10 20 30 40 50 60 70 80 1IXR - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER HYDROLASE 04-JUL-02 1IXR
TITLE RUVA-RUVB COMPLEX
COMPND MOL_ID: 1; COMPND 2 MOLECULE: HOLLIDAY JUNCTION DNA HELICASE RUVA; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: RUVB; COMPND 7 CHAIN: C; COMPND 8 FRAGMENT: RESIDUES 1-312; COMPND 9 EC: 3.6.1.3; COMPND 10 ENGINEERED: YES; COMPND 11 MUTATION: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; SOURCE 3 ORGANISM_TAXID: 274; SOURCE 4 GENE: RUVA; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PTRA127; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; SOURCE 12 ORGANISM_TAXID: 274; SOURCE 13 GENE: RUVB; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 15 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 16 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 17 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 18 EXPRESSION_SYSTEM_PLASMID: PET11A
KEYWDS HETEROOLIGOMERIC COMPLEX, OCTAMERIC RUVA, AAA-ATPASE DOMAIN, KEYWDS 2 COMPLEX WITH NUCLEOTIDE, HYDROLASE
EXPDTA X-RAY DIFFRACTION
AUTHOR K.YAMADA,T.MIYATA,D.TSUCHIYA,T.OYAMA,Y.FUJIWARA,T.OHNISHI, AUTHOR 2 H.IWASAKI,H.SHINAGAWA,M.ARIYOSHI,K.MAYANAGI,K.MORIKAWA
REVDAT 2 24-FEB-09 1IXR 1 VERSN REVDAT 1 06-NOV-02 1IXR 0
JRNL AUTH K.YAMADA,T.MIYATA,D.TSUCHIYA,T.OYAMA,Y.FUJIWARA, JRNL AUTH 2 T.OHNISHI,H.IWASAKI,H.SHINAGAWA,M.ARIYOSHI, JRNL AUTH 3 K.MAYANAGI,K.MORIKAWA JRNL TITL CRYSTAL STRUCTURE OF THE RUVA-RUVB COMPLEX: A JRNL TITL 2 STRUCTURAL BASIS FOR THE HOLLIDAY JUNCTION JRNL TITL 3 MIGRATING MOTOR MACHINERY JRNL REF MOL.CELL V. 10 671 2002 JRNL REFN ISSN 1097-2765 JRNL PMID 12408833 JRNL DOI 10.1016/S1097-2765(02)00641-X
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. 3.30 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 12.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 3.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 89.4 REMARK 3 NUMBER OF REFLECTIONS : 20005 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.268 REMARK 3 FREE R VALUE : 0.335 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 965 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.42 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 70.20 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.3710 REMARK 3 BIN FREE R VALUE : 0.3930 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 91 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4873 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 31 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.43 REMARK 3 ESD FROM SIGMAA (A) : 0.46 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.58 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.52 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 1.72 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : ISOTROPIC REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1IXR COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 15-JUL-02. REMARK 100 THE RCSB ID CODE IS RCSB005382.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-JAN-02 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL38B1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24710 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.200 REMARK 200 RESOLUTION RANGE LOW (A) : 44.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.05900 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 28.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.31 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.6 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.47400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 74.82 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.88 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NACL, ETHANOL, PH 8.0, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 30.79050 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 97.55650 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 123.12200 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 30.79050 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 97.55650 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 123.12200 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 30.79050 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 97.55650 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 123.12200 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 30.79050 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 97.55650 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 123.12200 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS REMARK 300 GENERATED BY THE 222 REMARK 300 CRYSTALLOGRAPHIC SYMMETRY REMARK 300 AT THE ORIGIN: (-X,-Y,Z), REMARK 300 (X,-Y,-Z), AND (-X,Y,-Z).
