.56 REMARK 500 12 GLU A 97 14.87 46.34 REMARK 500 12 ALA A 106 21.41 -143.25 REMARK 500 13 PRO A 3 -119.01 -72.40 REMARK 500 13 ASN A 18 65.93 -66.30 REMARK 500 13 ASN A 27 30.80 -146.23 REMARK 500 13 ASN A 35 -176.58 166.58 REMARK 500 13 GLU A 37 162.27 -46.23 REMARK 500 13 ASP A 47 -98.92 40.80 REMARK 500 13 ASP A 70 42.28 80.50 REMARK 500 13 LYS A 82 102.73 -56.84 REMARK 500 13 CYS A 93 135.63 -179.87 REMARK 500 13 GLU A 97 6.22 50.96 REMARK 500 14 PRO A 3 -161.90 -72.40 REMARK 500 14 ASN A 18 65.67 -66.37 REMARK 500 14 ASN A 25 -10.00 72.88 REMARK 500 14 CYS A 32 48.26 -150.85 REMARK 500 14 LYS A 34 21.88 -76.25 REMARK 500 14 ASN A 35 20.05 42.82 REMARK 500 14 ASP A 47 -98.44 41.89 REMARK 500 14 PRO A 59 22.02 -72.33 REMARK 500 14 ASP A 69 63.29 -154.86 REMARK 500 14 ASP A 70 48.84 177.34 REMARK 500 14 LYS A 82 103.45 -52.49 REMARK 500 14 CYS A 93 143.07 176.94 REMARK 500 14 GLU A 97 15.63 45.84 REMARK 500 14 ASP A 100 -8.11 -59.34 REMARK 500 14 ALA A 106 31.24 -68.46 REMARK 500 15 LEU A 2 158.97 -47.66 REMARK 500 15 PHE A 8 79.28 -118.71 REMARK 500 15 ASN A 18 66.12 -67.94 REMARK 500 15 ASN A 25 -10.37 72.71 REMARK 500 15 ASN A 35 -29.06 64.33 REMARK 500 15 ASP A 47 -98.62 42.78 REMARK 500 15 ASP A 70 90.41 -165.37 REMARK 500 15 SER A 71 3.03 -65.92 REMARK 500 15 LYS A 82 102.28 -52.62 REMARK 500 15 CYS A 93 137.51 -173.36 REMARK 500 15 GLU A 97 19.87 43.73 REMARK 500 16 LEU A 2 43.19 172.91 REMARK 500 16 PRO A 3 -111.73 -72.39 REMARK 500 16 ASN A 18 67.27 -65.85 REMARK 500 16 ASN A 27 30.37 -150.41 REMARK 500 16 ASN A 35 -55.19 65.89 REMARK 500 16 ASN A 36 21.28 -78.95 REMARK 500 16 ASP A 47 -101.36 47.18 REMARK 500 16 PRO A 59 24.95 -72.48 REMARK 500 16 ASP A 70 41.33 175.90 REMARK 500 16 CYS A 93 137.84 176.94 REMARK 500 16 GLU A 97 23.76 40.61 REMARK 500 17 LEU A 2 166.52 60.44 REMARK 500 17 ASN A 18 66.83 -65.11 REMARK 500 17 ASN A 27 31.11 -141.77 REMARK 500 17 ASN A 35 -178.33 175.93 REMARK 500 17 GLU A 37 163.82 -47.19 REMARK 500 17 ASP A 47 -99.32 43.34 REMARK 500 17 PRO A 59 21.27 -72.44 REMARK 500 17 ASP A 70 58.29 178.62 REMARK 500 17 LYS A 82 104.31 -52.98 REMARK 500 17 GLU A 97 -2.34 55.73 REMARK 500 18 PRO A 3 -145.21 -72.39 REMARK 500 18 ASN A 18 71.13 -64.00 REMARK 500 18 ASN A 25 -10.36 72.45 REMARK 500 18 CYS A 32 43.93 -147.92 REMARK 500 18 LYS A 34 23.17 -79.77 REMARK 500 18 ASN A 35 -177.78 175.04 REMARK 500 18 ASP A 47 -98.94 42.73 REMARK 500 18 ASP A 70 46.37 79.57 REMARK 500 18 CYS A 93 130.64 173.26 REMARK 500 18 GLU A 97 23.54 41.47 REMARK 500 19 LEU A 2 103.45 -42.97 REMARK 500 19 PRO A 3 -124.29 -72.43 REMARK 500 19 PHE A 8 78.97 -108.74 REMARK 500 19 ASN A 18 48.33 -66.96 REMARK 500 19 ASN A 25 -4.78 71.79 REMARK 500 19 ASN A 27 28.58 -144.27 REMARK 500 19 ASN A 35 -4.21 56.34 REMARK 500 19 GLU A 37 145.91 -170.81 REMARK 500 19 ASP A 47 -99.10 42.16 REMARK 500 19 PRO A 59 20.19 -72.44 REMARK 500 19 ASP A 69 32.87 -142.80 REMARK 500 19 GLU A 97 24.27 40.57 REMARK 500 20 LEU A 2 43.59 166.53 REMARK 500 20 PRO A 3 -111.35 -72.29 REMARK 500 20 ALA A 13 108.08 -49.34 REMARK 500 20 ASN A 18 66.02 -66.14 REMARK 500 20 ASN A 25 -10.12 71.07 REMARK 500 20 CYS A 32 59.48 -103.56 REMARK 500 20 ASN A 35 -42.01 67.20 REMARK 500 20 ASN A 36 21.17 -79.87 REMARK 500 20 ASP A 47 -100.70 48.55 REMARK 500 20 PRO A 59 41.75 -72.36 REMARK 500 20 GLN A 60 -60.31 -100.40 REMARK 500 20 ASP A 70 110.56 166.54 REMARK 500 20 SER A 71 2.78 -65.08 REMARK 500 20 LYS A 82 102.60 -55.94 REMARK 500 20 CYS A 93 137.31 173.07 REMARK 500 20 GLU A 97 -0.92 55.29 REMARK 500 REMARK 500 REMARK: NULL

