1JD1 - Header Asymmetric Unit

HEADER TRANSLATION INHIBITOR 12-JUN-01 1JD1

TITLE CRYSTAL STRUCTURE OF YEO7_YEAST

COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL 13.9 KDA PROTEIN IN FCY2-PET117 COMPND 3 INTERGENIC REGION; COMPND 4 CHAIN: A, B, C, D, E, F; COMPND 5 ENGINEERED: YES

SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 GENE: YERO57C; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PET28A

KEYWDS TRANSLATION INHIBITOR, STRUCTURAL GENOMICS, PSI, PROTEIN KEYWDS 2 STRUCTURE INITIATIVE, NEW YORK SGX RESEARCH CENTER FOR KEYWDS 3 STRUCTURAL GENOMICS, NYSGXRC

EXPDTA X-RAY DIFFRACTION

AUTHOR A.M.DEACONESCU,S.K.BURLEY,NEW YORK SGX RESEARCH CENTER FOR AUTHOR 2 STRUCTURAL GENOMICS (NYSGXRC)

REVDAT 6 24-FEB-09 1JD1 1 VERSN REVDAT 5 23-AUG-06 1JD1 1 SOURCE REMARK REVDAT 4 05-APR-05 1JD1 1 JRNL REVDAT 3 25-JAN-05 1JD1 1 AUTHOR KEYWDS REMARK REVDAT 2 30-SEP-03 1JD1 1 DBREF REVDAT 1 04-JUL-01 1JD1 0

JRNL AUTH A.M.DEACONESCU,A.ROLL-MECAK,J.B.BONANNO, JRNL AUTH 2 S.E.GERCHMAN,H.KYCIA,F.W.STUDIER,S.K.BURLEY JRNL TITL X-RAY STRUCTURE OF SACCHAROMYCES CEREVISIAE JRNL TITL 2 HOMOLOGOUS MITOCHONDRIAL MATRIX FACTOR 1 (HMF1). JRNL REF PROTEINS V. 48 431 2002 JRNL REFN ISSN 0887-3585 JRNL PMID 12112709 JRNL DOI 10.1002/PROT.10151

REMARK 1

REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS.

REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 156294 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.207 REMARK 3 FREE R VALUE : 0.238 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.71 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.70 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2410 REMARK 3 BIN FREE R VALUE : 0.2710 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 234 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5483 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 634 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 20.16 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.011 REMARK 3 BOND ANGLES (DEGREES) : 1.40 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : ANISOTROPIC REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL

REMARK 4 REMARK 4 1JD1 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08

REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-JUN-01. REMARK 100 THE RCSB ID CODE IS RCSB013639.

REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-AUG-00 REMARK 200 TEMPERATURE (KELVIN) : 170 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X9B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98091, 0.99104 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 86368 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.03500 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 30.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.74 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.7 REMARK 200 DATA REDUNDANCY IN SHELL : 4.00 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.30700 REMARK 200 <I/SIGMA(I)> FOR SHELL : 4.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: MLPHARE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL

REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.27 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.42 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL

REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 32.05000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL

REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A TRIMER.

REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5870 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13060 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -42.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5610 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13290 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -43.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000

REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 VAL A 2 REMARK 465 ASP A 129 REMARK 465 MET B 1 REMARK 465 VAL B 2 REMARK 465 ARG B 128 REMARK 465 ASP B 129 REMARK 465 MET C 1 REMARK 465 VAL C 2 REMARK 465 ASP C 129 REMARK 465 MET D 1 REMARK 465 VAL D 2 REMARK 465 THR D 3 REMARK 465 ARG D 128 REMARK 465 ASP D 129 REMARK 465 MET E 1 REMARK 465 VAL E 2 REMARK 465 THR E 3 REMARK 465 THR E 4 REMARK 465 ARG E 128 REMARK 465 ASP E 129 REMARK 465 MET F 1 REMARK 465 VAL F 2 REMARK 465 THR F 3 REMARK 465 ASP F 129

REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS(M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ILE A 9 CG1 CG2 CD1 REMARK 470 ASN A 28 CG OD1 ND2 REMARK 470 ASP A 41 CG OD1 OD2 REMARK 470 LYS A 43 CG CD CE NZ REMARK 470 GLU A 46 CG CD OE1 OE2 REMARK 470 LYS A 61 CG CD CE NZ REMARK 470 GLU A 65 CG CD OE1 OE2 REMARK 470 GLU A 89 CG CD OE1 OE2 REMARK 470 ARG A 128 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 46 CG CD OE1 OE2 REMARK 470 THR C 3 OG1 CG2 REMARK 470 ASN C 99 CG OD1 ND2 REMARK 470 ARG C 128 CG CD NE CZ NH1 NH2 REMARK 470 ILE D 9 CG1 CG2 CD1 REMARK 470 ASP D 41 CG OD1 OD2 REMARK 470 LYS D 43 CG CD CE NZ REMARK 470 GLU D 46 CG CD OE1 OE2 REMARK 470 GLN D 58 CG CD OE1 NE2 REMARK 470 LYS D 61 CG CD CE NZ REMARK 470 GLU D 65 CG CD OE1 OE2 REMARK 470 ASP D 72 CG OD1 OD2 REMARK 470 LEU E 5 CG CD1 CD2 REMARK 470 SER E 12 OG REMARK 470 ASN E 28 CG OD1 ND2 REMARK 470 THR E 39 OG1 CG2 REMARK 470 ASP E 41 CG OD1 OD2 REMARK 470 ASN E 42 CG OD1 ND2 REMARK 470 LYS E 43 CG CD CE NZ REMARK 470 LEU E 44 CG CD1 CD2 REMARK 470 GLU E 46 CG CD OE1 OE2 REMARK 470 VAL E 56 CG1 CG2 REMARK 470 GLU E 65 CG CD OE1 OE2 REMARK 470 ASP E 72 CG OD1 OD2 REMARK 470 ILE E 79 CD1 REMARK 470 PHE E 87 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ASN E 99 CG OD1 ND2 REMARK 470 THR E 100 OG1 CG2 REMARK 470 LYS E 102 CG CD CE NZ REMARK 470 GLU F 11 CG CD OE1 OE2 REMARK 470 SER F 12 OG REMARK 470 ASP F 41 CG OD1 OD2 REMARK 470 LYS F 43 CG CD CE NZ REMARK 470 GLU F 46 CG CD OE1 OE2 REMARK 470 GLU F 65 CG CD OE1 OE2 REMARK 470 ASP F 72 CG OD1 OD2 REMARK 470 ASP F 83 CG OD1 OD2 REMARK 470 ARG F 128 CG CD NE CZ NH1 NH2

REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU B 54 OH TYR B 97 2.11 REMARK 500 OE2 GLU E 89 O HOH E 136 2.12 REMARK 500 O HOH A 174 O HOH A 202 2.15 REMARK 500 OE1 GLU D 54 OH TYR D 97 2.18 REMARK 500 OE2 GLU A 11 O HOH A 202 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLY B 47 N - CA - C ANGL. DEV. = 15.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 27 -118.26 58.49 REMARK 500 ASN A 99 -77.00 -109.62 REMARK 500 ASN B 27 -122.01 56.65 REMARK 500 GLU B 46 -73.23 -82.87 REMARK 500 ASN B 99 -73.76 -107.28 REMARK 500 LEU B 115 16.23 57.93 REMARK 500 SER C 12 40.67 -99.04 REMARK 500 ASN C 27 -124.27 55.04 REMARK 500 PHE C 98 78.39 -119.73 REMARK 500 ASN C 99 -76.24 -101.22 REMARK 500 ASN D 27 -117.64 62.13 REMARK 500 ASN E 27 -121.91 60.06 REMARK 500 PRO E 37 -96.58 -32.83 REMARK 500 VAL E 38 120.03 36.86 REMARK 500 ASP E 41 33.52 -93.75 REMARK 500 ASN E 42 27.27 47.87 REMARK 500 ASN E 99 -64.68 -128.88 REMARK 500 ASN F 27 -121.48 55.36 REMARK 500 ASN F 99 -70.62 -122.99 REMARK 500 REMARK 500 REMARK: NULL

REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 140 DISTANCE = 6.49 ANGSTROMS REMARK 525 HOH A 149 DISTANCE = 6.11 ANGSTROMS REMARK 525 HOH E 162 DISTANCE = 5.10 ANGSTROMS REMARK 525 HOH F 166 DISTANCE = 5.82 ANGSTROMS REMARK 525 HOH A 173 DISTANCE = 6.86 ANGSTROMS REMARK 525 HOH E 197 DISTANCE = 6.10 ANGSTROMS REMARK 525 HOH F 216 DISTANCE = 7.97 ANGSTROMS REMARK 525 HOH A 219 DISTANCE = 6.20 ANGSTROMS REMARK 525 HOH A 226 DISTANCE = 8.56 ANGSTROMS

REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: NYSGXRC-P003 RELATED DB: TARGETDB

