10 20 30 40 50 60 70 80 1KBC - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER METALLOPROTEINASE 29-APR-97 1KBC
TITLE PROCARBOXYPEPTIDASE TERNARY COMPLEX
COMPND MOL_ID: 1; COMPND 2 MOLECULE: NEUTROPHIL COLLAGENASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: CATALYTIC DOMAIN; COMPND 5 SYNONYM: MMP-8; COMPND 6 EC: 3.4.24.34; COMPND 7 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 OTHER_DETAILS: OBTAINED AS INCLUSION BODIES AND BY SOURCE 8 POSTERIOR REFOLDING
KEYWDS HYDROLYTIC ENZYME, METALLOPROTEINASE, COLLAGENASE, MATRIXIN, KEYWDS 2 MMP-8, HNC, INHIBITOR, HYDROLASE
EXPDTA X-RAY DIFFRACTION
AUTHOR M.BETZ,F.X.GOMIS-RUETH,W.BODE
REVDAT 3 24-FEB-09 1KBC 1 VERSN REVDAT 2 01-APR-03 1KBC 1 JRNL REVDAT 1 12-AUG-97 1KBC 0
JRNL AUTH M.BETZ,P.HUXLEY,S.J.DAVIES,Y.MUSHTAQ,M.PIEPER, JRNL AUTH 2 H.TSCHESCHE,W.BODE,F.X.GOMIS-RUTH JRNL TITL 1.8-A CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF JRNL TITL 2 HUMAN NEUTROPHIL COLLAGENASE (MATRIX JRNL TITL 3 METALLOPROTEINASE-8) COMPLEXED WITH A JRNL TITL 4 PEPTIDOMIMETIC HYDROXAMATE PRIMED-SIDE INHIBITOR JRNL TITL 5 WITH A DISTINCT SELECTIVITY PROFILE. JRNL REF EUR.J.BIOCHEM. V. 247 356 1997 JRNL REFN ISSN 0014-2956 JRNL PMID 9249047 JRNL DOI 10.1111/J.1432-1033.1997.00356.X
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.1 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 6.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 34348 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : 0.191 REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2588 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 8 REMARK 3 SOLVENT ATOMS : 303 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.70 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.012 REMARK 3 BOND ANGLES (DEGREES) : 1.66 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1KBC COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM, CCP4 REMARK 200 DATA SCALING SOFTWARE : CCP4 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35353 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.810 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.6 REMARK 200 DATA REDUNDANCY : 4.300 REMARK 200 R MERGE (I) : 0.06600 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.96 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.70 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 22.35000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 54.05000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 40.40000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 54.05000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 22.35000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 40.40000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ASN A 188 N ASN A 188 CA 0.205 REMARK 500 TYR A 189 N TYR A 189 CA 0.145 REMARK 500 TYR B 189 CB TYR B 189 CG 0.114 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASN A 188 N - CA - CB ANGL. DEV. = -15.1 DEGREES REMARK 500 TYR A 189 N - CA - CB ANGL. DEV. = -13.3 DEGREES REMARK 500 TYR A 189 C - N - CA ANGL. DEV. = 23.1 DEGREES REMARK 500 TYR B 189 CB - CG - CD2 ANGL. DEV. = 8.6 DEGREES REMARK 500 TYR B 189 CB - CG - CD1 ANGL. DEV. = -9.0 DEGREES REMARK 500 TYR B 189 C - N - CA ANGL. DEV. = 35.