10 20 30 40 50 60 70 80 1J5L - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER METAL BINDING PROTEIN 16-MAY-02 1J5L
TITLE NMR STRUCTURE OF THE ISOLATED BETA_C DOMAIN OF LOBSTER TITLE 2 METALLOTHIONEIN-1
COMPND MOL_ID: 1; COMPND 2 MOLECULE: METALLOTHIONEIN-1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: BETA_C DOMAIN (RESIDUES 29-58); COMPND 5 SYNONYM: CUMT-1; COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 OTHER_DETAILS: THE PEPTIDE WAS CHEMICALLY SYNTHESIZED. THE SOURCE 4 SEQUENCE OF THE PEPTIDE IS NATURALLY FOUND IN HOMARUS SOURCE 5 AMERICANUS (AMERICAN LOBSTER).
KEYWDS BETA-DOMAIN, METALLOPROTEIN, CADMIUM-SULFUR-CLUSTER, METAL KEYWDS 2 BINDING PROTEIN
EXPDTA SOLUTION NMR
AUTHOR A.MUNOZ,F.H.FORSTERLING,C.F.SHAW III,D.H.PETERING
REVDAT 4 24-FEB-09 1J5L 1 VERSN REVDAT 3 01-APR-03 1J5L 1 JRNL REVDAT 2 23-DEC-02 1J5L 1 EXPDTA JRNL REMARK REVDAT 1 22-MAY-02 1J5L 0
SPRSDE 22-MAY-02 1J5L 1HZQ
JRNL AUTH A.MUNOZ,F.H.FORSTERLING,C.F.SHAW III,D.H.PETERING JRNL TITL STRUCTURE OF THE (113)CD(3)BETA DOMAINS FROM JRNL TITL 2 HOMARUS AMERICANUS METALLOTHIONEIN-1: HYDROGEN JRNL TITL 3 BONDING AND SOLVENT ACCESSIBILITY OF SULFUR ATOMS JRNL REF J.BIOL.INORG.CHEM. V. 7 713 2002 JRNL REFN ISSN 0949-8257 JRNL PMID 12203008 JRNL DOI 10.1007/S00775-002-0345-3
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.851 REMARK 3 AUTHORS : AXEL BRUNGER REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE STRUCTURE IS BASED ON 228 NOE REMARK 3 BASED DISTANCE RESTRAINTS, 20 DIHEDRAL ANGLE RESTRAINTS AND 33 REMARK 3 METAL CLUSTER RESTRAINTS DERIVED FROM 113CD-HSQC-TOCSY REMARK 3 EXPERIMENTS.
REMARK 4 REMARK 4 1J5L COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-MAY-02. REMARK 100 THE RCSB ID CODE IS RCSB001640.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.4 REMARK 210 IONIC STRENGTH : 5MM TRIS REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 2-3MM 113CD3-MT-BETA_C, 5MM D REMARK 210 -TRIS BUFFER; 2-3MM 113CD3-MT- REMARK 210 BETA_C, 5MM D-TRIS BUFFER REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : DQF-COSY, 2D NOESY, 2D TOCSY, REMARK 210 2D 113CD HSQC-TOCSY REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ, 300 MHZ REMARK 210 SPECTROMETER MODEL : DRX, DPX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 2.5, FELIX 2000, X- REMARK 210 PLOR 3.851, MOLMOL 2K.1 REMARK 210 METHOD USED : AB INITIO SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : NULL REMARK 210 CONFORMERS, NUMBER SUBMITTED : 1 REMARK 210 CONFORMERS, SELECTION CRITERIA : NULL REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: THIS STRUCTURE WAS DETERMINED USING STANDARD 2D REMARK 210 HOMONUCLEAR TECHNIQUES
