10 20 30 40 50 60 70 80 1K0X - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER HORMONE/GROWTH FACTOR 21-SEP-01 1K0X
TITLE SOLUTION STRUCTURE OF MELANOMA INHIBITORY ACTIVITY PROTEIN
COMPND MOL_ID: 1; COMPND 2 MOLECULE: MELANOMA DERIVED GROWTH REGULATORY PROTEIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: MELANOMA INHIBITORY ACTIVITY; COMPND 5 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562
KEYWDS SH3 SUBDOMAIN, HORMONE/GROWTH FACTOR COMPLEX
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR J.C.LOUGHEED,P.J.DOMAILLE,T.M.HANDEL
REVDAT 2 24-FEB-09 1K0X 1 VERSN REVDAT 1 24-JUL-02 1K0X 0
JRNL AUTH J.C.LOUGHEED,P.J.DOMAILLE,T.M.HANDEL JRNL TITL SOLUTION STRUCTURE AND DYNAMICS OF MELANOMA JRNL TITL 2 INHIBITORY ACTIVITY PROTEIN. JRNL REF J.BIOMOL.NMR V. 22 211 2002 JRNL REFN ISSN 0925-2738 JRNL PMID 11991352 JRNL DOI 10.1023/A:1014961408029
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1K0X COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-SEP-01. REMARK 100 THE RCSB ID CODE IS RCSB014421.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 4.3 REMARK 210 IONIC STRENGTH : 20 MM SODIUM ACETATE REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : UNIFORM LABELING WITH 15N; REMARK 210 UNIFORM LABELING WITH 13C AND REMARK 210 15N; UNIFORM LABELING WITH 13C REMARK 210 AND 15N; UNIFORM LABELING WITH REMARK 210 13C AND 15N REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY, 4D_ REMARK 210 13C/15N-SEPARATED_NOESY, 3D_13C-SEPARATED_NOESY, 4D_13C- REMARK 210 SEPARATED_NOESY, 3D_13C-SEPARATED_NOESY(CENTERED ON AROMATIC REMARK 210 CARBONS), HNHA REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : DMX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : X-PLOR 3.851, ANSIG 3.3, REMARK 210 AZARA 2.0 REMARK 210 METHOD USED : RESTRAINED MOLECULAR DYNAMICS REMARK 210 -SIMULATED ANNEALING COUPLED REMARK 210 WITH THE AMBIGUOUS RESTRAINTS REMARK 210 FOR ITERATIVE ASSIGNMENT REMARK 210 (ARIA) EXTENSION OF NILGES (M. REMARK 210 NILGES, J. MOL. BIOL. 245, REMARK 210 645-660, 1995). REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 60 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 TYR A 69 -70.09 -121.47 REMARK 500 1 TYR A 70 44.98 35.25 REMARK 500 1 ASP A 72 -91.29 -131.70 REMARK 500 1 LEU A 73 -78.27 64.93 REMARK 500 1 ALA A 75 -17.26 -165.67 REMARK 500 1 LEU A 77 176.47 60.10 REMARK 500 1 ASP A 101 -167.77 -121.72 REMARK 500 2 PRO A 5 151.19 -49.26 REMARK 500 2 ARG A 56 -64.66 71.17 REMARK 500 2 TYR A 69 74.84 -119.54 REMARK 500 2 TYR A 70 12.72 -147.23 REMARK 500 2 LEU A 73 -86.02 62.31 REMARK 500 2 ALA A 75 -40.15 -152.89 REMARK 500 2 LEU A 77 169.33 61.73 REMARK 500 2 ASP A 88 -41.92 -147.95 REMARK 500 2 LYS A 92 130.90 -171.28 REMARK 500 2 LYS A 95 33.30 -142.97 REMARK 500 3 TYR A 70 -129.38 -82.53 REMARK 500 3 ALA A 74 -14.69 175.08 REMARK 500 3 ASP A 101 -122.03 -101.57 REMARK 500 4 LEU A 7 -37.96 73.09 REMARK 500 4 TYR A 69 -97.78 -136.64 REMARK 500 4 ASP A 72 113.97 -39.16 REMARK 500 4 LEU A 73 -39.32 -146.96 REMARK 500 4 LEU A 77 -179.90 57.79 REMARK 500 4 ASP A 88 -30.69 -153.64 REMARK 500 5 ARG A 56 25.02 43.88 REMARK 500 5 ARG A 58 -74.89 52.05 REMARK 500 5 GLN A 66 -93.94 -79.07 REMARK 500 5 TYR A 69 93.09 58.44 REMARK 500 5 ASP A 72 -40.53 -165.33 REMARK 500 5 ARG A 76 82.58 37.34 REMARK 500 6 ALA A 8 -162.92 -115.32 REMARK 500 6 LEU A 73 -34.61 -153.62 REMARK 500 6 ASP A 101 -112.41 -102.29 REMARK 500 6 CYS A 107 52.89 -105.13 REMARK 500 7 LEU A 7 5.31 56.39 REMARK 500 7 ASP A 9 -53.04 -139.44 REMARK 500 7 GLN A 66 76.73 -106.16 REMARK 500 7 ASP A 68 74.76 62.95 REMARK 500 7 LEU A 73 -50.17 -150.73 REMARK 500 7 ALA A 75 -30.94 -154.68 REMARK 500 7 LEU A 77 139.91 63.90 REMARK 500 7 PHE A 105 58.92 -148.61 REMARK 500 8 ASP A 9 -52.17 -121.40 REMARK 500 8 GLN A 66 135.30 -31.09 REMARK 500 8 TYR A 69 75.91 55.62 REMARK 500 8 ASP A 72 35.29 -148.29 REMARK 500 8 LEU A 73 -73.09 -79.51 REMARK 500 8 ALA A 75 -43.24 -146.46 REMARK 500 8 LEU A 77 143.59 65.94 REMARK 500 9 ASP A 72 80.23 56.35 REMARK 500 9 LEU A 73 -50.98 -139.63 REMARK 500 9 ALA A 74 59.77 -94.34 REMARK 500 9 LEU A 77 178.42 58.75 REMARK 500 10 ASP A 9 -44.28 -131.60 REMARK 500 10 ASP A 72 -43.31 -152.69 REMARK 500 10 LEU A 77 -157.63 40.56 REMARK 500 11 LYS A 54 -133.48 -115.40 REMARK 500 11 ASP A 68 -45.61 -134.52 REMARK 500 11 TYR A 69 84.38 55.88 REMARK 500 11 ALA A 75 -0.42 -140.25 REMARK 500 11 LEU A 77 104.22 56.93 REMARK 500 11 TRP A 103 45.72 -87.88 REMARK 500 12 ASP A 9 -61.22 -99.26 REMARK 500 12 ASP A 68 -22.41 -148.00 REMARK 500 12 TYR A 69 -45.74 76.92 REMARK 500 12 TYR A 70 16.51 57.72 REMARK 500 12 LEU A 73 -46.02 -155.49 REMARK 500 13 LEU A 7 -48.32 76.42 REMARK 500 13 ASP A 72 -90.25 61.20 REMARK 500 13 LEU A 73 -80.08 62.36 REMARK 500 13 TRP A 103 56.64 -94.38 REMARK 500 13 ASP A 104 -51.13 -125.76 REMARK 500 13 PHE A 105 63.44 -118.84 REMARK 500 14 ALA A 8 -159.46 -146.61 REMARK 500 14 LYS A 54 -134.49 -112.18 REMARK 500 14 ASP A 68 107.93 62.34 REMARK 500 14 LEU A 73 -50.35 -151.78 REMARK 500 14 ASP A 88 -30.86 -146.84 REMARK 500 15 LEU A 7 -46.04 77.64 REMARK 500 15 GLN A 66 -85.17 -91.35 REMARK 500 15 TYR A 69 -78.97 66.85 REMARK 500 15 TYR A 70 26.47 45.56 REMARK 500 15 LEU A 73 -47.05 85.38 REMARK 500 15 ALA A 74 40.18 -88.27 REMARK 500 15 ASP A 88 -31.81 -130.08 REMARK 500 15 LYS A 92 131.01 -170.97 REMARK 500 16 LEU A 