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 145 -130.04 39.87 REMARK 500 ASN A 157 -150.57 64.42 REMARK 500 THR A 185 -164.76 -128.17 REMARK 500 ASN A 226 55.21 -118.81 REMARK 500 ARG B 145 -127.90 39.90 REMARK 500 ASN B 157 -148.93 65.27 REMARK 500 THR B 185 -168.19 -128.40 REMARK 500 SER B 225 -69.72 -28.80 REMARK 500 REMARK 500 REMARK: NULL
REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B1032 DISTANCE = 5.64 ANGSTROMS REMARK 525 HOH B1033 DISTANCE = 8.21 ANGSTROMS REMARK 525 HOH B1039 DISTANCE = 6.50 ANGSTROMS REMARK 525 HOH B1041 DISTANCE = 5.54 ANGSTROMS REMARK 525 HOH B1049 DISTANCE = 5.04 ANGSTROMS REMARK 525 HOH B1054 DISTANCE = 11.41 ANGSTROMS REMARK 525 HOH A1056 DISTANCE = 10.76 ANGSTROMS REMARK 525 HOH A1062 DISTANCE = 5.32 ANGSTROMS REMARK 525 HOH A1070 DISTANCE = 7.55 ANGSTROMS REMARK 525 HOH B1076 DISTANCE = 5.71 ANGSTROMS REMARK 525 HOH A1080 DISTANCE = 5.27 ANGSTROMS REMARK 525 HOH A1081 DISTANCE = 8.06 ANGSTROMS REMARK 525 HOH B1086 DISTANCE = 6.30 ANGSTROMS REMARK 525 HOH B1091 DISTANCE = 5.56 ANGSTROMS REMARK 525 HOH B1093 DISTANCE = 8.18 ANGSTROMS REMARK 525 HOH A1108 DISTANCE = 7.31 ANGSTROMS REMARK 525 HOH A1109 DISTANCE = 5.89 ANGSTROMS REMARK 525 HOH A1119 DISTANCE = 7.09 ANGSTROMS REMARK 525 HOH A1132 DISTANCE = 6.92 ANGSTROMS REMARK 525 HOH A1133 DISTANCE = 7.73 ANGSTROMS REMARK 525 HOH A1134 DISTANCE = 8.13 ANGSTROMS REMARK 525 HOH A1147 DISTANCE = 5.83 ANGSTROMS REMARK 525 HOH A1152 DISTANCE = 5.59 ANGSTROMS REMARK 525 HOH A1162 DISTANCE = 5.39 ANGSTROMS REMARK 525 HOH A1163 DISTANCE = 7.51 ANGSTROMS REMARK 525 HOH A1166 DISTANCE = 7.39 ANGSTROMS REMARK 525 HOH A1171 DISTANCE = 6.54 ANGSTROMS REMARK 525 HOH A1173 DISTANCE = 5.04 ANGSTROMS REMARK 525 HOH A1174 DISTANCE = 6.55 ANGSTROMS REMARK 525 HOH A1190 DISTANCE = 9.40 ANGSTROMS REMARK 525 HOH A1193 DISTANCE = 5.38 ANGSTROMS REMARK 525 HOH A1203 DISTANCE = 5.19 ANGSTROMS REMARK 525 HOH A1204 DISTANCE = 8.21 ANGSTROMS REMARK 525 HOH A1206 DISTANCE = 5.45 ANGSTROMS
REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 996 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 137 O REMARK 620 2 GLY A 169 O 166.5 REMARK 620 3 GLY A 171 O 96.8 93.3 REMARK 620 4 ASP A 173 OD1 89.6 99.5 89.4 REMARK 620 5 HOH A1078 O 82.2 90.7 80.0 165.7 REMARK 620 6 HOH A1085 O 91.3 77.2 165.8 102.4 89.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 997 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 154 OD1 REMARK 620 2 ASN A 157 O 90.1 REMARK 620 3 ILE A 159 O 90.2 91.4 REMARK 620 4 ASP A 177 OD2 90.7 173.0 95.5 REMARK 620 5 GLU A 180 OE2 174.5 87.7 94.9 90.9 REMARK 620 6 GLY A 155 O 85.1 87.7 175.3 85.4 89.