10 20 30 40 50 60 70 80 1JN7 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER TRANSCRIPTION 23-JUL-01 1JN7
TITLE SOLUTION STRUCTURE OF A CCHH MUTANT OF THE NINTH CCHC ZINC TITLE 2 FINGER OF U-SHAPED
COMPND MOL_ID: 1; COMPND 2 MOLECULE: U-SHAPED TRANSCRIPTIONAL COFACTOR; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: NINTH ZINC-FINGER DOMAIN; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DROSOPHILA MELANOGASTER; SOURCE 3 ORGANISM_COMMON: FRUIT FLY; SOURCE 4 ORGANISM_TAXID: 7227; SOURCE 5 GENE: U-SHAPED; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PGEX-2T
KEYWDS ZINC FINGER, PROTEIN-PROTEIN INTERACTION, TRANSCRIPTION
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR K.KOWALSKI,J.P.MACKAY
REVDAT 2 24-FEB-09 1JN7 1 VERSN REVDAT 1 25-SEP-02 1JN7 0
JRNL AUTH K.KOWALSKI,C.K.LIEW,J.M.MATTHEWS,D.A.GELL, JRNL AUTH 2 M.CROSSLEY,J.P.MACKAY JRNL TITL CHARACTERIZATION OF THE CONSERVED INTERACTION JRNL TITL 2 BETWEEN GATA AND FOG FAMILY PROTEINS JRNL REF J.BIOL.CHEM. V. 277 35720 2002 JRNL REFN ISSN 0021-9258 JRNL PMID 12110675 JRNL DOI 10.1074/JBC.M204663200
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 0.5 REMARK 3 AUTHORS : BRUNGER ET AL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1JN7 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-JUL-01. REMARK 100 THE RCSB ID CODE IS RCSB013962.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 293; 293 REMARK 210 PH : 5.0; 5.0 REMARK 210 IONIC STRENGTH : 1.5MM ZNSO4; 0.75MM ZNSO4 REMARK 210 PRESSURE : AMBIENT; AMBIENT REMARK 210 SAMPLE CONTENTS : 1MM PROTEIN; 1.5MM ZNSO4; REMARK 210 1.5MM TCEP; 95% H2O, 5% D2O; REMARK 210 0.5MM PROTEIN U-15N; 0.75MM REMARK 210 ZNSO4; 0.75MM TCEP; 95% H2O, REMARK 210 5% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D NOESY, DQF-COSY, E-COSY, REMARK 210 HNHA REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : DRX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 2.6, DYANA 1.5 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 500 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED USING STANDARD 2D REMARK 210 HOMONUCLEAR TECHNIQUES
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 2 -169.40 -170.42 REMARK 500 1 ALA A 4 -70.41 -175.08 REMARK 500 1 GLU A 5 64.85 165.51 REMARK 500 1 MET A 7 171.99 64.26 REMARK 500 1 LYS A 8 -76.64 -147.25 REMARK 500 1 HIS A 32 39.17 -97.34 REMARK 500 1 LYS A 33 74.10 -177.74 REMARK 500 1 LYS A 35 56.49 -176.77 REMARK 500 2 ALA A 4 100.11 58.96 REMARK 500 2 GLU A 5 64.85 165.51 REMARK 500 2 MET A 7 79.98 -173.83 REMARK 500 2 LYS A 8 -85.23 -151.52 REMARK 500 2 LYS A 9 45.88 -147.00 REMARK 500 2 THR A 13 -34.87 -134.38 REMARK 500 2 HIS A 32 42.73 -96.12 REMARK 500 2 LYS A 33 44.34 -172.51 REMARK 500 2 ASN A 34 36.60 -174.24 REMARK 500 2 LYS A 35 84.46 59.92 REMARK 500 3 SER A 2 33.70 -166.65 REMARK 500 3 GLU A 5 64.96 165.45 REMARK 500 3 MET A 7 89.36 60.35 REMARK 500 3 THR A 13 -35.14 -134.42 REMARK 500 3 HIS A 32 42.43 -95.77 REMARK 500 3 LYS A 33 44.31 -168.89 REMARK 500 3 ASN A 34 36.94 -175.00 REMARK 500 3 LYS A 35 87.62 -174.97 REMARK 500 4 SER A 2 85.79 60.37 REMARK 500 4 ALA