10 20 30 40 50 60 70 80 1IYW - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER LIGASE 10-SEP-02 1IYW
TITLE PRELIMINARY STRUCTURE OF THERMUS THERMOPHILUS LIGAND-FREE TITLE 2 VALYL-TRNA SYNTHETASE
COMPND MOL_ID: 1; COMPND 2 MOLECULE: VALYL-TRNA SYNTHETASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 6.1.1.9; COMPND 5 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; SOURCE 3 ORGANISM_TAXID: 274; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562
KEYWDS ROSSMANN FOLD, COILED COIL, RIKEN STRUCTURAL KEYWDS 2 GENOMICS/PROTEOMICS INITIATIVE, RSGI, STRUCTURAL GENOMICS, KEYWDS 3 LIGASE
EXPDTA X-RAY DIFFRACTION
MDLTYP CA ATOMS ONLY, CHAIN A, B
AUTHOR S.FUKAI,O.NUREKI,S.SEKINE,A.SHIMADA,D.G.VASSYLYEV, AUTHOR 2 S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE AUTHOR 3 (RSGI)
REVDAT 2 24-FEB-09 1IYW 1 VERSN REVDAT 1 17-JUN-03 1IYW 0
JRNL AUTH S.FUKAI,O.NUREKI,S.SEKINE,A.SHIMADA,D.G.VASSYLYEV, JRNL AUTH 2 S.YOKOYAMA JRNL TITL MECHANISM OF MOLECULAR INTERACTIONS FOR TRNA(VAL) JRNL TITL 2 RECOGNITION BY VALYL-TRNA SYNTHETASE JRNL REF RNA V. 9 100 2003 JRNL REFN ISSN 1355-8382 JRNL PMID 12554880 JRNL DOI 10.1261/RNA.2760703
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. 4.00 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 4.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 10.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 17584 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.316 REMARK 3 FREE R VALUE : 0.383 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 854 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 4.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 4.23 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 90.20 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.3220 REMARK 3 BIN FREE R VALUE : 0.3600 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 129 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.032 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1724 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.59 REMARK 3 ESD FROM SIGMAA (A) : 0.77 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.81 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.42 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.020 REMARK 3 BOND ANGLES (DEGREES) : 1.70 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 23.30 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.21 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE COORDINATES FOR ONLY THE ALPHA REMARK 3 CARBONS ARE PRESENT IN THE STRUCTURE. THE NUMBER OF MISSING REMARK 3 ATOMS WAS SO MUCH THAT REMARK 470 FOR THE MISSING ATOMS LIST REMARK 3 WERE REMOVED.
