1K5R - Header Asymmetric Unit

HEADER SIGNALING PROTEIN 12-OCT-01 1K5R

TITLE YAP65 WW DOMAIN S24-AMINO-ETHYLSULFANYL-ACETIC ACID MUTANT

COMPND MOL_ID: 1; COMPND 2 MOLECULE: 65 KDA YES-ASSOCIATED PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: WW DOMAIN, RESIDUES 5-44; COMPND 5 SYNONYM: YAP65; YES-ASSOCIATED PROTEIN 65 KDA; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 OTHER_DETAILS: 40-PEPTIDE CONSTRUCT WITH SYNTHETIC AMINO- COMPND 9 ETHYL-SULFANYL-ACETIC ACID LINK AT POSITION 24; COMPND 10 MOL_ID: 2; COMPND 11 MOLECULE: FRAGMENT OF WBP-1; COMPND 12 CHAIN: B; COMPND 13 ENGINEERED: YES

SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 OTHER_DETAILS: THE SEQUENCE OCCURS NATURALLY IN HUMANS; SOURCE 4 MOL_ID: 2; SOURCE 5 SYNTHETIC: YES; SOURCE 6 OTHER_DETAILS: THE SEQUENCE OCCURS NATURALLY IN HUMANS

KEYWDS WW DOMAIN, YAP65, BETA-SHEET PROTEINS, STABILITY OF BETA KEYWDS 2 SHEETS, SIGNALING PROTEIN

EXPDTA SOLUTION NMR

NUMMDL 10

AUTHOR N.FERGUSON,J.R.PIRES,F.TOEPERT,C.M.JOHNSON,Y.P.PAN, AUTHOR 2 R.VOLKMER-ENGERT,J.SCHNEIDER-MERGENER,V.DAGGETT,H.OSCHKINAT, AUTHOR 3 A.R.FERSHT

REVDAT 3 24-FEB-09 1K5R 1 VERSN REVDAT 2 30-SEP-03 1K5R 1 JRNL DBREF REVDAT 1 02-NOV-01 1K5R 0

JRNL AUTH N.FERGUSON,J.R.PIRES,F.TOEPERT,C.M.JOHNSON,Y.P.PAN, JRNL AUTH 2 R.VOLKMER-ENGERT,J.SCHNEIDER-MERGENER,V.DAGGETT, JRNL AUTH 3 H.OSCHKINAT,A.FERSHT JRNL TITL USING FLEXIBLE LOOP MIMETICS TO EXTEND PHI-VALUE JRNL TITL 2 ANALYSIS TO SECONDARY STRUCTURE INTERACTIONS. JRNL REF PROC.NATL.ACAD.SCI.USA V. 98 13008 2001 JRNL REFN ISSN 0027-8424 JRNL PMID 11687614 JRNL DOI 10.1073/PNAS.221467398

REMARK 1

REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.

REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.1 REMARK 3 AUTHORS : BRUNGER, A.T. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 2000K, 200 RUNS, FORCE CONSTANTS FOR REMARK 3 NOE 50 KCALMOL-1RAD-2, 590 RESTRAINTS

REMARK 4 REMARK 4 1K5R COMPLIES WITH FORMAT V. 3.15, 01-DEC-08

REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-OCT-01. REMARK 100 THE RCSB ID CODE IS RCSB014594.

REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 288; 288 REMARK 210 PH : 6; 6 REMARK 210 IONIC STRENGTH : 100 MM NACL; 100 MM NACL REMARK 210 PRESSURE : 1 ATM; 1 ATM REMARK 210 SAMPLE CONTENTS : PHOSPHATE BUFFER 10 MM, NACL REMARK 210 100MM, DTT 0.1MM, EDTA 0.1 MM, REMARK 210 PH 6, WW DOMAIN 1.2 MM LIGAND REMARK 210 2.4 MM; PHOSPHATE BUFFER 10 REMARK 210 MM, NACL 100MM, DTT 0.1MM, REMARK 210 EDTA 0.1 MM, PH 6 WW DOMAIN, REMARK 210 1.2 MM LIGAND 2.4 MM REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : DRX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 2.6, ANSIG 3.3 REMARK 210 METHOD USED : SIMULATED ANNELING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL

REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.

REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NH2 A 45

REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1JMQ RELATED DB: PDB REMARK 900 RELATED ID: 1EOM RELATED DB: PDB REMARK 900 RELATED ID: 1EG3 RELATED DB: PDB REMARK 900 RELATED ID: 1EG4 RELATED DB: PDB REMARK 900 RELATED ID: 1I5H RELATED DB: PDB

DBREF 1K5R A 5 44 UNP P46937 YAP1_HUMAN 165 204 DBREF 1K5R B 45 54 PDB 1K5R 1K5R 45 54

SEQADV 1K5R ESD A 24 UNP P46937 SER 184 MODIFIED RESIDUE

SEQRES 1 A 41 PHE GLU ILE PRO ASP ASP VAL PRO LEU PRO ALA GLY TRP SEQRES 2 A 41 GLU MET ALA LYS THR SER ESD GLY GLN ARG TYR PHE LEU SEQRES 3 A 41 ASN HIS ILE ASP GLN THR THR THR TRP GLN ASP PRO ARG SEQRES 4 A 41 LYS NH2 SEQRES 1 B 10 GLY THR PRO PRO PRO PRO TYR THR VAL GLY

HET ESD A 24 14 HET NH2 A 45 3

HETNAM ESD (2-AMINO-ETHYLSULFANYL)-ACETIC ACID HETNAM NH2 AMINO GROUP

FORMUL 1 ESD C4 H9 N O2 S FORMUL 1 NH2 H2 N

SHEET 1 A 3 TRP A 17 THR A 22 0 SHEET 2 A 3 GLN A 26 ASN A 31 -1 N TYR A 28 O ALA A 20 SHEET 3 A 3 THR A 36 THR A 38 -1 N THR A 37 O LEU A 30

LINK C SER A 23 N ESD A 24 1555 1555 1.31 LINK C ESD A 24 N GLY A 25 1555 1555 1.31 LINK C LYS A 44 N NH2 A 45 1555 1555 1.30

CISPEP 1 SER A 23 ESD A 24 6 3.35

SITE 1 AC1 1 LYS A 44

CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1

ORIGX1 1.000000 0.000000 0.000000 0.00000

ORIGX2 0.000000 1.000000 0.000000 0.00000

ORIGX3 0.000000 0.000000 1.000000 0.00000

SCALE1 1.000000 0.000000 0.000000 0.00000

SCALE2 0.000000 1.000000 0.000000 0.00000

SCALE3 0.000000 0.000000 1.000000 0.00000