10 20 30 40 50 60 70 80 1KQ8 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER TRANSCRIPTION 04-JAN-02 1KQ8
TITLE SOLUTION STRUCTURE OF WINGED HELIX PROTEIN HFH-1
COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEPATOCYTE NUCLEAR FACTOR 3 FORKHEAD HOMOLOG 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: HFH-1; HNF-3/FORKHEAD HOMOLOG-1; WINGED COMPND 5 HELIX/FORKHEAD TRANSCRIPTION FACTOR; COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 3 ORGANISM_COMMON: NORWAY RAT; SOURCE 4 ORGANISM_TAXID: 10116; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562
KEYWDS WINGED HELIX PROTEIN, HFH-1, NMR, STRUCTURE, TRANSCRIPTION
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR W.SHENG,M.RANCE,X.LIAO
REVDAT 5 24-FEB-09 1KQ8 1 VERSN REVDAT 4 25-FEB-03 1KQ8 1 REMARK REVDAT 3 18-MAR-02 1KQ8 1 JRNL REVDAT 2 22-FEB-02 1KQ8 1 AUTHOR JRNL REVDAT 1 22-JAN-02 1KQ8 0
JRNL AUTH W.SHENG,M.RANCE,X.LIAO JRNL TITL STRUCTURE COMPARISON OF TWO CONSERVED HNF-3/FKH JRNL TITL 2 PROTEINS HFH-1 AND GENESIS INDICATES THE EXISTENCE JRNL TITL 3 OF FOLDING DIFFERENCES IN THEIR COMPLEXES WITH A JRNL TITL 4 DNA BINDING SEQUENCE. JRNL REF BIOCHEMISTRY V. 41 3286 2002 JRNL REFN ISSN 0006-2960 JRNL PMID 11876636 JRNL DOI 10.1021/BI011908K
REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH I.MARSDEN,C.JIN,X.LIAO REMARK 1 TITL STRUCTURAL CHANGES IN THE REGION DIRECTLY ADJACENT REMARK 1 TITL 2 TO THE DNA-BINDING HELIX HIGHLIGHT A POSSIBLE REMARK 1 TITL 3 MECHANISM TO EXPLAIN THE OBSERVED CHANGES IN THE REMARK 1 TITL 4 SEQUENCE-SPECIFIC BINDING OF WINGED HELIX PROTEINS REMARK 1 REF J.MOL.BIOL. V. 278 293 1998 REMARK 1 REFN ISSN 0022-2836 REMARK 1 DOI 10.1006/JMBI.1998.1703 REMARK 1 REFERENCE 2 REMARK 1 AUTH C.JIN,I.MARSDEN,X.CHEN,X.LIAO REMARK 1 TITL SEQUENCE SPECIFIC COLLECTIVE MOTIONS IN A WINGED REMARK 1 TITL 2 HELIX DNA BINDING DOMAIN DETECTED BY 15N REMARK 1 TITL 3 RELAXATION NMR REMARK 1 REF BIOCHEMISTRY V. 37 6179 1998 REMARK 1 REFN ISSN 0006-2960 REMARK 1 DOI 10.1021/BI980031V
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : DYANA 1.5 REMARK 3 AUTHORS : GUNTER, P. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1KQ8 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-JAN-02. REMARK 100 THE RCSB ID CODE IS RCSB015223.