REMARK 4 REMARK 4 1IYW COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 11-SEP-02. REMARK 100 THE RCSB ID CODE IS RCSB005420.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL44XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.900 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : OXFORD PX210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 65363 REMARK 200 RESOLUTION RANGE HIGH (A) : 4.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.8 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : 0.14400 REMARK 200 R SYM (I) : 0.14400 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 7.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 4.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 4.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 89.4 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.39600 REMARK 200 R SYM FOR SHELL (I) : 0.39600 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.89 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG4000, ISOPROPANOL, LITHIUM REMARK 280 SULFATE, PH 6.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 20K
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 93.28100 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 103.66400 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 93.28100 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 103.66400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 475 REMARK 475 ZERO OCCUPANCY RESIDUES REMARK 475 THE FOLLOWING RESIDUES WERE MODELED WITH ZERO OCCUPANCY. REMARK 475 THE LOCATION AND PROPERTIES OF THESE RESIDUES MAY NOT REMARK 475 BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 475 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE) REMARK 475 M RES C SSEQI REMARK 475 VAL A 173 REMARK 475 ASN A 174 REMARK 475 TRP A 175 REMARK 475 CYS A 176 REMARK 475 PRO A 177 REMARK 475 ARG A 178 REMARK 475 CYS A 179 REMARK 475 GLU A 180 REMARK 475 THR A 181 REMARK 475 THR A 182 REMARK 475 LEU A 183 REMARK 475 SER A 184 REMARK 475 ASP A 185 REMARK 475 LEU A 186 REMARK 475 GLU A 187 REMARK 475 VAL A 188 REMARK 475 GLU A 189 REMARK 475 THR A 190 REMARK 475 GLU A 191 REMARK 475 PRO A 192 REMARK 475 THR A 193 REMARK 475 PRO A 194 REMARK 475 GLY A 195 REMARK 475 LYS A 196 REMARK 475 LEU A 197 REMARK 475 TYR A 198 REMARK 475 THR A 199 REMARK 475 LEU A 200 REMARK 475 ARG A 201 REMARK 475 TYR A 202 REMARK 475 GLU A 203 REMARK 475 VAL A 204 REMARK 475 GLU A 205 REMARK 475 GLY A 206 REMARK 475 GLY A 207 REMARK 475 GLY A 208 REMARK 475 PHE A 209 REMARK 475 ILE A 210 REMARK 475 GLU A 211 REMARK 475 ILE A 212 REMARK 475 ALA A 213 REMARK 475 THR A 214 REMARK 475 VAL A 215 REMARK 475 ARG A 216 REMARK 475 PRO A 217 REMARK 475 GLU A 218 REMARK 475 THR A 219 REMARK 475 VAL A 220 REMARK 475 PHE A 221 REMARK 475 ALA A 222 