DBREF 1JD1 A 1 129 UNP P40037 HMF1_YEAST 1 129 DBREF 1JD1 B 1 129 UNP P40037 HMF1_YEAST 1 129 DBREF 1JD1 C 1 129 UNP P40037 HMF1_YEAST 1 129 DBREF 1JD1 D 1 129 UNP P40037 HMF1_YEAST 1 129 DBREF 1JD1 E 1 129 UNP P40037 HMF1_YEAST 1 129 DBREF 1JD1 F 1 129 UNP P40037 HMF1_YEAST 1 129

SEQRES 1 A 129 MET VAL THR THR LEU THR PRO VAL ILE CYS GLU SER ALA SEQRES 2 A 129 PRO ALA ALA ALA ALA SER TYR SER HIS ALA MET LYS VAL SEQRES 3 A 129 ASN ASN LEU ILE PHE LEU SER GLY GLN ILE PRO VAL THR SEQRES 4 A 129 PRO ASP ASN LYS LEU VAL GLU GLY SER ILE ALA ASP LYS SEQRES 5 A 129 ALA GLU GLN VAL ILE GLN ASN ILE LYS ASN VAL LEU GLU SEQRES 6 A 129 ALA SER ASN SER SER LEU ASP ARG VAL VAL LYS VAL ASN SEQRES 7 A 129 ILE PHE LEU ALA ASP ILE ASN HIS PHE ALA GLU PHE ASN SEQRES 8 A 129 SER VAL TYR ALA LYS TYR PHE ASN THR HIS LYS PRO ALA SEQRES 9 A 129 ARG SER CYS VAL ALA VAL ALA ALA LEU PRO LEU GLY VAL SEQRES 10 A 129 ASP MET GLU MET GLU ALA ILE ALA ALA GLU ARG ASP SEQRES 1 B 129 MET VAL THR THR LEU THR PRO VAL ILE CYS GLU SER ALA SEQRES 2 B 129 PRO ALA ALA ALA ALA SER TYR SER HIS ALA MET LYS VAL SEQRES 3 B 129 ASN ASN LEU ILE PHE LEU SER GLY GLN ILE PRO VAL THR SEQRES 4 B 129 PRO ASP ASN LYS LEU VAL GLU GLY SER ILE ALA ASP LYS SEQRES 5 B 129 ALA GLU GLN VAL ILE GLN ASN ILE LYS ASN VAL LEU GLU SEQRES 6 B 129 ALA SER ASN SER SER LEU ASP ARG VAL VAL LYS VAL ASN SEQRES 7 B 129 ILE PHE LEU ALA ASP ILE ASN HIS PHE ALA GLU PHE ASN SEQRES 8 B 129 SER VAL TYR ALA LYS TYR PHE ASN THR HIS LYS PRO ALA SEQRES 9 B 129 ARG SER CYS VAL ALA VAL ALA ALA LEU PRO LEU GLY VAL SEQRES 10 B 129 ASP MET GLU MET GLU ALA ILE ALA ALA GLU ARG ASP SEQRES 1 C 129 MET VAL THR THR LEU THR PRO VAL ILE CYS GLU SER ALA SEQRES 2 C 129 PRO ALA ALA ALA ALA SER TYR SER HIS ALA MET LYS VAL SEQRES 3 C 129 ASN ASN LEU ILE PHE LEU SER GLY GLN ILE PRO VAL THR SEQRES 4 C 129 PRO ASP ASN LYS LEU VAL GLU GLY SER ILE ALA ASP LYS SEQRES 5 C 129 ALA GLU GLN VAL ILE GLN ASN ILE LYS ASN VAL LEU GLU SEQRES 6 C 129 ALA SER ASN SER SER LEU ASP ARG VAL VAL LYS VAL ASN SEQRES 7 C 129 ILE PHE LEU ALA ASP ILE ASN HIS PHE ALA GLU PHE ASN SEQRES 8 C 129 SER VAL TYR ALA LYS TYR PHE ASN THR HIS LYS PRO ALA SEQRES 9 C 129 ARG SER CYS VAL ALA VAL ALA ALA LEU PRO LEU GLY VAL SEQRES 10 C 129 ASP MET GLU MET GLU ALA ILE ALA ALA GLU ARG ASP SEQRES 1 D 129 MET VAL THR THR LEU THR PRO VAL ILE CYS GLU SER ALA SEQRES 2 D 129 PRO ALA ALA ALA ALA SER TYR SER HIS ALA MET LYS VAL SEQRES 3 D 129 ASN ASN LEU ILE PHE LEU SER GLY GLN ILE PRO VAL THR SEQRES 4 D 129 PRO ASP ASN LYS LEU VAL GLU GLY SER ILE ALA ASP LYS SEQRES 5 D 129 ALA GLU GLN VAL ILE GLN ASN ILE LYS ASN VAL LEU GLU SEQRES 6 D 129 ALA SER ASN SER SER LEU ASP ARG VAL VAL LYS VAL ASN SEQRES 7 D 129 ILE PHE LEU ALA ASP ILE ASN HIS PHE ALA GLU PHE ASN SEQRES 8 D 129 SER VAL TYR ALA LYS TYR PHE ASN THR HIS LYS PRO ALA SEQRES 9 D 129 ARG SER CYS VAL ALA VAL ALA ALA LEU PRO LEU GLY VAL SEQRES 10 D 129 ASP MET GLU MET GLU ALA ILE ALA ALA GLU ARG ASP SEQRES 1 E 129 MET VAL THR THR LEU THR PRO VAL ILE CYS GLU SER ALA SEQRES 2 E 129 PRO ALA ALA ALA ALA SER TYR SER HIS ALA MET LYS VAL SEQRES 3 E 129 ASN ASN LEU ILE PHE LEU SER GLY GLN ILE PRO VAL THR SEQRES 4 E 129 PRO ASP ASN LYS LEU VAL GLU GLY SER ILE ALA ASP LYS SEQRES 5 E 129 ALA GLU GLN VAL ILE GLN ASN ILE LYS ASN VAL LEU GLU SEQRES 6 E 129 ALA SER ASN SER SER LEU ASP ARG VAL VAL LYS VAL ASN SEQRES 7 E 129 ILE PHE LEU ALA ASP ILE ASN HIS PHE ALA GLU PHE ASN SEQRES 8 E 129 SER VAL TYR ALA LYS TYR PHE ASN THR HIS LYS PRO ALA SEQRES 9 E 129 ARG SER CYS VAL ALA VAL ALA ALA LEU PRO LEU GLY VAL SEQRES 10 E 129 ASP MET GLU MET GLU ALA ILE ALA ALA GLU ARG ASP SEQRES 1 F 129 MET VAL THR THR LEU THR PRO VAL ILE CYS GLU SER ALA SEQRES 2 F 129 PRO ALA ALA ALA ALA SER TYR SER HIS ALA MET LYS VAL SEQRES 3 F 129 ASN ASN LEU ILE PHE LEU SER GLY GLN ILE PRO VAL THR SEQRES 4 F 129 PRO ASP ASN LYS LEU VAL GLU GLY SER ILE ALA ASP LYS SEQRES 5 F 129 ALA GLU GLN VAL ILE GLN ASN ILE LYS ASN VAL LEU GLU SEQRES 6 F 129 ALA SER ASN SER SER LEU ASP ARG VAL VAL LYS VAL ASN SEQRES 7 F 129 ILE PHE LEU ALA ASP ILE ASN HIS PHE ALA GLU PHE ASN SEQRES 8 F 129 SER VAL TYR ALA LYS TYR PHE ASN THR HIS LYS PRO ALA SEQRES 9 F 129 ARG SER CYS VAL ALA VAL ALA ALA LEU PRO LEU GLY VAL SEQRES 10 F 129 ASP MET GLU MET GLU ALA ILE ALA ALA GLU ARG ASP