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 290 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : NULL REMARK 210 SAMPLE CONTENTS : NULL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY, 3D_ REMARK 210 13C-SEPARATED_NOESY, HNCA-J, REMARK 210 HNHA REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ, 750 MHZ, 800 MHZ REMARK 210 SPECTROMETER MODEL : DRX, DMX, UNITYPLUS REMARK 210 SPECTROMETER MANUFACTURER : BRUKER, VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-20 REMARK 465 RES C SSSEQI REMARK 465 PRO A 2 REMARK 465 LYS A 3 REMARK 465 PRO A 4 REMARK 465 PRO A 5 REMARK 465 TYR A 6 REMARK 465 SER A 7 REMARK 465 ASN A 83 REMARK 465 SER A 84 REMARK 465 GLU A 85 REMARK 465 TYR A 86 REMARK 465 THR A 87 REMARK 465 PHE A 88 REMARK 465 ALA A 89 REMARK 465 ASP A 90 REMARK 465 GLY A 91 REMARK 465 VAL A 92 REMARK 465 PHE A 93 REMARK 465 ARG A 94 REMARK 465 ARG A 95 REMARK 465 ARG A 96 REMARK 465 ARG A 97 REMARK 465 TYR A 98 REMARK 465 ARG A 99 REMARK 465 LEU A 100 REMARK 465 SER A 101
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 19 -142.05 -89.09 REMARK 500 1 ALA A 20 33.61 -168.50 REMARK 500 1 SER A 43 -69.55 -143.50 REMARK 500 1 TYR A 44 107.99 -169.93 REMARK 500 1 ASN A 58 -76.16 -108.43 REMARK 500 1 CYS A 60 59.77 88.93 REMARK 500 1 PHE A 61 -169.52 -119.19 REMARK 500 1 ARG A 66 89.01 40.34 REMARK 500 1 SER A 69 65.74 -177.59 REMARK 500 1 TRP A 72 -36.89 91.33 REMARK 500 1 LYS A 74 51.20 177.30 REMARK 500 2 SER A 19 -144.33 -86.23 REMARK 500 2 ALA A 20 31.68 -166.07 REMARK 500 2 SER A 43 -79.93 -135.47 REMARK 500 2 TYR A 44 119.44 -165.65 REMARK 500 2 ASN A 58 -88.93 -99.21 REMARK 500 2 CYS A 60 64.47 92.46 REMARK 500 2 PHE A 61 -165.33 -119.22 REMARK 500 2 ARG A 66 95.42 49.01 REMARK 500 2 SER A 69 58.05 -176.32 REMARK 500 2 ARG A 70 65.35 -170.45 REMARK 500 2 TRP A 72 25.16 48.63 REMARK 500 2 LYS A 74 42.45 -161.57 REMARK 500 2 ASP A 75 -68.85 -175.61 REMARK 500 3 SER A 19 -143.28 -82.79 REMARK 500 3 ALA A 20 32.91 -169.32 REMARK 500 3 SER A 43 -72.97 -150.30 REMARK 500 3 TYR A 44 117.65 -174.81 REMARK 500 3 ASN A 58 -89.84 -98.39 REMARK 500 3 CYS A 60 63.88 91.40 REMARK 500 3 PHE A 61 -165.33 -119.73 REMARK 500 3 SER A 69 41.04 177.50 REMARK 500 3 ARG A 70 68.52 -171.57 REMARK 500 3 TRP A 72 -38.58 80.63 REMARK 500 3 LYS A 74 -40.74 -173.24 REMARK 500 3 ASN A 81 75.97 -167.49 REMARK 500 4 ALA A 20 43.24 82.19 REMARK 500 4 SER A 43 -76.82 -69.90 REMARK 500 4 THR A 45 48.67 -94.02 REMARK 500 4 ASN A 58 -80.97 -93.06 REMARK 500 4 CYS A 60 78.90 95.77 REMARK 500 4 PHE A 61 -166.52 -123.96 REMARK 500 4 ARG A 66 75.80 -154.97 REMARK 500 4 SER A 69 41.81 -167.25 REMARK 500 4 ARG A 70 67.31 -165.32 REMARK 500 4 TRP A 72 -40.06 -178.52 REMARK 500 4 LYS A 74 -40.16 -173.34 REMARK 500 5 SER A 19 -149.71 -86.19 REMARK 500 5 ALA A 20 23.18 -154.45 REMARK 500 5 SER A 43 -74.80 -69.48 REMARK 500 5 TYR A 44 132.81 -174.67 REMARK 500 5 THR A 45 47.87 -98.66 REMARK 500 5 CYS A 60 69.90 90.40 REMARK 500 5 ARG A 66 71.14 40.74 REMARK 500 6 SER A 19 -146.12 -95.04 REMARK 500 6 ALA A 20 25.60 -155.96 REMARK 500 6 SER A 43 -75.73 -69.81 REMARK 500 6 TYR A 44 123.37 -170.10 REMARK 500 6 THR A 45 33.14 -91.23 REMARK 500 6 ASN A 58 -72.55 -80.62 REMARK 500 6 CYS A 60 57.91 88.20 REMARK 500 6 PHE A 61 -167.71 -119.23 REMARK 500 6 ARG A 66 107.96 61.18 REMARK 500 6 ASP A 67 -54.05 172.64 REMARK 500 6 ARG A 70 62.10 38.46 REMARK 500 6 PRO A 71 -166.51 -75.04 REMARK 500 6 LYS A 74 -42.88 -166.45 REMARK 500 7 SER A 19 -149.63 -83.80 REMARK 500 7 ALA A 20 30.14 -166.25 REMARK 500 7 SER A 43 -71.47 -155.41 REMARK 500 7 TYR A 44 105.99 -163.99 REMARK 500 7 ASN A 58 -74.16 -106.82 REMARK 500 7 CYS A 60 65.33 91.30 REMARK 500 7 PHE A 61 -166.19 -119.12 REMARK 500 7 ASP A 67 108.15 177.49 REMARK 500 7 TRP A 72 38.73 -178.36 REMARK 500 7 LYS A 74 -46.60 -173.39 REMARK 500 7 ASP A 75 -66.52 -161.78 REMARK 500 8 SER A 19 -144.82 -84.30 REMARK 500 8 ALA A 20 31.49 -167.86 REMARK 500 8 SER A 43 -76.81 -138.25 REMARK 500 8 TYR A 44 118.51 -168.33 REMARK 500 8 ASN A 58 -92.26 -96.46 REMARK 500 8 CYS A 60 62.44 88.82 REMARK 500 8 PHE A 61 -164.74 -119.22 REMARK 500 8 LEU A 65 152.82 -39.46 REMARK 500 8 ARG A 66 106.50 -52.22 REMARK 500 8 SER A 69 -72.99 -172.80 REMARK 500 8 ARG A 70 99.14 -38.69 REMARK 500 8 LYS A 74 22.60 -150.98 REMARK 500 8 ASP A 75 -65.20 -166.30 REMARK 500 9 SER A 19 -146.12 -88.35 REMARK 500 9 ALA A 20 36.41 -168.84 REMARK 500 9 SER A 43 -66.40 -139.34 REMARK 500 9 THR A 45 48.68 -82.80 REMARK 500 9 TRP A 47 -82.45 -101.69 REMARK 500 9 ASN A 58 -88.98 -95.42 REMARK 500 9 CYS A 60 84.79 88.06 REMARK 500 9 PHE A 61 -167.19 -127.09 REMARK 500 9 SER A 69 69.30 -174.85 REMARK 500 9 ARG A 70 64.46 -160.00 REMARK 500 9 LYS A 74 38.22 -151.32 REMARK 500 10 SER A 19 -143.68 -85.14 REMARK 500 10 ALA A 20 33.07 -170.25 REMARK 500 10 SER A 43 -64.82 -134.65 REMARK 500 10 TYR A 44 96.41 -38.38 REMARK 500 10 THR A 45 -42.81 -134.60 REMARK 500 10 ASN A 58 -77.36 -89.51 REMARK 500 10 PHE A 61 -165.94 -118.75 REMARK 500 10 ARG A 66 77.62 42.49 REMARK 500 10 SER A 69 -46.51 -132.55 