A 3 40.01 -109.69 REMARK 500 4 GLU A 5 64.80 165.48 REMARK 500 4 VAL A 6 57.08 -92.52 REMARK 500 4 MET A 7 82.13 -162.40 REMARK 500 4 LYS A 8 87.22 -178.48 REMARK 500 4 THR A 13 -34.96 -134.35 REMARK 500 4 HIS A 32 51.28 -113.16 REMARK 500 4 LYS A 33 54.76 -144.96 REMARK 500 5 ALA A 3 95.35 59.97 REMARK 500 5 GLU A 5 64.96 165.49 REMARK 500 5 MET A 7 83.96 61.62 REMARK 500 5 LYS A 8 -38.17 -179.15 REMARK 500 5 THR A 13 -35.07 -134.38 REMARK 500 5 HIS A 32 43.84 -98.06 REMARK 500 5 LYS A 33 44.60 -145.25 REMARK 500 5 ASN A 34 39.56 -160.52 REMARK 500 5 LYS A 35 153.31 61.31 REMARK 500 6 SER A 2 171.84 58.60 REMARK 500 6 ALA A 4 70.72 60.61 REMARK 500 6 GLU A 5 64.90 165.40 REMARK 500 6 MET A 7 62.44 -162.08 REMARK 500 6 THR A 13 -34.99 -134.47 REMARK 500 6 HIS A 32 39.68 -97.02 REMARK 500 6 LYS A 33 44.24 -174.84 REMARK 500 6 LYS A 35 86.09 -160.98 REMARK 500 7 SER A 2 156.99 60.69 REMARK 500 7 ALA A 4 61.34 -168.77 REMARK 500 7 GLU A 5 64.93 165.51 REMARK 500 7 MET A 7 65.88 66.96 REMARK 500 7 THR A 13 -35.10 -134.51 REMARK 500 7 HIS A 32 42.67 -95.81 REMARK 500 7 LYS A 33 44.33 -174.20 REMARK 500 7 ASN A 34 42.61 -102.61 REMARK 500 8 ALA A 3 112.90 -175.05 REMARK 500 8 ALA A 4 -46.43 -153.38 REMARK 500 8 GLU A 5 64.94 165.51 REMARK 500 8 MET A 7 111.49 62.43 REMARK 500 8 LYS A 8 -83.57 -165.23 REMARK 500 8 LYS A 9 45.73 -149.72 REMARK 500 8 LYS A 35 90.62 -176.59 REMARK 500 9 SER A 2 131.97 -176.57 REMARK 500 9 ALA A 3 76.10 -101.02 REMARK 500 9 ALA A 4 -80.72 63.45 REMARK 500 9 GLU A 5 64.86 165.39 REMARK 500 9 THR A 13 -35.06 -134.38 REMARK 500 9 LYS A 35 89.11 -174.51 REMARK 500 10 ALA A 4 -75.27 -113.94 REMARK 500 10 GLU A 5 64.88 165.49 REMARK 500 10 LYS A 8 84.87 -179.22 REMARK 500 10 THR A 13 -35.01 -134.43 REMARK 500 10 HIS A 32 45.39 -100.44 REMARK 500 10 LYS A 33 44.16 -144.89 REMARK 500 10 ASN A 34 36.31 -174.28 REMARK 500 10 LYS A 35 87.75 -177.44 REMARK 500 11 SER A 2 84.03 -150.47 REMARK 500 11 GLU A 5 64.94 165.51 REMARK 500 11 MET A 7 179.92 64.64 REMARK 500 11 LYS A 8 -69.25 77.21 REMARK 500 11 LYS A 9 56.03 -156.92 REMARK 500 11 THR A 13 -35.10 -134.33 REMARK 500 11 HIS A 32 42.73 -95.36 REMARK 500 11 LYS A 33 44.47 -165.35 REMARK 500 11 ASN A 34 33.71 -167.97 REMARK 500 12 GLU A 5 64.91 165.43 REMARK 500 12 LYS A 9 49.25 70.45 REMARK 500 13 ALA A 3 92.32 60.63 REMARK 500 13 GLU A 5 64.94 165.59 REMARK 500 13 LYS A 8 -78.77 -96.55 REMARK 500 13 LYS A 9 50.58 -152.07 REMARK 500 13 THR A 13 -35.02 -134.40 REMARK 500 13 ASN A 34 72.11 52.09 REMARK 500 13 LYS A 35 96.71 60.45 REMARK 500 14 ALA A 3 98.77 60.37 REMARK 500 14 GLU A 5 65.00 165.45 REMARK 500 14 VAL A 6 108.77 -58.08 REMARK 500 14 MET A 7 145.98 -176.68 REMARK 500 14 LYS A 8 -175.00 -54.97 REMARK 500 14 HIS A 32 53.05 -115.85 REMARK 500 15 ALA A 3 113.46 61.15 REMARK 500 15 ALA A 4 -169.85 61.41 REMARK 500 15 GLU A 5 65.04 165.48 REMARK 500 15 THR A 13 -35.02 -134.41 REMARK 500 15 LYS A 33 72.02 174.78 REMARK 500 16 SER A 2 35.63 -98.33 REMARK 500 16 ALA A 4 -67.64 68.67 REMARK 500 16 GLU A 5 64.97 165.55 REMARK 500 16 MET A 7 123.02 66.13 REMARK 500 16 LYS A 9 62.05 -156.27 