1JXD - Header Asymmetric Unit

HEADER ELECTRON TRANSPORT 07-SEP-01 1JXD

TITLE SOLUTION STRUCTURE OF REDUCED CU(I) PLASTOCYANIN FROM TITLE 2 SYNECHOCYSTIS PCC6803

COMPND MOL_ID: 1; COMPND 2 MOLECULE: PLASTOCYANIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES

SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SYNECHOCYSTIS SP. PCC 6803; SOURCE 3 ORGANISM_TAXID: 1148; SOURCE 4 STRAIN: PCC6803; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BLR(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET3D

KEYWDS COPPER PROTEIN BETA BARREL ELECTRON TRANSFER, ELECTRON KEYWDS 2 TRANSPORT

EXPDTA SOLUTION NMR

AUTHOR I.BERTINI,D.A.BRYANT,S.CIURLI,A.DIKIY,C.O.FERNANDEZ, AUTHOR 2 C.LUCHINAT,N.SAFAROV,A.J.VILA,J.ZHAO

REVDAT 3 24-FEB-09 1JXD 1 VERSN REVDAT 2 20-MAR-02 1JXD 1 JRNL REVDAT 1 26-SEP-01 1JXD 0

JRNL AUTH I.BERTINI,D.A.BRYANT,S.CIURLI,A.DIKIY, JRNL AUTH 2 C.O.FERNANDEZ,C.LUCHINAT,N.SAFAROV,A.J.VILA,J.ZHAO JRNL TITL BACKBONE DYNAMICS OF PLASTOCYANIN IN BOTH JRNL TITL 2 OXIDATION STATES. SOLUTION STRUCTURE OF THE JRNL TITL 3 REDUCED FORM AND COMPARISON WITH THE OXIDIZED JRNL TITL 4 STATE. JRNL REF J.BIOL.CHEM. V. 276 47217 2001 JRNL REFN ISSN 0021-9258 JRNL PMID 11509552 JRNL DOI 10.1074/JBC.M100304200

REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH I.BERTINI,S.CIURLI,A.DIKIY,C.O.FERNANDEZ, REMARK 1 AUTH 2 C.LUCHINAT,N.SAFAROV,S.SHUMILIN,A.J.VILA REMARK 1 TITL THE FIRST SOLUTION STRUCTURE OF A PARAMAGNETIC REMARK 1 TITL 2 COPPER(II) PROTEIN: THE CASE OF OXIDIZED REMARK 1 TITL 3 PLASTOCYANIN FROM THE CYANOBACTERIUM SYNECHOCYSTIS REMARK 1 TITL 4 PCC6803 REMARK 1 REF J.AM.CHEM.SOC. V. 123 2405 2001 REMARK 1 REFN ISSN 0002-7863 REMARK 1 DOI 10.1021/JA0033685

REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.

REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : AMBER 5.0 REMARK 3 AUTHORS : KOLLMAN REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL

REMARK 4 REMARK 4 1JXD COMPLIES WITH FORMAT V. 3.15, 01-DEC-08

REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-SEP-01. REMARK 100 THE RCSB ID CODE IS RCSB014296.

REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 295 REMARK 210 PH : 5.2 REMARK 210 IONIC STRENGTH : 50 MM PHOSPHATE REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 3 MM PLASTOCYANIN U-15N REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D NOESY, HNHA REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ, 700 MHZ, 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 2.0, XEASY 1.3.13 REMARK 210 METHOD USED : ENERGY MINIMIZATION REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : NULL REMARK 210 CONFORMERS, NUMBER SUBMITTED : 1 REMARK 210 CONFORMERS, SELECTION CRITERIA : NULL REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: NULL

REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.

REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 11 -79.23 -169.99 REMARK 500 ASN A 34 -88.54 -132.27 REMARK 500 ALA A 65 80.54 -69.45 REMARK 500 REMARK 500 REMARK: NULL

REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 99 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 39 ND1 REMARK 620 2 CYS A 83 SG 120.9 REMARK 620 3 HIS A 86 ND1 108.7 108.9 REMARK 620 N 1 2

REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU A 99

REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1I0W RELATED DB: PDB REMARK 900 SOLUTION STRUCTURE OF OXIDIZED PARAMAGNETIC CU(II) REMARK 900 PLASTOCYANIN FROM SYNECHOCYSTIS PCC6803 - STRUCTURE ENSEMBLE REMARK 900 RELATED ID: 1I0Y RELATED DB: PDB REMARK 900 SOLUTION STRUCTURE OF OXIDIZED PARAMAGNETIC CU(II) REMARK 900 PLASTOCYANIN FROM SYNECHOCYSTIS PCC6803 - MINIMIZED AVERAGE REMARK 900 STRUCTURE REMARK 900 RELATED ID: 1JXF RELATED DB: PDB REMARK 900 SOLUTION STRUCTURE OF REDUCED CU(I) PLASTOCYANIN FROM REMARK 900 SYNECHOCYSTIS PCC6803

DBREF 1JXD A 1 98 UNP P21697 PLAS_SYNY3 29 126

SEQADV 1JXD ASP A 98 UNP P21697 GLU 126 ENGINEERED

SEQRES 1 A 98 ALA ASN ALA THR VAL LYS MET GLY SER ASP SER GLY ALA SEQRES 2 A 98 LEU VAL PHE GLU PRO SER THR VAL THR ILE LYS ALA GLY SEQRES 3 A 98 GLU GLU VAL LYS TRP VAL ASN ASN LYS LEU SER PRO HIS SEQRES 4 A 98 ASN ILE VAL PHE ALA ALA ASP GLY VAL ASP ALA ASP THR SEQRES 5 A 98 ALA ALA LYS LEU SER HIS LYS GLY LEU ALA PHE ALA ALA SEQRES 6 A 98 GLY GLU SER PHE THR SER THR PHE THR GLU PRO GLY THR SEQRES 7 A 98 TYR THR TYR TYR CYS GLU PRO HIS ARG GLY ALA GLY MET SEQRES 8 A 98 VAL GLY LYS VAL VAL VAL ASP

HET CU A 99 1

HETNAM CU COPPER (II) ION

FORMUL 2 CU CU 2+

HELIX 1 1 ASP A 49 SER A 57 1 9

SHEET 1 A 4 PHE A 16 GLU A 17 0 SHEET 2 A 4 ALA A 3 MET A 7 -1 N LYS A 6 O GLU A 17 SHEET 3 A 4 GLU A 28 ASN A 33 1 O VAL A 32 N MET A 7 SHEET 4 A 4 SER A 68 THR A 72 -1 O PHE A 69 N TRP A 31 SHEET 1 B 4 THR A 20 ILE A 23 0 SHEET 2 B 4 VAL A 92 VAL A 97 1 O VAL A 96 N VAL A 21 SHEET 3 B 4 GLY A 77 TYR A 82 -1 N TYR A 81 O GLY A 93 SHEET 4 B 4 VAL A 42 ALA A 44 -1 N VAL A 42 O TYR A 82

LINK CU CU A 99 ND1 HIS A 39 1555 1555 2.15 LINK CU CU A 99 SG CYS A 83 1555 1555 2.29 LINK CU CU A 99 ND1 HIS A 86 1555 1555 2.12

CISPEP 1 GLU A 17 PRO A 18 0 -9.62 CISPEP 2 SER A 37 PRO A 38 0 -2.25

SITE 1 AC1 4 HIS A 39 CYS A 83 HIS A 86 MET A 91

CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1

ORIGX1 1.000000 0.000000 0.000000 0.00000

ORIGX2 0.000000 1.000000 0.000000 0.00000

ORIGX3 0.000000 0.000000 1.000000 0.00000

SCALE1 1.000000 0.000000 0.000000 0.00000

SCALE2 0.000000 1.000000 0.000000 0.00000

SCALE3 0.000000 0.000000 1.000000 0.00000