REMARK 475 ASP A 223 REMARK 475 GLN A 224 REMARK 475 ALA A 225 REMARK 475 ILE A 226 REMARK 475 ALA A 227 REMARK 475 VAL A 228 REMARK 475 HIS A 229 REMARK 475 PRO A 230 REMARK 475 GLU A 231 REMARK 475 ASP A 232 REMARK 475 GLU A 233 REMARK 475 ARG A 234 REMARK 475 TYR A 235 REMARK 475 ARG A 236 REMARK 475 HIS A 237 REMARK 475 LEU A 238 REMARK 475 LEU A 239 REMARK 475 GLY A 240 REMARK 475 LYS A 241 REMARK 475 ARG A 242 REMARK 475 ALA A 243 REMARK 475 ARG A 244 REMARK 475 ILE A 245 REMARK 475 PRO A 246 REMARK 475 LEU A 247 REMARK 475 THR A 248 REMARK 475 GLU A 249 REMARK 475 VAL A 250 REMARK 475 TRP A 251 REMARK 475 ILE A 252 REMARK 475 PRO A 253 REMARK 475 ILE A 254 REMARK 475 LEU A 255 REMARK 475 ALA A 256 REMARK 475 ASP A 257 REMARK 475 PRO A 258 REMARK 475 ALA A 259 REMARK 475 VAL A 260 REMARK 475 GLU A 261 REMARK 475 LYS A 262 REMARK 475 ASP A 263 REMARK 475 PHE A 264 REMARK 475 GLY A 265 REMARK 475 THR A 266 REMARK 475 GLY A 267 REMARK 475 ALA A 268 REMARK 475 LEU A 269 REMARK 475 LYS A 270 REMARK 475 VAL A 271 REMARK 475 THR A 272 REMARK 475 PRO A 273 REMARK 475 ALA A 274 REMARK 475 HIS A 275 REMARK 475 ASP A 276 REMARK 475 PRO A 277 REMARK 475 LEU A 278 REMARK 475 ASP A 279 REMARK 475 TYR A 280 REMARK 475 GLU A 281 REMARK 475 ILE A 282 REMARK 475 GLY A 283 REMARK 475 GLU A 284 REMARK 475 ARG A 285 REMARK 475 HIS A 286 REMARK 475 GLY A 287 REMARK 475 LEU A 288 REMARK 475 LYS A 289 REMARK 475 PRO A 290 REMARK 475 VAL A 291 REMARK 475 SER A 292 REMARK 475 VAL A 293 REMARK 475 ILE A 294 REMARK 475 ASN A 295 REMARK 475 LEU A 296 REMARK 475 GLU A 297 REMARK 475 GLY A 298 REMARK 475 ARG A 299 REMARK 475 MET A 300 REMARK 475 GLU A 301 REMARK 475 GLY A 302 REMARK 475 GLU A 303 REMARK 475 ARG A 304 REMARK 475 VAL A 305 REMARK 475 PRO A 306 REMARK 475 GLU A 307 REMARK 475 ALA A 308 REMARK 475 LEU A 309 REMARK 475 ARG A 310 REMARK 475 GLY A 311 REMARK 475 LEU A 312 REMARK 475 ASP A 313 REMARK 475 ARG A 314 REMARK 475 PHE A 315 REMARK 475 GLU A 316 REMARK 475 ALA A 317 REMARK 475 ARG A 318 REMARK 475 ARG A 319 REMARK 475 LYS A 320 REMARK 475 ALA A 321 REMARK 475 VAL A 322 REMARK 475 GLU A 323 REMARK 475 LEU A 324 REMARK 475 PHE A 325 REMARK 475 ARG A 326 REMARK 475 GLU A 327 REMARK 475 ALA A 328 REMARK 475 GLY A 329 REMARK 475 HIS A 330 REMARK 475 LEU A 331 REMARK 475 VAL A 332 REMARK 475 LYS A 333 REMARK 475 GLU A 334 REMARK 475 GLU A 335 REMARK 475 ASP A 336 REMARK 475 TYR A 337 REMARK 475 THR A 338 REMARK 475 ILE A 339 REMARK 475 ALA A 340 REMARK 475 LEU A 341 REMARK 475 ALA A 342 REMARK 475 THR A 343 REMARK 475 CYS A 344 REMARK 475 SER A 345 REMARK 475 ARG A 346 REMARK 475 CYS A 347 REMARK 475 GLY A 348 REMARK 475 THR A 349 REMARK 475 PRO A 350 REMARK 475 ILE A 351 REMARK 475 GLU