REMARK 500 10 LYS A 74 47.66 172.10 REMARK 500 10 ASP A 75 145.21 -178.58 REMARK 500 10 ASN A 81 144.50 -172.68 REMARK 500 11 SER A 19 -146.03 -91.87 REMARK 500 11 ALA A 20 32.97 -170.08 REMARK 500 11 SER A 43 -82.13 -156.45 REMARK 500 11 ASN A 58 -67.67 -106.14 REMARK 500 11 CYS A 60 64.14 85.72 REMARK 500 11 PHE A 61 -163.26 -119.33 REMARK 500 11 LEU A 65 24.85 -151.65 REMARK 500 11 SER A 69 56.14 -178.32 REMARK 500 11 LYS A 74 -42.35 173.44 REMARK 500 12 ALA A 20 43.07 90.34 REMARK 500 12 SER A 43 -75.13 -152.14 REMARK 500 12 TYR A 44 115.43 -173.12 REMARK 500 12 ASN A 58 -54.13 -123.73 REMARK 500 12 CYS A 60 69.92 75.56 REMARK 500 12 PHE A 61 -165.46 -127.31 REMARK 500 12 ASP A 67 80.30 178.87 REMARK 500 12 ARG A 70 63.37 -157.85 REMARK 500 12 PRO A 71 -169.08 -74.94 REMARK 500 12 LYS A 74 46.41 -159.75 REMARK 500 13 SER A 19 -144.73 -91.77 REMARK 500 13 ALA A 20 34.51 -173.05 REMARK 500 13 SER A 43 -85.87 -126.95 REMARK 500 13 THR A 45 53.27 -91.13 REMARK 500 13 ASN A 58 -86.79 -60.10 REMARK 500 13 CYS A 60 56.07 98.49 REMARK 500 13 PHE A 61 -166.45 -119.11 REMARK 500 13 ARG A 66 94.56 48.83 REMARK 500 13 SER A 69 -51.00 -136.62 REMARK 500 13 TRP A 72 38.77 -176.14 REMARK 500 13 LYS A 74 -53.34 179.71 REMARK 500 13 ASP A 75 -64.29 -153.95 REMARK 500 14 ALA A 20 41.61 82.99 REMARK 500 14 SER A 43 -76.63 -69.71 REMARK 500 14 THR A 45 39.82 -94.83 REMARK 500 14 ASN A 58 -76.00 -77.02 REMARK 500 14 CYS A 60 61.25 84.65 REMARK 500 14 PHE A 61 -165.50 -119.32 REMARK 500 14 LEU A 65 62.24 -156.96 REMARK 500 14 ARG A 66 99.90 176.84 REMARK 500 14 ASP A 67 155.01 172.84 REMARK 500 14 SER A 69 75.68 174.10 REMARK 500 14 ARG A 70 -53.90 168.73 REMARK 500 14 LYS A 74 41.12 175.30 REMARK 500 15 ALA A 20 45.33 91.87 REMARK 500 15 SER A 43 -76.59 -70.04 REMARK 500 15 THR A 45 37.95 -89.39 REMARK 500 15 ASN A 58 -81.44 -103.44 REMARK 500 15 CYS A 60 66.59 92.98 REMARK 500 15 PHE A 61 -164.58 -119.50 REMARK 500 15 LEU A 65 83.43 -62.70 REMARK 500 15 ARG A 66 69.85 34.85 REMARK 500 15 ARG A 70 105.10 -47.96 REMARK 500 15 LYS A 74 57.32 -163.62 REMARK 500 15 ASN A 81 133.12 -175.38 REMARK 500 16 SER A 19 -145.98 -74.20 REMARK 500 16 ALA A 20 30.89 -166.53 REMARK 500 16 SER A 43 -56.52 -125.99 REMARK 500 16 TYR A 44 81.49 -59.88 REMARK 500 16 ASN A 58 -79.31 -108.60 REMARK 500 16 CYS A 60 66.29 89.12 REMARK 500 16 PHE A 61 -164.56 -122.59 REMARK 500 16 LEU A 65 -75.05 -91.55 REMARK 500 16 SER A 69 -62.04 -136.71 REMARK 