7 -50.92 78.44 REMARK 500 16 SER A 19 41.41 -102.73 REMARK 500 16 ASP A 68 -33.04 -135.97 REMARK 500 16 TYR A 69 87.40 56.27 REMARK 500 16 LEU A 73 -16.10 -143.07 REMARK 500 16 PHE A 105 47.94 -151.43 REMARK 500 17 ASP A 9 -61.23 -101.79 REMARK 500 17 ARG A 56 27.86 42.54 REMARK 500 17 ASP A 68 78.29 78.44 REMARK 500 17 TYR A 69 -83.88 -95.14 REMARK 500 17 ASP A 72 114.26 -165.26 REMARK 500 17 LEU A 73 6.22 -159.89 REMARK 500 18 LYS A 54 -42.25 -131.83 REMARK 500 18 ARG A 56 19.09 58.84 REMARK 500 18 GLN A 66 -78.02 -74.12 REMARK 500 18 ASP A 68 94.11 67.88 REMARK 500 18 ASP A 72 10.66 -148.12 REMARK 500 18 TRP A 103 48.01 -88.71 REMARK 500 19 LEU A 7 -34.39 75.44 REMARK 500 19 ASP A 9 -53.52 -129.68 REMARK 500 19 LEU A 73 -24.65 -150.17 REMARK 500 19 LYS A 92 135.01 -172.55 REMARK 500 20 LYS A 54 -97.26 -89.01 REMARK 500 20 ARG A 56 -58.26 74.90 REMARK 500 20 ARG A 58 -77.37 58.57 REMARK 500 20 LEU A 73 -57.03 -134.08 REMARK 500 20 TRP A 103 47.58 -86.75 REMARK 500 REMARK 500 REMARK: NULL
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1I1J RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF MELANOMA INHIBITORY ACTIVITY PROTEIN REMARK 900 RELATED ID: 1HJD RELATED DB: PDB REMARK 900 SOLUTION STRUCTURE OF MELANOMA INHIBITORY ACTIVITY PROTEIN
REMARK 999 REMARK 999 THE AUTHOR STATES THAT AN EXTRA MET IS AT THE REMARK 999 N-TERMINUS OF THE SEQUENCE THAT IS NOT PRESENT REMARK 999 IN THE NATIVE PROTEIN DUE TO E. COLI EXPRESSION. REMARK 999 THE RESIDUE NUMBERING IN THIS STRUCTURE IS +1 REMARK 999 RELATIVE TO 1I1J.
DBREF 1K0X A 2 108 UNP Q16674 MIA_HUMAN 25 131
SEQADV 1K0X MET A 1 UNP Q16674 SEE REMARK 999
SEQRES 1 A 108 MET GLY PRO MET PRO LYS LEU ALA ASP ARG LYS LEU CYS SEQRES 2 A 108 ALA ASP GLN GLU CYS SER HIS PRO ILE SER MET ALA VAL SEQRES 3 A 108 ALA LEU GLN ASP TYR MET ALA PRO ASP CYS ARG PHE LEU SEQRES 4 A 108 THR ILE HIS ARG GLY GLN VAL VAL TYR VAL PHE SER LYS SEQRES 5 A 108 LEU LYS GLY ARG GLY ARG LEU PHE TRP GLY GLY SER VAL SEQRES 6 A 108 GLN GLY ASP TYR TYR GLY ASP LEU ALA ALA ARG LEU GLY SEQRES 7 A 108 TYR PHE PRO SER SER ILE VAL ARG GLU ASP GLN THR LEU SEQRES 8 A 108 LYS PRO GLY LYS VAL ASP VAL LYS THR ASP LYS TRP ASP SEQRES 9 A 108 PHE TYR CYS GLN
SHEET 1 A 2 ARG A 10 CYS A 13 0 SHEET 2 A 2 VAL A 96 LYS A 99 -1 O VAL A 98 N LYS A 11 SHEET 1 B 5 GLY A 78 PRO A 81 0 SHEET 2 B 5 PHE A 60 GLN A 66 -1 N TRP A 61 O PHE A 80 SHEET 3 B 5 VAL A 46 LYS A 52 -1 N TYR A 48 O SER A 64 SHEET 4 B 5 SER A 23 ALA A 27 -1 N SER A 23 O VAL A 49 SHEET 5 B 5 VAL A 85 THR A 90 -1 O GLN A 89 N MET A 24
SSBOND 1 CYS A 13 CYS A 18 1555 1555 2.03 SSBOND 2 CYS A 36 CYS A 107 1555 1555 2.03
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000