DBREF 1KS6 A 1 107 UNP Q90999 Q90999_CHICK 36 142

SEQADV 1KS6 THR A 23 UNP Q90999 LYS 58 SEE REMARK 999

SEQRES 1 A 107 GLN LEU PRO ARG LEU CYS LYS PHE CYS ASP VAL LYS ALA SEQRES 2 A 107 THR THR CYS SER ASN GLN ASP GLN CYS THR SER ASN CYS SEQRES 3 A 107 ASN ILE THR SER ILE CYS GLU LYS ASN ASN GLU VAL CYS SEQRES 4 A 107 ALA ALA VAL TRP ARG ARG ASN ASP GLU ASN VAL THR LEU SEQRES 5 A 107 GLU THR ILE CYS HIS ASP PRO GLN LYS ARG LEU TYR GLY SEQRES 6 A 107 HIS MET LEU ASP ASP SER SER SER GLU GLN CYS VAL MET SEQRES 7 A 107 LYS GLU LYS LYS ASP ASP GLY GLY LEU MET PHE MET CYS SEQRES 8 A 107 SER CYS THR GLY GLU GLU CYS ASN ASP VAL LEU ILE PHE SEQRES 9 A 107 SER ALA ILE

HELIX 1 1 ARG A 62 HIS A 66 5 5

SHEET 1 A 2 LEU A 5 CYS A 6 0 SHEET 2 A 2 SER A 30 ILE A 31 -1 O SER A 30 N CYS A 6 SHEET 1 B 5 CYS A 9 ALA A 13 0 SHEET 2 B 5 ASN A 49 ILE A 55 -1 O THR A 54 N CYS A 9 SHEET 3 B 5 CYS A 39 ASN A 46 -1 N ASN A 46 O ASN A 49 SHEET 4 B 5 LEU A 87 CYS A 93 -1 O LEU A 87 N ARG A 45 SHEET 5 B 5 LYS A 79 LYS A 81 -1 N LYS A 81 O MET A 88

SSBOND 1 CYS A 6 CYS A 39 1555 1555 1.89 SSBOND 2 CYS A 9 CYS A 26 1555 1555 1.91 SSBOND 3 CYS A 16 CYS A 22 1555 1555 2.15 SSBOND 4 CYS A 32 CYS A 56 1555 1555 1.86 SSBOND 5 CYS A 76 CYS A 91 1555 1555 2.10 SSBOND 6 CYS A 93 CYS A 98 1555 1555 2.14

CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1

ORIGX1 1.000000 0.000000 0.000000 0.00000

ORIGX2 0.000000 1.000000 0.000000 0.00000

ORIGX3 0.000000 0.000000 1.000000 0.00000

SCALE1 1.000000 0.000000 0.000000 0.00000

SCALE2 0.000000 1.000000 0.000000 0.00000

SCALE3 0.000000 0.000000 1.000000 0.00000