10 20 30 40 50 60 70 80 1JHB - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER ELECTRON TRANSPORT 17-FEB-98 1JHB
TITLE HUMAN GLUTAREDOXIN IN FULLY REDUCED FORM, NMR, 20 STRUCTURES
COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUTAREDOXIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR: PET
KEYWDS GLUTAREDOXIN, OXIDOREDUCTASE, NMR, ELECTRON TRANSPORT
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR C.SUN,J.H.BUSHWELLER
REVDAT 2 24-FEB-09 1JHB 1 VERSN REVDAT 1 26-AUG-98 1JHB 0
JRNL AUTH C.SUN,M.J.BERARDI,J.H.BUSHWELLER JRNL TITL THE NMR SOLUTION STRUCTURE OF HUMAN GLUTAREDOXIN JRNL TITL 2 IN THE FULLY REDUCED FORM. JRNL REF J.MOL.BIOL. V. 280 687 1998 JRNL REFN ISSN 0022-2836 JRNL PMID 9677297 JRNL DOI 10.1006/JMBI.1998.1913
REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH C.SUN,A.HOLMGREN,J.H.BUSHWELLER REMARK 1 TITL COMPLETE 1H, 13C, AND 15N NMR RESONANCE REMARK 1 TITL 2 ASSIGNMENTS AND SECONDARY STRUCTURE OF HUMAN REMARK 1 TITL 3 GLUTAREDOXIN IN THE FULLY REDUCED FORM REMARK 1 REF PROTEIN SCI. V. 6 383 1997 REMARK 1 REFN ISSN 0961-8368
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : OPAL REMARK 3 AUTHORS : LUGINBUHL,GUNTERT,BILLETER,WUTHRICH REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REFINEMENT DETAILS CAN BE FOUND IN REMARK 3 THE JRNL CITATION ABOVE.
REMARK 4 REMARK 4 1JHB COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 303 REMARK 210 PH : 6.0 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : NULL REMARK 210 SAMPLE CONTENTS : NULL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : NOESY, HCCH-TOCSY, HACAHB, REMARK 210 HNHB, HSQC, CT-HSQC, HNCA, REMARK 210 HN(CO)CA, HNCACB, HN (CO)CACB, REMARK 210 HN(CA)HA, HNCO, (HB)CB(CGCD) REMARK 210 HD, HB(CBCGCD)HD REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ REMARK 210 SPECTROMETER MODEL : UNITYPLUS 500 REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : DYANA REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 50 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : LEAST RESTRAINT VIOLATION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-20 REMARK 465 RES C SSSEQI REMARK 465 MET A 1
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 9 ARG A 98 CD - NE - CZ ANGL. DEV. = 8.6 DEGREES REMARK 500 9 ARG A 98 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 9 ARG A 98 NE - CZ - NH2 ANGL. DEV. = -3.