A 352 REMARK 475 TYR A 353 REMARK 475 ALA A 354 REMARK 475 VAL B 173 REMARK 475 ASN B 174 REMARK 475 TRP B 175 REMARK 475 CYS B 176 REMARK 475 PRO B 177 REMARK 475 ARG B 178 REMARK 475 CYS B 179 REMARK 475 GLU B 180 REMARK 475 THR B 181 REMARK 475 THR B 182 REMARK 475 LEU B 183 REMARK 475 SER B 184 REMARK 475 ASP B 185 REMARK 475 LEU B 186 REMARK 475 GLU B 187 REMARK 475 VAL B 188 REMARK 475 GLU B 189 REMARK 475 THR B 190 REMARK 475 GLU B 191 REMARK 475 PRO B 192 REMARK 475 THR B 193 REMARK 475 PRO B 194 REMARK 475 GLY B 195 REMARK 475 LYS B 196 REMARK 475 LEU B 197 REMARK 475 TYR B 198 REMARK 475 THR B 199 REMARK 475 LEU B 200 REMARK 475 ARG B 201 REMARK 475 TYR B 202 REMARK 475 GLU B 203 REMARK 475 VAL B 204 REMARK 475 GLU B 205 REMARK 475 GLY B 206 REMARK 475 GLY B 207 REMARK 475 GLY B 208 REMARK 475 PHE B 209 REMARK 475 ILE B 210 REMARK 475 GLU B 211 REMARK 475 ILE B 212 REMARK 475 ALA B 213 REMARK 475 THR B 214 REMARK 475 VAL B 215 REMARK 475 ARG B 216 REMARK 475 PRO B 217 REMARK 475 GLU B 218 REMARK 475 THR B 219 REMARK 475 VAL B 220 REMARK 475 PHE B 221 REMARK 475 ALA B 222 REMARK 475 ASP B 223 REMARK 475 GLN B 224 REMARK 475 ALA B 225 REMARK 475 ILE B 226 REMARK 475 ALA B 227 REMARK 475 VAL B 228 REMARK 475 HIS B 229 REMARK 475 PRO B 230 REMARK 475 GLU B 231 REMARK 475 ASP B 232 REMARK 475 GLU B 233 REMARK 475 ARG B 234 REMARK 475 TYR B 235 REMARK 475 ARG B 236 REMARK 475 HIS B 237 REMARK 475 LEU B 238 REMARK 475 LEU B 239 REMARK 475 GLY B 240 REMARK 475 LYS B 241 REMARK 475 ARG B 242 REMARK 475 ALA B 243 REMARK 475 ARG B 244 REMARK 475 ILE B 245 REMARK 475 PRO B 246 REMARK 475 LEU B 247 REMARK 475 THR B 248 REMARK 475 GLU B 249 REMARK 475 VAL B 250 REMARK 475 TRP B 251 REMARK 475 ILE B 252 REMARK 475 PRO B 253 REMARK 475 ILE B 254 REMARK 475 LEU B 255 REMARK 475 ALA B 256 REMARK 475 ASP B 257 REMARK 475 PRO B 258 REMARK 475 ALA B 259 REMARK 475 VAL B 260 REMARK 475 GLU B 261 REMARK 475 LYS B 262 REMARK 475 ASP B 263 REMARK 475 PHE B 264 REMARK 475 GLY B 265 REMARK 475 THR B 266 REMARK 475 GLY B 267 REMARK 475 ALA B 268 REMARK 475 LEU B 269 REMARK 475 LYS B 270 REMARK 475 VAL B 271 REMARK 475 THR B 272 REMARK 475 PRO B 273 REMARK 475 ALA B 274 REMARK 475 HIS B 275 REMARK 475 ASP B 276 REMARK 475 PRO B 277 REMARK 475 LEU B 278 REMARK 475 ASP B 279 REMARK 475 TYR B 280 REMARK 475 GLU B 281 REMARK 475 ILE B 282 REMARK 475 GLY B 283 REMARK 475 GLU B 284 REMARK 475 ARG B 285 REMARK 475 HIS B 286 REMARK 475 GLY B 287 REMARK 475 LEU B 288 REMARK 475 LYS B 289 REMARK 475 PRO B 290 REMARK 475 VAL B 291 REMARK 475 SER B 292 REMARK 475 VAL B 293 REMARK 475 ILE B 294 REMARK 475 ASN B 295 REMARK 475 LEU B 296 REMARK 475 GLU B 297 REMARK 475 GLY B 298 REMARK 475 ARG B 299 REMARK 