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 998 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 147 NE2 REMARK 620 2 ASP A 149 OD2 106.1 REMARK 620 3 HIS A 162 NE2 121.6 114.8 REMARK 620 4 HIS A 175 ND1 110.8 94.2 106.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 999 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 197 NE2 REMARK 620 2 HIS A 201 NE2 103.7 REMARK 620 3 HIS A 207 NE2 107.4 99.3 REMARK 620 4 HLE A 1 OH 101.7 83.8 149.0 REMARK 620 5 HLE A 1 O2 105.3 147.8 85.2 76.8 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 996 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 137 O REMARK 620 2 GLY B 171 O 94.1 REMARK 620 3 ASP B 173 OD1 87.1 91.2 REMARK 620 4 HOH B1023 O 90.6 165.2 103.1 REMARK 620 5 HOH B1024 O 86.1 81.7 169.8 84.6 REMARK 620 6 GLY B 169 O 168.0 94.3 101.3 79.2 86.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 997 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 154 OD1 REMARK 620 2 GLY B 155 O 90.3 REMARK 620 3 ASN B 157 O 96.6 90.8 REMARK 620 4 ASP B 177 OD2 94.0 82.0 167.2 REMARK 620 5 GLU B 180 OE2 175.7 91.5 79.5 90.1 REMARK 620 6 ILE B 159 O 84.7 174.9 90.5 97.6 93.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 998 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 147 NE2 REMARK 620 2 ASP B 149 OD2 106.7 REMARK 620 3 HIS B 162 NE2 118.9 120.8 REMARK 620 4 HIS B 175 ND1 106.9 91.5 107.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 999 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 197 NE2 REMARK 620 2 HIS B 201 NE2 100.6 REMARK 620 3 HIS B 207 NE2 107.9 98.2 REMARK 620 4 HLE B 1 OH 104.6 83.4 146.6 REMARK 620 5 HLE B 1 O2 106.9 149.5 85.8 77.2 REMARK 620 N 1 2 3 4
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 996 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 997 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 998 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 999 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 996 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 997 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 998 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 999 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HLE A 1 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE RIN A 2 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HLE B 1 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE RIN B 2
DBREF 1KBC A 79 242 UNP P22894 MM08_HUMAN 99 262 DBREF 1KBC B 79 242 UNP P22894 MM08_HUMAN 99 262