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DODECAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 4 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 0.00000
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU A 136 REMARK 465 ALA A 137 REMARK 465 GLY A 138 REMARK 465 GLU A 139 REMARK 465 LYS A 140 REMARK 465 VAL A 141 REMARK 465 GLU A 142 REMARK 465 SER A 143 REMARK 465 GLU A 144 REMARK 465 ALA A 145 REMARK 465 ALA A 146 REMARK 465 GLU A 147 REMARK 465 GLU A 148 REMARK 465 ALA A 149 REMARK 465 VAL A 150 REMARK 465 MET A 151 REMARK 465 ALA A 152 REMARK 465 LEU A 153 REMARK 465 ALA A 154 REMARK 465 ALA A 155 REMARK 465 LEU A 156 REMARK 465 GLY A 157 REMARK 465 PHE A 158 REMARK 465 LYS A 159 REMARK 465 GLU A 160 REMARK 465 ALA A 161 REMARK 465 GLN A 162 REMARK 465 ALA A 163 REMARK 465 ARG A 164 REMARK 465 ALA A 165 REMARK 465 VAL A 166 REMARK 465 VAL A 167 REMARK 465 LEU A 168 REMARK 465 ASP A 169 REMARK 465 LEU A 170 REMARK 465 LEU A 171 REMARK 465 ALA A 172 REMARK 465 GLN A 173 REMARK 465 ASN A 174 REMARK 465 PRO A 175 REMARK 465 LYS A 176 REMARK 465 ALA A 177 REMARK 465 ARG A 178 REMARK 465 ALA A 179 REMARK 465 GLN A 180 REMARK 465 ASP A 181 REMARK 465 LEU A 182 REMARK 465 ILE A 183 REMARK 465 LYS A 184 REMARK 465 GLU A 185 REMARK 465 ALA A 186 REMARK 465 LEU A 187 REMARK 465 LYS A 188 REMARK 465 ARG A 189 REMARK 465 LEU A 190 REMARK 465 ARG A 191 REMARK 465 MET C 1 REMARK 465 GLU C 2 REMARK 465 ASP C 3 REMARK 465 LEU C 4
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLY A 79 N - CA - C ANGL. DEV. = -18.8 DEGREES REMARK 500 PRO B 132 C - N - CA ANGL. DEV. = 22.8 DEGREES REMARK 500 PRO B 132 C - N - CD ANGL. DEV. = -31.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 11 105.92 -170.24 REMARK 500 GLU A 13 -30.99 -161.15 REMARK 500 ALA A 14 -61.07 -179.80 REMARK 500 PRO A 33 -74.02 -45.78 REMARK 500 LEU A 38 118.01 -39.91 REMARK 500 VAL A 44 145.06 -176.96 REMARK 500 GLU A 55 -74.83 -58.07 REMARK 500 LEU A 57 159.05 -43.51 REMARK 500 GLU A 66 -74.32 -55.37 REMARK 500 VAL A 77 -75.45 -141.97 REMARK 500 SER A 78 -45.08 178.55 REMARK 500 LYS A 83 -73.28 -65.46 REMARK 500 LEU A 97 -71.12 -54.46 REMARK 500 LEU A 101 -72.66 -44.91 REMARK 500 ARG A 107 21.72 -64.85 REMARK 500 LEU A 108 -61.81 -144.27 REMARK 500 LEU A 109 -45.40 -28.06 REMARK 500 ARG A 118 -70.21 -37.96 REMARK 500 ARG A 122 38.54 -96.63 REMARK 500 HIS A 134 69.39 -39.12 REMARK 500 LEU B 10 -49.48 1.44 REMARK 500 PRO B 33 -71.15 -40.17 REMARK 500 LEU B 50 174.13 -59.23 REMARK 500 LEU B 51 107.53 -174.52 REMARK 500 LEU B 52 -174.02 -64.57 REMARK 500 LYS B 53 -161.56 -171.44 REMARK 500 