475 MET B 300 REMARK 475 GLU B 301 REMARK 475 GLY B 302 REMARK 475 GLU B 303 REMARK 475 ARG B 304 REMARK 475 VAL B 305 REMARK 475 PRO B 306 REMARK 475 GLU B 307 REMARK 475 ALA B 308 REMARK 475 LEU B 309 REMARK 475 ARG B 310 REMARK 475 GLY B 311 REMARK 475 LEU B 312 REMARK 475 ASP B 313 REMARK 475 ARG B 314 REMARK 475 PHE B 315 REMARK 475 GLU B 316 REMARK 475 ALA B 317 REMARK 475 ARG B 318 REMARK 475 ARG B 319 REMARK 475 LYS B 320 REMARK 475 ALA B 321 REMARK 475 VAL B 322 REMARK 475 GLU B 323 REMARK 475 LEU B 324 REMARK 475 PHE B 325 REMARK 475 ARG B 326 REMARK 475 GLU B 327 REMARK 475 ALA B 328 REMARK 475 GLY B 329 REMARK 475 HIS B 330 REMARK 475 LEU B 331 REMARK 475 VAL B 332 REMARK 475 LYS B 333 REMARK 475 GLU B 334 REMARK 475 GLU B 335 REMARK 475 ASP B 336 REMARK 475 TYR B 337 REMARK 475 THR B 338 REMARK 475 ILE B 339 REMARK 475 ALA B 340 REMARK 475 LEU B 341 REMARK 475 ALA B 342 REMARK 475 THR B 343 REMARK 475 CYS B 344 REMARK 475 SER B 345 REMARK 475 ARG B 346 REMARK 475 CYS B 347 REMARK 475 GLY B 348 REMARK 475 THR B 349 REMARK 475 PRO B 350 REMARK 475 ILE B 351 REMARK 475 GLU B 352 REMARK 475 TYR B 353 REMARK 475 ALA B 354
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1GAX RELATED DB: PDB REMARK 900 1GAX CONTAINS THE SAME PROTEIN COMPLEXED WITH TRNA(VAL) AND REMARK 900 VALYL-ADENYLATE ANALOGUE REMARK 900 RELATED ID: 1IVS RELATED DB: PDB REMARK 900 1IVS CONTAINS THE SAME PROTEIN COMPLEXED WITH TRNA(VAL) AND REMARK 900 VALYL-ADENYLATE ANALOGUE REMARK 900 RELATED ID: TRT001000468.1 RELATED DB: TARGETDB
DBREF 1IYW A 1 862 UNP P96142 SYV_THETH 1 862 DBREF 1IYW B 1 862 UNP P96142 SYV_THETH 1 862
SEQRES 1 A 862 MET ASP LEU PRO LYS ALA TYR ASP PRO LYS SER VAL GLU SEQRES 2 A 862 PRO LYS TRP ALA GLU LYS TRP ALA LYS ASN PRO PHE VAL SEQRES 3 A 862 ALA ASN PRO LYS SER GLY LYS PRO PRO PHE VAL ILE PHE SEQRES 4 A 862 MET PRO PRO PRO ASN VAL THR GLY SER LEU HIS MET GLY SEQRES 5 A 862 HIS ALA LEU ASP ASN SER LEU GLN ASP ALA LEU ILE ARG SEQRES 6 A 862 TYR LYS ARG MET ARG GLY PHE GLU ALA VAL TRP LEU PRO SEQRES 7 A 862 GLY THR ASP HIS ALA GLY ILE ALA THR GLN VAL VAL VAL SEQRES 8 A 862 GLU ARG LEU LEU LEU LYS GLU GLY LYS THR ARG HIS ASP SEQRES 9 A 862 LEU GLY ARG GLU LYS PHE LEU GLU ARG VAL TRP GLN TRP SEQRES 10 A 862 LYS GLU GLU SER GLY GLY THR ILE LEU LYS GLN LEU LYS SEQRES 11 A 862 ARG LEU GLY ALA SER ALA ASP TRP SER ARG GLU ALA PHE SEQRES 12 A 862 THR MET ASP GLU LYS ARG SER ARG ALA VAL ARG TYR ALA SEQRES 13 A 862 PHE SER ARG TYR TYR HIS GLU GLY LEU ALA TYR ARG ALA SEQRES 14 A 862 PRO ARG LEU VAL ASN TRP CYS PRO ARG CYS GLU THR THR SEQRES 15 A 862 LEU SER ASP LEU GLU VAL GLU THR GLU PRO THR PRO GLY SEQRES 16 A 862 LYS LEU TYR THR LEU ARG TYR GLU VAL GLU GLY GLY GLY SEQRES 