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 VAL A 15 79.17 -103.68 REMARK 500 1 THR A 51 20.74 -149.29 REMARK 500 1 ASN A 52 -148.64 -156.60 REMARK 500 1 LYS A 77 16.69 46.43 REMARK 500 1 ALA A 104 -74.52 -84.31 REMARK 500 2 GLN A 3 34.54 -66.67 REMARK 500 2 GLU A 4 -57.41 -163.42 REMARK 500 2 THR A 22 -106.17 -133.35 REMARK 500 2 CYS A 23 115.06 33.83 REMARK 500 2 THR A 51 -43.67 -150.97 REMARK 500 2 ASN A 52 -160.30 -170.53 REMARK 500 2 THR A 65 -71.67 -116.09 REMARK 500 2 LYS A 77 22.10 46.67 REMARK 500 2 CYS A 83 -55.70 -132.43 REMARK 500 2 ALA A 104 -70.47 -75.74 REMARK 500 3 GLN A 3 -91.42 34.22 REMARK 500 3 THR A 22 31.45 -75.58 REMARK 500 3 ASN A 52 -106.66 -78.63 REMARK 500 3 HIS A 53 93.12 -163.60 REMARK 500 3 LYS A 77 21.14 47.26 REMARK 500 4 GLN A 3 58.70 34.74 REMARK 500 4 GLU A 4 -34.12 61.79 REMARK 500 4 THR A 65 -72.22 -127.22 REMARK 500 4 LYS A 77 27.73 46.21 REMARK 500 4 ALA A 104 -72.49 -91.34 REMARK 500 5 GLN A 3 46.78 -66.95 REMARK 500 5 GLU A 4 -56.41 -163.53 REMARK 500 5 PRO A 12 79.18 -67.50 REMARK 500 5 VAL A 15 79.39 -113.07 REMARK 500 5 ALA A 50 53.14 -69.04 REMARK 500 5 HIS A 53 79.82 67.62 REMARK 500 5 LYS A 77 15.28 46.48 REMARK 500 6 GLN A 3 158.06 -48.64 REMARK 500 6 CYS A 8 38.60 -81.40 REMARK 500 6 LYS A 9 -47.79 -130.91 REMARK 500 6 VAL A 15 79.58 -119.88 REMARK 500 6 THR A 51 -27.19 -172.03 REMARK 500 6 HIS A 53 82.32 124.63 REMARK 500 6 LYS A 77 21.37 47.31 REMARK 500 6 ALA A 104 -74.86 -84.93 REMARK 500 7 VAL A 6 -60.26 -90.51 REMARK 500 7 THR A 51 -106.41 -132.78 REMARK 500 7 LYS A 77 19.53 46.13 REMARK 500 7 ALA A 104 -75.65 -114.46 REMARK 500 8 GLN A 3 48.30 -85.45 REMARK 500 8 GLU A 4 -43.13 -163.45 REMARK 500 8 THR A 65 -76.03 -125.06 REMARK 500 9 GLU A 4 -55.88 -163.10 REMARK 500 9 ASN A 52 -163.37 57.76 REMARK 500 9 LYS A 77 -9.18 46.55 REMARK 500 9 CYS A 83 -62.15 -128.45 REMARK 500 10 GLN A 3 32.98 -53.67 REMARK 500 10 GLU A 4 -58.04 -163.44 REMARK 500 10 PRO A 12 26.08 -73.83 REMARK 500 10 THR A 51 -39.94 -148.80 REMARK 500 10 HIS A 53 80.92 71.33 REMARK 500 10 LYS A 77 9.41 46.58 REMARK 500 11 GLN A 3 -62.86 38.59 REMARK 500 11 GLU A 4 -50.69 -163.31 REMARK 500 11 THR A 51 -15.57 -160.08 REMARK 500 11 HIS A 53 105.49 127.73 REMARK 500 11 LYS A 77 -2.51 46.22 REMARK 500 11 ALA A 104 -74.17 -111.86 REMARK 500 12 GLN A 3 -13.75 56.42 REMARK 500 12 GLU A 4 -38.90 -163.94 REMARK 500 12 THR A 22 -99.99 -118.67 REMARK 500 12 CYS A 23 100.94 32.48 REMARK 500 12 ASN A 52 -6.46 54.57 REMARK 500 12 HIS A 53 17.14 -68.02 REMARK 500 12 THR A 65 -75.89 -97.49 REMARK 500 12 LYS A 77 24.29 46.61 REMARK 500 12 CYS A 83 -64.60 -121.71 REMARK 500 13 GLN A 3 -99.40 -67.40 REMARK 500 13 VAL A 6 -69.91 -109.79 REMARK 500 13 THR A 51 -40.13 -157.61 REMARK 500 13 HIS A 53 103.57 144.24 REMARK 500 13 LYS A 77 20.39 46.06 REMARK 500 14 GLN A 3 -173.31 75.22 REMARK 500 14 GLU A 4 -10.04 -48.76 REMARK 500 14 PRO A 21 28.77 -75.06 REMARK 500 14 THR A 22 29.48 -147.23 REMARK 500 14 PRO A 37 42.23 -78.38 REMARK 500 14 ASN A 52 -93.64 -143.48 REMARK 500 14 HIS A 53 57.28 -160.22 REMARK 500 14 LYS A 77 14.32 46.65 REMARK 500 14 ALA A 