SEQRES 1 A 164 PHE MET LEU THR PRO GLY ASN PRO LYS TRP GLU ARG THR SEQRES 2 A 164 ASN LEU THR TYR ARG ILE ARG ASN TYR THR PRO GLN LEU SEQRES 3 A 164 SER GLU ALA GLU VAL GLU ARG ALA ILE LYS ASP ALA PHE SEQRES 4 A 164 GLU LEU TRP SER VAL ALA SER PRO LEU ILE PHE THR ARG SEQRES 5 A 164 ILE SER GLN GLY GLU ALA ASP ILE ASN ILE ALA PHE TYR SEQRES 6 A 164 GLN ARG ASP HIS GLY ASP ASN SER PRO PHE ASP GLY PRO SEQRES 7 A 164 ASN GLY ILE LEU ALA HIS ALA PHE GLN PRO GLY GLN GLY SEQRES 8 A 164 ILE GLY GLY ASP ALA HIS PHE ASP ALA GLU GLU THR TRP SEQRES 9 A 164 THR ASN THR SER ALA ASN TYR ASN LEU PHE LEU VAL ALA SEQRES 10 A 164 ALA HIS GLU PHE GLY HIS SER LEU GLY LEU ALA HIS SER SEQRES 11 A 164 SER ASP PRO GLY ALA LEU MET TYR PRO ASN TYR ALA PHE SEQRES 12 A 164 ARG GLU THR SER ASN TYR SER LEU PRO GLN ASP ASP ILE SEQRES 13 A 164 ASP GLY ILE GLN ALA ILE TYR GLY SEQRES 1 B 164 PHE MET LEU THR PRO GLY ASN PRO LYS TRP GLU ARG THR SEQRES 2 B 164 ASN LEU THR TYR ARG ILE ARG ASN TYR THR PRO GLN LEU SEQRES 3 B 164 SER GLU ALA GLU VAL GLU ARG ALA ILE LYS ASP ALA PHE SEQRES 4 B 164 GLU LEU TRP SER VAL ALA SER PRO LEU ILE PHE THR ARG SEQRES 5 B 164 ILE SER GLN GLY GLU ALA ASP ILE ASN ILE ALA PHE TYR SEQRES 6 B 164 GLN ARG ASP HIS GLY ASP ASN SER PRO PHE ASP GLY PRO SEQRES 7 B 164 ASN GLY ILE LEU ALA HIS ALA PHE GLN PRO GLY GLN GLY SEQRES 8 B 164 ILE GLY GLY ASP ALA HIS PHE ASP ALA GLU GLU THR TRP SEQRES 9 B 164 THR ASN THR SER ALA ASN TYR ASN LEU PHE LEU VAL ALA SEQRES 10 B 164 ALA HIS GLU PHE GLY HIS SER LEU GLY LEU ALA HIS SER SEQRES 11 B 164 SER ASP PRO GLY ALA LEU MET TYR PRO ASN TYR ALA PHE SEQRES 12 B 164 ARG GLU THR SER ASN TYR SER LEU PRO GLN ASP ASP ILE SEQRES 13 B 164 ASP GLY ILE GLN ALA ILE TYR GLY
HET CA A 996 1 HET CA A 997 1 HET ZN A 998 1 HET ZN A 999 1 HET CA B 996 1 HET CA B 997 1 HET ZN B 998 1 HET ZN B 999 1 HET HLE A 1 13 HET RIN A 2 15 HET HLE B 1 13 HET RIN B 2 15
HETNAM CA CALCIUM ION HETNAM ZN ZINC ION HETNAM HLE 3-FORMYL-2-HYDROXY-5-METHYL-HEXANOIC ACID HYDROXYAMIDE HETNAM RIN 3-AMINO-AZACYCLOTRIDECAN-2-ONE
FORMUL 3 CA 4(CA 2+) FORMUL 5 ZN 4(ZN 2+) FORMUL 11 HLE 2(C8 H15 N O4) FORMUL 11 RIN 2(C12 H24 N2 O) FORMUL 13 HOH *303(H2 O)
HELIX 1 1 GLU A 106 VAL A 122 1 17 HELIX 2 2 LEU A 191 SER A 202 1 12 HELIX 3 3 GLN A 231 ILE A 240 1 10 HELIX 4 4 GLU B 106 ALA B 123 1 18 HELIX 5 5 LEU B 191 LEU B 203 1 13 HELIX 6 6 GLN B 231 ILE B 240 1 10
SHEET 1 A 5 ILE A 127 ARG A 130 0 SHEET 2 A 5 ASN A 92 ILE A 97 1 N LEU A 93 O ILE A 127 SHEET 3 A 5 ILE A 138 TYR A 143 1 N ILE A 138 O ARG A 96 SHEET 4 A 5 ALA A 174 ASP A 177 1 N ALA A 174 O ALA A 141 SHEET 5 A 5 ALA A 161 ALA A 163 -1 N HIS A 162 O HIS A 175 SHEET 1 B 5 ILE B 127 ARG B 130 0 SHEET 2 B 5 ASN B 92 ILE B 97 1 N LEU B 93 O ILE B 127 SHEET 3 B 5 ILE B 138 TYR B 143 1 N ILE B 138 O ARG B 96 SHEET 4 B 5 ALA B 174 ASP B 177 1 N ALA B 174 O ALA B 141 SHEET 5 B 5 ALA B 161 ALA B 163 -1 N HIS B 162 O HIS B 175
LINK CA CA A 996 O ASP A 137 1555 1555 2.30 LINK CA CA A 996 O GLY A 169 1555 1555 2.40 LINK CA CA A 996 O GLY A 171 1555 1555 2.30 LINK CA CA A 997 OD1 ASP A 154 1555 1555 2.37 LINK CA CA A 997 O ASN A 157 1555 1555 2.26 LINK CA CA A 997 O ILE A 159 1555 1555 2.25 LINK CA CA A 997 OD2 ASP A 177 1555 1555 2.34 LINK CA CA A 997 OE2 GLU A 180 1555 1555 2.26 LINK ZN ZN A 998 NE2 HIS A 147 1555 1555 1.97 LINK ZN ZN A 998 OD2 ASP A 149 1555 1555 1.90 LINK ZN ZN A 