17 A 862 PHE ILE GLU ILE ALA THR VAL ARG PRO GLU THR VAL PHE SEQRES 18 A 862 ALA ASP GLN ALA ILE ALA VAL HIS PRO GLU ASP GLU ARG SEQRES 19 A 862 TYR ARG HIS LEU LEU GLY LYS ARG ALA ARG ILE PRO LEU SEQRES 20 A 862 THR GLU VAL TRP ILE PRO ILE LEU ALA ASP PRO ALA VAL SEQRES 21 A 862 GLU LYS ASP PHE GLY THR GLY ALA LEU LYS VAL THR PRO SEQRES 22 A 862 ALA HIS ASP PRO LEU ASP TYR GLU ILE GLY GLU ARG HIS SEQRES 23 A 862 GLY LEU LYS PRO VAL SER VAL ILE ASN LEU GLU GLY ARG SEQRES 24 A 862 MET GLU GLY GLU ARG VAL PRO GLU ALA LEU ARG GLY LEU SEQRES 25 A 862 ASP ARG PHE GLU ALA ARG ARG LYS ALA VAL GLU LEU PHE SEQRES 26 A 862 ARG GLU ALA GLY HIS LEU VAL LYS GLU GLU ASP TYR THR SEQRES 27 A 862 ILE ALA LEU ALA THR CYS SER ARG CYS GLY THR PRO ILE SEQRES 28 A 862 GLU TYR ALA ILE PHE PRO GLN TRP TRP LEU ARG MET ARG SEQRES 29 A 862 PRO LEU ALA GLU GLU VAL LEU LYS GLY LEU ARG ARG GLY SEQRES 30 A 862 ASP ILE ALA PHE VAL PRO GLU ARG TRP LYS LYS VAL ASN SEQRES 31 A 862 MET ASP TRP LEU GLU ASN VAL LYS ASP TRP ASN ILE SER SEQRES 32 A 862 ARG GLN LEU TRP TRP GLY HIS GLN ILE PRO ALA TRP TYR SEQRES 33 A 862 CYS GLU ASP CYS GLN ALA VAL ASN VAL PRO ARG PRO GLU SEQRES 34 A 862 ARG TYR LEU GLU ASP PRO THR SER CYS GLU ALA CYS GLY SEQRES 35 A 862 SER PRO ARG LEU LYS ARG ASP GLU ASP VAL PHE ASP THR SEQRES 36 A 862 TRP PHE SER SER ALA LEU TRP PRO LEU SER THR LEU GLY SEQRES 37 A 862 TRP PRO GLU GLU THR GLU ASP LEU LYS ALA PHE TYR PRO SEQRES 38 A 862 GLY ASP VAL LEU VAL THR GLY TYR ASP ILE LEU PHE LEU SEQRES 39 A 862 TRP VAL SER ARG MET GLU VAL SER GLY TYR HIS PHE MET SEQRES 40 A 862 GLY GLU ARG PRO PHE LYS THR VAL LEU LEU HIS GLY LEU SEQRES 41 A 862 VAL LEU ASP GLU LYS GLY GLN LYS MET SER LYS SER LYS SEQRES 42 A 862 GLY ASN VAL ILE ASP PRO LEU GLU MET VAL GLU ARG TYR SEQRES 43 A 862 GLY ALA ASP ALA LEU ARG PHE ALA LEU ILE TYR LEU ALA SEQRES 44 A 862 THR GLY GLY GLN ASP ILE ARG LEU ASP LEU ARG TRP LEU SEQRES 45 A 862 GLU MET ALA ARG ASN PHE ALA ASN LYS LEU TYR ASN ALA SEQRES 46 A 862 ALA ARG PHE VAL LEU LEU SER ARG GLU GLY PHE GLN ALA SEQRES 47 A 862 LYS GLU ASP THR PRO THR LEU ALA ASP ARG PHE MET ARG SEQRES 48 A 862 SER ARG LEU SER ARG GLY VAL GLU GLU ILE THR ALA LEU SEQRES 49 A 862 TYR GLU ALA LEU ASP LEU ALA GLN ALA ALA ARG GLU VAL SEQRES 50 A 862 TYR GLU LEU VAL TRP SER GLU PHE CYS ASP TRP TYR LEU SEQRES 51 A 862 GLU ALA ALA LYS PRO ALA LEU LYS ALA GLY ASN ALA HIS SEQRES 52 A 862 THR LEU ARG THR LEU GLU GLU VAL LEU ALA VAL LEU LEU SEQRES 53 A 862 LYS LEU LEU HIS PRO MET MET PRO PHE LEU THR SER GLU SEQRES 54 A 862 LEU TYR GLN ALA LEU THR GLY LYS GLU GLU LEU ALA LEU SEQRES 55 A 862 GLU ALA TRP PRO GLU PRO GLY GLY ARG ASP GLU GLU ALA SEQRES 56 A 862 GLU ARG ALA PHE GLU ALA LEU LYS GLN ALA VAL THR ALA SEQRES 57 