FORMUL 7 HOH *634(H2 O)

HELIX 1 1 SER A 48 SER A 67 1 20 HELIX 2 2 SER A 70 ASP A 72 5 3 HELIX 3 3 ASP A 83 ASN A 85 5 3 HELIX 4 4 HIS A 86 PHE A 98 1 13 HELIX 5 5 LEU A 113 VAL A 117 5 5 HELIX 6 6 SER B 48 SER B 67 1 20 HELIX 7 7 SER B 70 ASP B 72 5 3 HELIX 8 8 ASP B 83 ASN B 85 5 3 HELIX 9 9 HIS B 86 PHE B 98 1 13 HELIX 10 10 LEU B 113 VAL B 117 5 5 HELIX 11 11 SER C 48 SER C 67 1 20 HELIX 12 12 SER C 70 ASP C 72 5 3 HELIX 13 13 ASP C 83 ASN C 85 5 3 HELIX 14 14 HIS C 86 PHE C 98 1 13 HELIX 15 15 LEU C 113 VAL C 117 5 5 HELIX 16 16 SER D 48 SER D 67 1 20 HELIX 17 18 ASP D 83 ASN D 85 5 3 HELIX 18 19 HIS D 86 ASN D 99 1 14 HELIX 19 20 LEU D 113 VAL D 117 5 5 HELIX 20 21 SER E 48 SER E 67 1 20 HELIX 21 23 ASP E 83 ASN E 85 5 3 HELIX 22 24 HIS E 86 PHE E 98 1 13 HELIX 23 25 LEU E 113 VAL E 117 5 5 HELIX 24 26 SER F 48 SER F 67 1 20 HELIX 25 29 HIS F 86 PHE F 98 1 13 HELIX 26 30 LEU F 113 VAL F 117 5 5