998 NE2 HIS A 162 1555 1555 1.89 LINK ZN ZN A 998 ND1 HIS A 175 1555 1555 2.12 LINK ZN ZN A 999 NE2 HIS A 197 1555 1555 2.14 LINK ZN ZN A 999 NE2 HIS A 201 1555 1555 2.10 LINK ZN ZN A 999 NE2 HIS A 207 1555 1555 2.06 LINK ZN ZN A 999 OH HLE A 1 1555 1555 2.14 LINK ZN ZN A 999 O2 HLE A 1 1555 1555 2.12 LINK C HLE A 1 N RIN A 2 1555 1555 1.32 LINK CA CA B 996 O ASP B 137 1555 1555 2.34 LINK CA CA B 996 O GLY B 171 1555 1555 2.38 LINK CA CA B 996 OD1 ASP B 173 1555 1555 2.36 LINK CA CA B 997 OD1 ASP B 154 1555 1555 2.35 LINK CA CA B 997 O GLY B 155 1555 1555 2.28 LINK CA CA B 997 O ASN B 157 1555 1555 2.28 LINK CA CA B 997 OD2 ASP B 177 1555 1555 2.34 LINK CA CA B 997 OE2 GLU B 180 1555 1555 2.29 LINK ZN ZN B 998 NE2 HIS B 147 1555 1555 2.01 LINK ZN ZN B 998 OD2 ASP B 149 1555 1555 1.89 LINK ZN ZN B 998 NE2 HIS B 162 1555 1555 1.97 LINK ZN ZN B 998 ND1 HIS B 175 1555 1555 2.13 LINK ZN ZN B 999 NE2 HIS B 197 1555 1555 2.00 LINK ZN ZN B 999 NE2 HIS B 201 1555 1555 2.13 LINK ZN ZN B 999 NE2 HIS B 207 1555 1555 2.09 LINK ZN ZN B 999 OH HLE B 1 1555 1555 2.04 LINK ZN ZN B 999 O2 HLE B 1 1555 1555 2.11 LINK C HLE B 1 N RIN B 2 1555 1555 1.32 LINK CA CA A 996 OD1 ASP A 173 1555 1555 2.40 LINK CA CA A 996 O HOH A1078 1555 1555 2.60 LINK CA CA A 996 O HOH A1085 1555 1555 2.24 LINK CA CA A 997 O GLY A 155 1555 1555 2.41 LINK CA CA B 996 O HOH B1023 1555 1555 2.53 LINK CA CA B 996 O HOH B1024 1555 1555 2.36 LINK CA CA B 996 O GLY B 169 1555 1555 2.40 LINK CA CA B 997 O ILE B 159 1555 1555 2.42
CISPEP 1 ASN A 188 TYR A 189 0 13.57 CISPEP 2 ASN B 188 TYR B 189 0 24.01
SITE 1 AC1 6 ASP A 137 GLY A 169 GLY A 171 ASP A 173 SITE 2 AC1 6 HOH A1078 HOH A1085 SITE 1 AC2 6 ASP A 154 GLY A 155 ASN A 157 ILE A 159 SITE 2 AC2 6 ASP A 177 GLU A 180 SITE 1 AC3 4 HIS A 147 ASP A 149 HIS A 162 HIS A 175 SITE 1 AC4 4 HLE A 1 HIS A 197 HIS A 201 HIS A 207 SITE 1 AC5 6 ASP B 137 GLY B 169 GLY B 171 ASP B 173 SITE 2 AC5 6 HOH B1023 HOH B1024 SITE 1 AC6 6 ASP B 154 GLY B 155 ASN B 157 ILE B 159 SITE 2 AC6 6 ASP B 177 GLU B 180 SITE 1 AC7 4 HIS B 147 ASP B 149 HIS B 162 HIS B 175 SITE 1 AC8 4 HLE B 1 HIS B 197 HIS B 201 HIS B 207 SITE 1 AC9 13 RIN A 2 ILE A 159 LEU A 160 ALA A 161 SITE 2 AC9 13 HIS A 197 GLU A 198 HIS A 201 HIS A 207 SITE 3 AC9 13 PRO A 217 ZN A 999 HOH A1033 HOH A1059 SITE 4 AC9 13 HOH A1194 SITE 1 BC1 9 HLE A 1 GLN A 144 GLY A 158 LEU A 160 SITE 2 BC1 9 TYR A 189 PRO A 217 ASN A 218 TYR A 219 SITE 3 BC1 9 HOH A1021 SITE 1 BC2 13 ASN A 150 HOH A1127 RIN B 2 ILE B 159 SITE 2 BC2 13 LEU B 160 ALA B 161 HIS B 197 GLU B 198 SITE 3 BC2 13 HIS B 201 HIS B 207 PRO B 217 ZN B 999 SITE 4 BC2 13 HOH B1015 SITE 1 BC3 6 ILE A 170 HLE B 1 GLY B 158 PRO B 217 SITE 2 BC3 6 ASN B 218 TYR B 219
CRYST1 44.700 80.800 108.100 90.00 90.00 90.00 P 21 21 21 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.022371 0.000000 0.000000 0.00000
SCALE2 0.000000 0.012376 0.000000 0.00000
SCALE3 0.000000 0.000000 0.009251 0.00000