A 862 VAL ARG ALA LEU LYS ALA GLU ALA GLY LEU PRO PRO ALA SEQRES 58 A 862 GLN GLU VAL ARG VAL TYR LEU GLU GLY GLU THR ALA PRO SEQRES 59 A 862 VAL GLU GLU ASN LEU GLU VAL PHE ARG PHE LEU SER ARG SEQRES 60 A 862 ALA ASP LEU LEU PRO GLU ARG PRO ALA LYS ALA LEU VAL SEQRES 61 A 862 LYS ALA MET PRO ARG VAL THR ALA ARG MET PRO LEU GLU SEQRES 62 A 862 GLY LEU LEU ASP VAL GLU GLU TRP ARG ARG ARG GLN GLU SEQRES 63 A 862 LYS ARG LEU LYS GLU LEU LEU ALA LEU ALA GLU ARG SER SEQRES 64 A 862 GLN ARG LYS LEU ALA SER PRO GLY PHE ARG GLU LYS ALA SEQRES 65 A 862 PRO LYS GLU VAL VAL GLU ALA GLU GLU ALA ARG LEU LYS SEQRES 66 A 862 GLU ASN LEU GLU GLN ALA GLU ARG ILE ARG GLU ALA LEU SEQRES 67 A 862 SER GLN ILE GLY SEQRES 1 B 862 MET ASP LEU PRO LYS ALA TYR ASP PRO LYS SER VAL GLU SEQRES 2 B 862 PRO LYS TRP ALA GLU LYS TRP ALA LYS ASN PRO PHE VAL SEQRES 3 B 862 ALA ASN PRO LYS SER GLY LYS PRO PRO PHE VAL ILE PHE SEQRES 4 B 862 MET PRO PRO PRO ASN VAL THR GLY SER LEU HIS MET GLY SEQRES 5 B 862 HIS ALA LEU ASP ASN SER LEU GLN ASP ALA LEU ILE ARG SEQRES 6 B 862 TYR LYS ARG MET ARG GLY PHE GLU ALA VAL TRP LEU PRO SEQRES 7 B 862 GLY THR ASP HIS ALA GLY ILE ALA THR GLN VAL VAL VAL SEQRES 8 B 862 GLU ARG LEU LEU LEU LYS GLU GLY LYS THR ARG HIS ASP SEQRES 9 B 862 LEU GLY ARG GLU LYS PHE LEU GLU ARG VAL TRP GLN TRP SEQRES 10 B 862 LYS GLU GLU SER GLY GLY THR ILE LEU LYS GLN LEU LYS SEQRES 11 B 862 ARG LEU GLY ALA SER ALA ASP TRP SER ARG GLU ALA PHE SEQRES 12 B 862 THR MET ASP GLU LYS ARG SER ARG ALA VAL ARG TYR ALA SEQRES 13 B 862 PHE SER ARG TYR TYR HIS GLU GLY LEU ALA TYR ARG ALA SEQRES 14 B 862 PRO ARG LEU VAL ASN TRP CYS PRO ARG CYS GLU THR THR SEQRES 15 B 862 LEU SER ASP LEU GLU VAL GLU THR GLU PRO THR PRO GLY SEQRES 16 B 862 LYS LEU TYR THR LEU ARG TYR GLU VAL GLU GLY GLY GLY SEQRES 17 B 862 PHE ILE GLU ILE ALA THR VAL ARG PRO GLU THR VAL PHE SEQRES 18 B 862 ALA ASP GLN ALA ILE ALA VAL HIS PRO GLU ASP GLU ARG SEQRES 19 B 862 TYR ARG HIS LEU LEU GLY LYS ARG ALA ARG ILE PRO LEU SEQRES 20 B 862 THR GLU VAL TRP ILE PRO ILE LEU ALA ASP PRO ALA VAL SEQRES 21 B 862 GLU LYS ASP PHE GLY THR GLY ALA LEU LYS VAL THR PRO SEQRES 22 B 862 ALA HIS ASP PRO LEU ASP TYR GLU ILE GLY GLU ARG HIS SEQRES 23 B 862 GLY LEU LYS PRO VAL SER VAL ILE ASN LEU GLU GLY ARG SEQRES 24 B 862 MET GLU GLY GLU ARG VAL PRO GLU ALA LEU ARG GLY LEU SEQRES 25 B 862 ASP ARG PHE GLU ALA ARG ARG LYS ALA VAL GLU LEU PHE SEQRES 26 B 862 ARG GLU ALA GLY HIS LEU VAL LYS GLU GLU ASP TYR THR SEQRES 27 B 862 ILE ALA LEU ALA THR CYS SER ARG CYS GLY THR PRO ILE SEQRES 28 B 862 GLU TYR ALA ILE PHE PRO GLN TRP TRP LEU ARG MET ARG SEQRES 29 B 862 PRO LEU ALA GLU GLU VAL LEU LYS GLY LEU ARG ARG GLY SEQRES 30 B 862 ASP ILE ALA PHE VAL PRO GLU ARG TRP LYS