104 -78.21 -101.21 REMARK 500 15 GLN A 3 165.27 57.40 REMARK 500 15 THR A 22 48.48 -81.89 REMARK 500 15 THR A 51 -70.12 -149.47 REMARK 500 15 ASN A 52 -86.34 -34.10 REMARK 500 15 HIS A 53 99.91 -164.18 REMARK 500 15 THR A 65 -62.56 -120.79 REMARK 500 15 LYS A 77 3.11 46.52 REMARK 500 15 ALA A 104 -76.41 -134.85 REMARK 500 16 GLU A 4 -58.63 -163.04 REMARK 500 16 ASN A 52 -0.54 -146.62 REMARK 500 16 HIS A 53 88.86 69.90 REMARK 500 16 THR A 65 -65.19 -101.10 REMARK 500 16 LYS A 77 13.09 46.72 REMARK 500 16 ALA A 104 -73.04 -116.28 REMARK 500 17 GLN A 3 -56.60 -136.98 REMARK 500 17 ALA A 50 68.79 -63.62 REMARK 500 17 THR A 51 -4.54 55.99 REMARK 500 17 HIS A 53 87.58 78.25 REMARK 500 17 LYS A 77 17.30 46.14 REMARK 500 17 ALA A 104 -70.11 -138.41 REMARK 500 18 GLU A 4 -60.76 -163.07 REMARK 500 18 GLN A 40 100.59 -39.96 REMARK 500 18 THR A 51 -16.07 68.36 REMARK 500 18 THR A 65 -65.92 -121.34 REMARK 500 18 ALA A 104 -74.52 -89.14 REMARK 500 19 GLN A 3 28.56 -75.92 REMARK 500 19 GLU A 4 -56.93 -163.03 REMARK 500 19 THR A 51 -55.11 -137.14 REMARK 500 19 ASN A 52 -161.33 -165.76 REMARK 500 19 HIS A 53 -3.39 62.33 REMARK 500 19 SER A 84 -76.17 61.46 REMARK 500 19 ALA A 104 -70.46 -83.96 REMARK 500 20 GLU A 4 -54.30 -163.78 REMARK 500 20 THR A 22 -106.63 -138.20 REMARK 500 20 CYS A 23 104.21 32.65 REMARK 500 20 THR A 51 -77.83 -122.70 REMARK 500 20 ASN A 52 -163.12 -162.77 REMARK 500 20 THR A 65 -76.23 -125.84 REMARK 500 20 LYS A 77 -12.51 46.83 REMARK 500 20 CYS A 83 -64.15 -126.23 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 1 ARG A 72 0.09 SIDE_CHAIN REMARK 500 2 ARG A 27 0.12 SIDE_CHAIN REMARK 500 2 ARG A 28 0.09 SIDE_CHAIN REMARK 500 2 ARG A 72 0.07 SIDE_CHAIN REMARK 500 3 TYR A 60 0.08 SIDE_CHAIN REMARK 500 3 ARG A 98 0.08 SIDE_CHAIN REMARK 500 4 ARG A 72 0.12 SIDE_CHAIN REMARK 500 6 TYR A 60 0.11 SIDE_CHAIN REMARK 500 6 ARG A 98 0.09 SIDE_CHAIN REMARK 500 8 TYR A 25 0.07 SIDE_CHAIN REMARK 500 8 ARG A 28 0.11 SIDE_CHAIN REMARK 500 8 ARG A 68 0.08 SIDE_CHAIN REMARK 500 9 ARG A 27 0.12 SIDE_CHAIN REMARK 500 9 ARG A 68 0.10 SIDE_CHAIN REMARK 500 10 ARG A 27 0.11 SIDE_CHAIN REMARK 500 11 ARG A 68 0.10 SIDE_CHAIN REMARK 500 11 ARG A 98 0.10 SIDE_CHAIN REMARK 500 12 ARG A 98 0.09 SIDE_CHAIN REMARK 500 13 TYR A 25 0.12 SIDE_CHAIN REMARK 500 13 TYR A 60 0.08 SIDE_CHAIN REMARK 500 15 ARG A 72 0.08 SIDE_CHAIN REMARK 500 16 TYR A 25 0.08 SIDE_CHAIN REMARK 500 17 ARG A 28 0.09 SIDE_CHAIN REMARK 500 17 ARG A 68 0.09 SIDE_CHAIN REMARK 500 19 ARG A 68 0.10 SIDE_CHAIN REMARK 500 20 ARG A 28 0.09 SIDE_CHAIN REMARK 500 20 ARG A 98 0.10 SIDE_CHAIN REMARK 500 REMARK 500 REMARK: NULL
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AVE REMARK 800 EVIDENCE_CODE: UNKNOWN REMARK 800 SITE_DESCRIPTION: ACTIVE SITE.