SHEET 1 A 6 LEU A 5 VAL A 8 0 SHEET 2 A 6 ALA A 23 VAL A 26 -1 O ALA A 23 N VAL A 8 SHEET 3 A 6 LEU A 29 GLN A 35 -1 O LEU A 29 N VAL A 26 SHEET 4 A 6 MET A 119 ALA A 126 -1 O MET A 121 N GLN A 35 SHEET 5 A 6 VAL A 74 LEU A 81 -1 N VAL A 75 O ILE A 124 SHEET 6 A 6 ALA A 104 ALA A 109 1 N ALA A 104 O VAL A 75 SHEET 1 B 6 LEU B 5 VAL B 8 0 SHEET 2 B 6 ALA B 23 VAL B 26 -1 O ALA B 23 N VAL B 8 SHEET 3 B 6 LEU B 29 GLN B 35 -1 O LEU B 29 N VAL B 26 SHEET 4 B 6 MET B 119 ALA B 126 -1 O MET B 121 N GLN B 35 SHEET 5 B 6 VAL B 74 LEU B 81 -1 N VAL B 75 O ILE B 124 SHEET 6 B 6 ALA B 104 ALA B 109 1 N ALA B 104 O VAL B 75 SHEET 1 C 6 LEU C 5 VAL C 8 0 SHEET 2 C 6 ALA C 23 VAL C 26 -1 O ALA C 23 N VAL C 8 SHEET 3 C 6 LEU C 29 GLN C 35 -1 N LEU C 29 O VAL C 26 SHEET 4 C 6 MET C 119 ALA C 126 -1 O MET C 121 N GLN C 35 SHEET 5 C 6 VAL C 74 LEU C 81 -1 N VAL C 75 O ILE C 124 SHEET 6 C 6 ALA C 104 ALA C 109 1 N ALA C 104 O VAL C 75 SHEET 1 D 6 LEU D 5 VAL D 8 0 SHEET 2 D 6 ALA D 23 VAL D 26 -1 O ALA D 23 N VAL D 8 SHEET 3 D 6 LEU D 29 GLN D 35 -1 O LEU D 29 N VAL D 26 SHEET 4 D 6 MET D 119 ALA D 126 -1 O MET D 121 N GLN D 35 SHEET 5 D 6 VAL D 74 LEU D 81 -1 N VAL D 75 O ILE D 124 SHEET 6 D 6 ALA D 104 ALA D 109 1 O ALA D 104 N VAL D 77 SHEET 1 E 6 THR E 6 VAL E 8 0 SHEET 2 E 6 ALA E 23 VAL E 26 -1 O ALA E 23 N VAL E 8 SHEET 3 E 6 LEU E 29 GLN E 35 -1 O LEU E 29 N VAL E 26 SHEET 4 E 6 MET E 119 ALA E 126 -1 O MET E 121 N GLN E 35 SHEET 5 E 6 VAL E 74 LEU E 81 -1 N VAL E 75 O ILE E 124 SHEET 6 E 6 ALA E 104 ALA E 109 1 N ALA E 104 O VAL E 75 SHEET 1 F 6 LEU F 5 VAL F 8 0 SHEET 2 F 6 ALA F 23 VAL F 26 -1 O ALA F 23 N VAL F 8 SHEET 3 F 6 LEU F 29 GLN F 35 -1 N LEU F 29 O VAL F 26 SHEET 4 F 6 MET F 119 ALA F 126 -1 O MET F 121 N GLN F 35 SHEET 5 F 6 VAL F 74 LEU F 81 -1 N VAL F 75 O ILE F 124 SHEET 6 F 6 ALA F 104 ALA F 109 1 N ALA F 104 O VAL F 75

CRYST1 78.180 64.100 80.850 90.00 90.63 90.00 P 1 21 1 12

ORIGX1 1.000000 0.000000 0.000000 0.00000

ORIGX2 0.000000 1.000000 0.000000 0.00000

ORIGX3 0.000000 0.000000 1.000000 0.00000

SCALE1 0.012791 0.000000 0.000141 0.00000

SCALE2 0.000000 0.015601 0.000000 0.00000

SCALE3 0.000000 0.000000 0.012369 0.00000