LYS VAL ASN SEQRES 31 B 862 MET ASP TRP LEU GLU ASN VAL LYS ASP TRP ASN ILE SER SEQRES 32 B 862 ARG GLN LEU TRP TRP GLY HIS GLN ILE PRO ALA TRP TYR SEQRES 33 B 862 CYS GLU ASP CYS GLN ALA VAL ASN VAL PRO ARG PRO GLU SEQRES 34 B 862 ARG TYR LEU GLU ASP PRO THR SER CYS GLU ALA CYS GLY SEQRES 35 B 862 SER PRO ARG LEU LYS ARG ASP GLU ASP VAL PHE ASP THR SEQRES 36 B 862 TRP PHE SER SER ALA LEU TRP PRO LEU SER THR LEU GLY SEQRES 37 B 862 TRP PRO GLU GLU THR GLU ASP LEU LYS ALA PHE TYR PRO SEQRES 38 B 862 GLY ASP VAL LEU VAL THR GLY TYR ASP ILE LEU PHE LEU SEQRES 39 B 862 TRP VAL SER ARG MET GLU VAL SER GLY TYR HIS PHE MET SEQRES 40 B 862 GLY GLU ARG PRO PHE LYS THR VAL LEU LEU HIS GLY LEU SEQRES 41 B 862 VAL LEU ASP GLU LYS GLY GLN LYS MET SER LYS SER LYS SEQRES 42 B 862 GLY ASN VAL ILE ASP PRO LEU GLU MET VAL GLU ARG TYR SEQRES 43 B 862 GLY ALA ASP ALA LEU ARG PHE ALA LEU ILE TYR LEU ALA SEQRES 44 B 862 THR GLY GLY GLN ASP ILE ARG LEU ASP LEU ARG TRP LEU SEQRES 45 B 862 GLU MET ALA ARG ASN PHE ALA ASN LYS LEU TYR ASN ALA SEQRES 46 B 862 ALA ARG PHE VAL LEU LEU SER ARG GLU GLY PHE GLN ALA SEQRES 47 B 862 LYS GLU ASP THR PRO THR LEU ALA ASP ARG PHE MET ARG SEQRES 48 B 862 SER ARG LEU SER ARG GLY VAL GLU GLU ILE THR ALA LEU SEQRES 49 B 862 TYR GLU ALA LEU ASP LEU ALA GLN ALA ALA ARG GLU VAL SEQRES 50 B 862 TYR GLU LEU VAL TRP SER GLU PHE CYS ASP TRP TYR LEU SEQRES 51 B 862 GLU ALA ALA LYS PRO ALA LEU LYS ALA GLY ASN ALA HIS SEQRES 52 B 862 THR LEU ARG THR LEU GLU GLU VAL LEU ALA VAL LEU LEU SEQRES 53 B 862 LYS LEU LEU HIS PRO MET MET PRO PHE LEU THR SER GLU SEQRES 54 B 862 LEU TYR GLN ALA LEU THR GLY LYS GLU GLU LEU ALA LEU SEQRES 55 B 862 GLU ALA TRP PRO GLU PRO GLY GLY ARG ASP GLU GLU ALA SEQRES 56 B 862 GLU ARG ALA PHE GLU ALA LEU LYS GLN ALA VAL THR ALA SEQRES 57 B 862 VAL ARG ALA LEU LYS ALA GLU ALA GLY LEU PRO PRO ALA SEQRES 58 B 862 GLN GLU VAL ARG VAL TYR LEU GLU GLY GLU THR ALA PRO SEQRES 59 B 862 VAL GLU GLU ASN LEU GLU VAL PHE ARG PHE LEU SER ARG SEQRES 60 B 862 ALA ASP LEU LEU PRO GLU ARG PRO ALA LYS ALA LEU VAL SEQRES 61 B 862 LYS ALA MET PRO ARG VAL THR ALA ARG MET PRO LEU GLU SEQRES 62 B 862 GLY LEU LEU ASP VAL GLU GLU TRP ARG ARG ARG GLN GLU SEQRES 63 B 862 LYS ARG LEU LYS GLU LEU LEU ALA LEU ALA GLU ARG SER SEQRES 64 B 862 GLN ARG LYS LEU ALA SER PRO GLY PHE ARG GLU LYS ALA SEQRES 65 B 862 PRO LYS GLU VAL VAL GLU ALA GLU GLU ALA ARG LEU LYS SEQRES 66 B 862 GLU ASN LEU GLU GLN ALA GLU ARG ILE ARG GLU ALA LEU SEQRES 67 B 862 SER GLN ILE GLY
CRYST1 186.562 207.328 59.235 90.00 90.00 90.00 P 21 21 2 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.005360 0.000000 0.000000 0.00000
SCALE2 0.000000 0.004823 0.000000 0.00000
SCALE3 0.000000 0.000000 0.016882 0.00000