DBREF 1JHB A 2 106 UNP P35754 GLRX1_HUMAN 1 105
SEQRES 1 A 106 MET ALA GLN GLU PHE VAL ASN CYS LYS ILE GLN PRO GLY SEQRES 2 A 106 LYS VAL VAL VAL PHE ILE LYS PRO THR CYS PRO TYR CYS SEQRES 3 A 106 ARG ARG ALA GLN GLU ILE LEU SER GLN LEU PRO ILE LYS SEQRES 4 A 106 GLN GLY LEU LEU GLU PHE VAL ASP ILE THR ALA THR ASN SEQRES 5 A 106 HIS THR ASN GLU ILE GLN ASP TYR LEU GLN GLN LEU THR SEQRES 6 A 106 GLY ALA ARG THR VAL PRO ARG VAL PHE ILE GLY LYS ASP SEQRES 7 A 106 CYS ILE GLY GLY CYS SER ASP LEU VAL SER LEU GLN GLN SEQRES 8 A 106 SER GLY GLU LEU LEU THR ARG LEU LYS GLN ILE GLY ALA SEQRES 9 A 106 LEU GLN
HELIX 1 H1 GLU A 4 LYS A 9 1 6 HELIX 2 H2 PRO A 24 SER A 34 1 11 HELIX 3 H3 THR A 54 THR A 65 1 12 HELIX 4 H4 SER A 84 GLN A 91 1 8 HELIX 5 H5 GLU A 94 LYS A 100 1 7
SHEET 1 S1 4 LEU A 43 ASP A 47 0 SHEET 2 S1 4 VAL A 15 ILE A 19 1 N VAL A 17 O GLU A 44 SHEET 3 S1 4 ARG A 72 ILE A 75 -1 N PHE A 74 O VAL A 16 SHEET 4 S1 4 ASP A 78 GLY A 81 -1 N ILE A 80 O VAL A 73
HYDBND O CYS A 23 H N ARG A 27 1555 1555
CISPEP 1 VAL A 70 PRO A 71 1 -3.52 CISPEP 2 VAL A 70 PRO A 71 2 -5.29 CISPEP 3 VAL A 70 PRO A 71 3 -10.00 CISPEP 4 VAL A 70 PRO A 71 4 -6.96 CISPEP 5 VAL A 70 PRO A 71 5 -1.21 CISPEP 6 VAL A 70 PRO A 71 6 -10.95 CISPEP 7 VAL A 70 PRO A 71 7 3.46 CISPEP 8 VAL A 70 PRO A 71 8 -11.91 CISPEP 9 VAL A 70 PRO A 71 9 -4.64 CISPEP 10 VAL A 70 PRO A 71 10 -9.01 CISPEP 11 VAL A 70 PRO A 71 11 -4.19 CISPEP 12 VAL A 70 PRO A 71 12 -7.29 CISPEP 13 VAL A 70 PRO A 71 13 -13.90 CISPEP 14 VAL A 70 PRO A 71 14 -8.35 CISPEP 15 VAL A 70 PRO A 71 15 -4.55 CISPEP 16 VAL A 70 PRO A 71 16 -7.89 CISPEP 17 VAL A 70 PRO A 71 17 -15.44 CISPEP 18 VAL A 70 PRO A 71 18 -5.15 CISPEP 19 VAL A 70 PRO A 71 19 -15.57 CISPEP 20 VAL A 70 PRO A 71 20 -4.99
SITE 1 AVE 2 CYS A 23 CYS A 26
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000