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 3 -146.15 -80.59 REMARK 500 LYS A 5 42.72 -94.76 REMARK 500 SER A 8 -86.23 173.39 REMARK 500 CYS A 12 93.27 32.33 REMARK 500 SER A 14 -58.57 -153.94 REMARK 500 LYS A 15 -44.02 -164.01 REMARK 500 CYS A 18 -74.42 -90.21 REMARK 500 SER A 23 49.85 -78.46 REMARK 500 LYS A 24 179.93 176.18 REMARK 500 CYS A 26 107.46 -42.15 REMARK 500 SER A 27 72.50 -60.20 REMARK 500 CYS A 28 -24.95 178.55 REMARK 500 CYS A 29 -160.66 -72.95 REMARK 500 REMARK 500 REMARK: NULL
REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A 32 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 12 SG REMARK 620 2 CYS A 18 SG 110.4 REMARK 620 3 CYS A 22 SG 108.4 109.0 REMARK 620 4 CYS A 29 SG 107.7 109.4 111.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A 33 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 6 SG REMARK 620 2 CYS A 10 SG 107.6 REMARK 620 3 CYS A 28 SG 106.7 111.5 REMARK 620 4 CYS A 29 SG 108.7 112.7 109.5 REMARK 620 5 CYS A 29 N 169.8 73.6 81.8 62.3 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A 34 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 3 SG REMARK 620 2 CYS A 6 SG 108.4 REMARK 620 3 CYS A 22 SG 110.2 104.9 REMARK 620 4 CYS A 26 SG 108.2 114.6 110.5 REMARK 620 N 1 2 3
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD A 32 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD A 33 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD A 34
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4754 RELATED DB: BMRB REMARK 900 CONTAINS 1H CHEMICAL SHIFTS AND 3JHNHA AND 3JHAHB COUPLING REMARK 900 CONSTANTS REMARK 900 RELATED ID: 1J5M RELATED DB: PDB REMARK 900 CONTAINS THE MINIMIZED AVERAGE STRUCTURE OF THE BETA_N REMARK 900 DOMAIN OF THIS PROTEIN
DBREF 1J5L A 2 31 UNP P29499 MT1_HOMAM 29 58
SEQRES 1 A 30 PRO CYS GLU LYS CYS THR SER GLY CYS LYS CYS PRO SER SEQRES 2 A 30 LYS ASP GLU CYS ALA LYS THR CYS SER LYS PRO CYS SER SEQRES 3 A 30 CYS CYS PRO THR
HET CD A 32 1 HET CD A 33 1 HET CD A 34 1
HETNAM CD CADMIUM ION
FORMUL 2 CD 3(CD 2+)
HELIX 1 1 CYS A 3 THR A 7 5 5 HELIX 2 2 GLU A 17 CYS A 22 1 6
LINK CD CD A 32 SG CYS A 12 1555 1555 2.55 LINK CD CD A 32 SG CYS A 18 1555 1555 2.54 LINK CD CD A 32 SG CYS A 22 1555 1555 2.55 LINK CD CD A 32 SG CYS A 29 1555 1555 2.54 LINK CD CD A 33 SG CYS A 6 1555 1555 2.55 LINK CD CD A 33 SG CYS A 10 1555 1555 2.55 LINK CD CD A 33 SG CYS A 28 1555 1555 2.55 LINK CD CD A 33 SG CYS A 29 1555 1555 2.57 LINK CD CD A 34 SG CYS A 3 1555 1555 2.55 LINK CD CD A 34 SG CYS A 6 1555 1555 2.54 LINK CD CD A 34 SG CYS A 22 1555 1555 2.54 LINK CD CD A 34 SG CYS A 26 1555 1555 2.57 LINK CD CD A 33 N CYS A 29 1555 1555 2.89
SITE 1 AC1 4 CYS A 12 CYS A 18 CYS A 22 CYS A 29 SITE 1 AC2 5 CYS A 6 CYS A 10 CYS A 26 CYS A 28 SITE 2 AC2 5 CYS A 29 SITE 1 AC3 4 CYS A 3 CYS A 6 CYS A 22 CYS A 26
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000