GLU B 72 -74.39 -67.56 REMARK 500 LEU B 73 -53.54 -27.97 REMARK 500 ALA B 87 -70.05 -43.86 REMARK 500 ALA B 91 -94.59 -78.91 REMARK 500 SER B 111 67.59 -66.14 REMARK 500 ALA B 112 135.86 174.59 REMARK 500 SER B 113 145.28 -32.26 REMARK 500 VAL B 115 97.93 -45.13 REMARK 500 ARG B 117 -83.29 -65.75 REMARK 500 ILE B 123 -32.30 -39.26 REMARK 500 ALA B 124 -73.92 -78.15 REMARK 500 LEU B 125 -38.96 -39.89 REMARK 500 LYS B 130 -1.57 -58.86 REMARK 500 PRO B 132 146.23 -172.53 REMARK 500 PRO B 133 -99.99 -71.26 REMARK 500 LEU B 135 26.39 -151.79 REMARK 500 GLU B 142 -117.24 -77.73 REMARK 500 GLU B 144 84.22 -63.15 REMARK 500 ALA B 145 -37.41 -37.71 REMARK 500 ALA B 146 -79.01 -55.91 REMARK 500 ALA B 149 -72.56 -57.12 REMARK 500 PHE B 158 120.51 -12.65 REMARK 500 GLU B 160 -82.82 -24.98 REMARK 500 ALA B 172 -78.43 -68.18 REMARK 500 ALA B 177 86.89 -161.54 REMARK 500 GLN B 180 -85.67 -48.49 REMARK 500 LYS B 184 -74.97 -41.03 REMARK 500 GLU B 185 -15.20 -36.70 REMARK 500 PRO C 8 97.61 -61.52 REMARK 500 GLN C 17 159.07 -34.33 REMARK 500 ARG C 19 -60.86 -94.37 REMARK 500 LEU C 24 -40.68 -132.24 REMARK 500 ALA C 31 12.65 -69.08 REMARK 500 LYS C 32 10.66 -145.36 REMARK 500 ARG C 34 -71.97 -145.86 REMARK 500 LYS C 35 -152.79 -153.64 REMARK 500 GLU C 39 140.38 -15.35 REMARK 500 PHE C 44 -163.39 -112.35 REMARK 500 PRO C 47 -175.70 -50.92 REMARK 500 LEU C 49 -27.95 -19.24 REMARK 500 LYS C 51 -68.07 -120.82 REMARK 500 THR C 52 -71.03 -50.86 REMARK 500 THR C 53 -19.89 -43.74 REMARK 500 GLU C 61 38.97 -89.30 REMARK 500 LEU C 62 -37.69 -148.66 REMARK 500 ASN C 65 -175.66 -61.77 REMARK 500 PRO C 72 -18.45 -36.32 REMARK 500 ALA C 73 34.65 -76.18 REMARK 500 GLU C 75 -77.23 -90.79 REMARK 500 PRO C 77 -6.60 -51.27 REMARK 500 ASN C 86 101.02 59.16 REMARK 500 SER C 87 -7.03 174.06 REMARK 500 LEU C 88 -166.78 -105.84 REMARK 500 GLU C 89 44.03 -153.11 REMARK 500 ASP C 92 152.81 -36.69 REMARK 500 ARG C 101 78.00 -108.56 REMARK 500 ARG C 104 -37.79 -39.70 REMARK 500 HIS C 109 42.03 -79.65 REMARK 500 ALA C 113 9.89 -69.34 REMARK 500 MET C 114 -69.52 -94.00 REMARK 500 ASP C 116 -74.31 -156.18 REMARK 500 PHE C 117 29.85 -175.96 REMARK 500 MET C 119 57.20 -164.39 REMARK 500 ALA C 128 150.19 -38.69 REMARK 500 ALA C 129 -131.84 -97.97 REMARK 500 ARG C 130 -132.89 -81.12 REMARK 500 THR C 131 123.51 -170.43 REMARK 500 LEU C 134 -120.02 -114.82 REMARK 500 GLU C 135 48.27 177.40 REMARK 500 ARG C 147 75.57 -151.47 REMARK 500 ALA C 153 175.11 -32.56 REMARK 500 PRO C 154 -10.35 -42.76 REMARK 500 THR C 169 147.04 1.45 REMARK 500 VAL C 177 -39.43 -32.00 REMARK 500 ARG C 182 74.96 -107.77 REMARK 500 LEU C 183 -95.26 -119.11 