REMARK 500 16 THR A 13 -35.02 -134.28 REMARK 500 16 HIS A 32 49.50 -109.43 REMARK 500 16 LYS A 33 44.00 -155.15 REMARK 500 16 ASN A 34 77.98 -166.71 REMARK 500 16 LYS A 35 78.94 60.66 REMARK 500 17 SER A 2 32.10 -98.95 REMARK 500 17 ALA A 3 36.81 -174.37 REMARK 500 17 ALA A 4 165.02 60.51 REMARK 500 17 GLU A 5 64.88 165.40 REMARK 500 17 MET A 7 142.59 -176.52 REMARK 500 17 LYS A 8 -63.55 -150.61 REMARK 500 17 LYS A 9 65.02 -168.95 REMARK 500 17 THR A 13 -34.91 -134.43 REMARK 500 17 HIS A 32 42.41 -95.76 REMARK 500 17 LYS A 33 44.44 -171.58 REMARK 500 17 ASN A 34 49.01 -169.38 REMARK 500 17 LYS A 35 80.15 62.47 REMARK 500 18 ALA A 3 33.69 -166.01 REMARK 500 18 ALA A 4 156.02 60.86 REMARK 500 18 GLU A 5 64.97 165.50 REMARK 500 18 LYS A 9 67.51 -167.90 REMARK 500 18 THR A 13 -35.05 -134.38 REMARK 500 18 HIS A 32 45.27 -100.35 REMARK 500 18 LYS A 35 75.90 60.66 REMARK 500 19 SER A 2 162.07 60.56 REMARK 500 19 ALA A 3 40.59 -97.05 REMARK 500 19 ALA A 4 -78.64 64.49 REMARK 500 19 GLU A 5 64.97 165.51 REMARK 500 19 VAL A 6 39.90 -94.89 REMARK 500 19 MET A 7 121.12 -176.50 REMARK 500 19 LYS A 8 -46.76 -151.62 REMARK 500 19 LYS A 9 44.25 -170.95 REMARK 500 19 THR A 13 -35.09 -134.31 REMARK 500 19 HIS A 32 50.41 -111.84 REMARK 500 19 LYS A 33 43.69 -161.49 REMARK 500 19 ASN A 34 33.88 -168.55 REMARK 500 20 ALA A 3 36.27 -165.23 REMARK 500 20 GLU A 5 64.92 165.52 REMARK 500 20 VAL A 6 38.44 -95.46 REMARK 500 20 LYS A 8 -38.05 -176.35 REMARK 500 20 THR A 13 -35.12 -134.33 REMARK 500 20 HIS A 32 48.06 -105.35 REMARK 500 20 LYS A 35 55.07 -171.69 REMARK 500 REMARK 500 REMARK: NULL
REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 1 ZN A 37 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 32 NE2 REMARK 620 2 CYS A 14 SG 109.9 REMARK 620 3 CYS A 11 SG 109.7 113.3 REMARK 620 4 HIS A 27 NE2 97.7 112.3 112.8 REMARK 620 N 1 2 3
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 37
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1FU9 RELATED DB: PDB REMARK 900 1FU9 IS THE SOLUTION STRUCTURE OF THE NINTH ZINC-FINGER REMARK 900 DOMAIN OF THE U-SHAPED TRANSCRIPTION FACTOR REMARK 900 RELATED ID: 1FV5 RELATED DB: PDB REMARK 900 1FV5 IS THE SOLUTION STRUCTURE OF THE FIRST ZINC FINGER REMARK 900 FROM THE DROSOPHILA U-SHAPED TRANSCRIPTION FACTOR
DBREF 1JN7 A 3 36 UNP Q9VPQ6 USH_DROME 587 620
SEQADV 1JN7 GLY A 1 UNP Q9VPQ6 CLONING ARTIFACT SEQADV 1JN7 SER A 2 UNP Q9VPQ6 CLONING ARTIFACT SEQADV 1JN7 HIS A 32 UNP Q9VPQ6 CYS 616 ENGINEERED
SEQRES 1 A 36 GLY SER ALA ALA GLU VAL MET LYS LYS TYR CYS SER THR SEQRES 2 A 36 CYS ASP ILE SER PHE ASN TYR VAL LYS THR TYR LEU ALA SEQRES 3 A 36 HIS LYS GLN PHE TYR HIS LYS ASN LYS PRO
HET ZN A 37 1
HETNAM ZN ZINC ION
FORMUL 2 ZN ZN 2+
HELIX 1 1 TYR A 20 TYR A 31 1 12
SHEET 1 A 2 TYR A 10 CYS A 11 0 SHEET 2 A 2 ILE A 16 SER A 17 -1 O ILE A 16 N CYS A 11
LINK ZN ZN A 37 NE2 HIS A 32 1555 1555 1.99 LINK ZN ZN A 37 SG CYS A 14 1555 1555 2.29 LINK ZN ZN A 37 SG CYS A 11 1555 1555 2.30 LINK ZN ZN A 37 NE2 HIS A 27 1555 1555 1.99
SITE 1 AC1 4 CYS A 11 CYS A 14 HIS A 27 HIS A 32
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000