500 16 TRP A 72 40.85 179.66 REMARK 500 16 ASP A 75 -66.47 -168.85 REMARK 500 17 SER A 19 -145.77 -86.52 REMARK 500 17 ALA A 20 33.87 -171.61 REMARK 500 17 SER A 43 -71.02 -134.66 REMARK 500 17 TRP A 47 -75.11 -106.65 REMARK 500 17 ASN A 58 -94.58 -85.34 REMARK 500 17 CYS A 60 86.59 82.97 REMARK 500 17 PHE A 61 -165.52 -128.91 REMARK 500 17 LEU A 65 -51.28 -127.22 REMARK 500 17 SER A 69 -54.74 -142.51 REMARK 500 17 LYS A 74 30.28 -160.98 REMARK 500 18 ALA A 20 49.21 86.35 REMARK 500 18 ARG A 41 30.65 -99.39 REMARK 500 18 SER A 43 -77.56 -69.74 REMARK 500 18 THR A 45 36.82 -89.99 REMARK 500 18 ASN A 58 -77.47 -101.11 REMARK 500 18 CYS A 60 71.03 94.76 REMARK 500 18 PHE A 61 -165.10 -125.76 REMARK 500 18 ARG A 66 64.96 38.51 REMARK 500 18 SER A 69 -56.46 -153.73 REMARK 500 18 ASP A 75 -69.80 171.23 REMARK 500 19 SER A 19 -143.95 -91.23 REMARK 500 19 ALA A 20 33.98 -171.05 REMARK 500 19 TYR A 44 107.50 -163.02 REMARK 500 19 ASN A 58 -78.27 -103.24 REMARK 500 19 CYS A 60 63.63 88.81 REMARK 500 19 PHE A 61 -167.00 -119.39 REMARK 500 19 LEU A 65 177.76 60.28 REMARK 500 19 SER A 69 -46.40 -149.25 REMARK 500 19 PRO A 71 49.71 -74.94 REMARK 500 19 LYS A 74 39.52 75.93 REMARK 500 20 ALA A 20 38.92 92.82 REMARK 500 20 SER A 43 -72.26 -151.18 REMARK 500 20 TYR A 44 105.66 -168.58 REMARK 500 20 CYS A 60 72.30 86.37 REMARK 500 20 PHE A 61 -165.70 -125.99 REMARK 500 20 LEU A 65 154.87 -39.23 REMARK 500 20 ARG A 66 86.35 -60.77 REMARK 500 20 LYS A 74 41.77 -162.58 REMARK 500 REMARK 500 REMARK: NULL
DBREF 1KQ8 A 2 101 UNP Q63244 FOXQ1_RAT 99 198
SEQADV 1KQ8 THR A 13 UNP Q63244 ALA 110 CONFLICT SEQADV 1KQ8 TYR A 98 UNP Q63244 LYS 195 CONFLICT
SEQRES 1 A 100 PRO LYS PRO PRO TYR SER TYR ILE ALA LEU ILE THR MET SEQRES 2 A 100 ALA ILE ARG ASP SER ALA GLY GLY ARG LEU THR LEU ALA SEQRES 3 A 100 GLU ILE ASN GLU TYR LEU MET GLY LYS PHE PRO PHE PHE SEQRES 4 A 100 ARG GLY SER TYR THR GLY TRP ARG ASN SER VAL ARG HIS SEQRES 5 A 100 ASN LEU SER LEU ASN ASP CYS PHE VAL LYS VAL LEU ARG SEQRES 6 A 100 ASP PRO SER ARG PRO TRP GLY LYS ASP ASN TYR TRP MET SEQRES 7 A 100 LEU ASN PRO ASN SER GLU TYR THR PHE ALA ASP GLY VAL SEQRES 8 A 100 PHE ARG ARG ARG ARG TYR ARG LEU SER
HELIX 1 1 TYR A 8 ARG A 17 1 10 HELIX 2 2 THR A 25 PHE A 37 1 13 HELIX 3 3 PHE A 39 SER A 43 5 5 HELIX 4 4 TRP A 47 ASP A 59 1 13
SHEET 1 A 2 VAL A 62 LYS A 63 0 SHEET 2 A 2 TRP A 78 MET A 79 -1 O MET A 79 N VAL A 62
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000