REMARK 500 GLU C 190 -84.12 -60.64 REMARK 500 SER C 200 79.18 -105.34 REMARK 500 ARG C 201 67.18 -33.19 REMARK 500 VAL C 206 5.81 -69.66 REMARK 500 LYS C 208 -17.26 -140.06 REMARK 500 ARG C 215 -71.83 -44.88 REMARK 500 ALA C 218 -92.11 -53.99 REMARK 500 GLN C 219 52.03 -62.51 REMARK 500 VAL C 220 -20.34 -148.16 REMARK 500 GLU C 224 -61.40 -14.60 REMARK 500 VAL C 225 150.95 -40.98 REMARK 500 ARG C 228 0.29 -52.44 REMARK 500 GLU C 233 -77.38 -85.88 REMARK 500 ALA C 234 21.47 -67.94 REMARK 500 ALA C 237 -108.11 -86.33 REMARK 500 LEU C 240 57.93 37.20 REMARK 500 ASP C 241 145.45 176.94 REMARK 500 GLU C 242 -124.26 -83.77 REMARK 500 LEU C 245 118.93 -23.31 REMARK 500 LYS C 247 -81.64 8.89 REMARK 500 ILE C 252 -71.02 -41.40 REMARK 500 VAL C 265 -68.76 -121.04 REMARK 500 LEU C 267 -41.32 -28.55 REMARK 500 ALA C 268 -89.05 -36.93 REMARK 500 THR C 269 -74.79 -55.63 REMARK 500 LEU C 270 -55.56 -29.33 REMARK 500 LEU C 281 -85.76 -70.55 REMARK 500 GLU C 282 -18.44 -44.56 REMARK 500 HIS C 285 -63.18 -145.28 REMARK 500 GLU C 286 -34.55 -39.49 REMARK 500 PRO C 287 -91.84 -44.53 REMARK 500 LEU C 289 -78.89 -38.04 REMARK 500 ARG C 291 45.11 -69.66 REMARK 500 GLN C 292 71.14 -178.61 REMARK 500 LEU C 294 -72.81 -144.28 REMARK 500 PRO C 299 -9.54 -53.38 REMARK 500 LEU C 307 -0.38 -50.59 REMARK 500 ARG C 309 -70.68 -53.97 REMARK 500 REMARK 500 REMARK: NULL
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ANP C 313
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1HQC RELATED DB: PDB REMARK 900 1HQC CONTAINS RUVB ALONE. REMARK 900 RELATED ID: 1IXS RELATED DB: PDB REMARK 900 1IXS CONTAINS RUVB COMPLEXED WITH RUVA DOMAIN III.
DBREF 1IXR A 1 191 UNP Q9F1Q3 RUVA_THET8 1 191 DBREF 1IXR B 1 191 UNP Q9F1Q3 RUVA_THET8 1 191 DBREF 1IXR C 1 312 UNP Q5SL87 RUVB_THET8 1 312
SEQADV 1IXR ARG C 309 UNP Q5SL87 TYR 309 ENGINEERED
SEQRES 1 A 191 MET ILE ARG TYR LEU ARG GLY LEU VAL LEU LYS LYS GLU SEQRES 2 A 191 ALA GLY GLY PHE VAL LEU LEU ALA GLY GLY VAL GLY PHE SEQRES 3 A 191 PHE LEU GLN ALA PRO THR PRO PHE LEU GLN ALA LEU GLU SEQRES 4 A 191 GLU GLY LYS GLU VAL GLY VAL HIS THR HIS LEU LEU LEU SEQRES 5 A 191 LYS GLU GLU GLY LEU SER LEU TYR GLY PHE PRO ASP GLU SEQRES 6 A 191 GLU ASN LEU ALA LEU PHE GLU LEU LEU LEU SER VAL SER SEQRES 7 A 191 GLY VAL GLY PRO LYS VAL ALA LEU ALA LEU LEU SER ALA SEQRES 8 A 191 LEU PRO PRO ARG LEU LEU ALA ARG ALA LEU LEU GLU GLY SEQRES 9 A 191 ASP ALA ARG LEU LEU THR SER ALA SER GLY VAL GLY ARG SEQRES 10 A 191 ARG LEU ALA GLU ARG ILE ALA LEU GLU LEU LYS GLY LYS SEQRES 11 A 191 VAL PRO PRO HIS LEU LEU ALA GLY GLU LYS VAL GLU SER SEQRES 12 A 191 GLU ALA ALA GLU GLU ALA VAL MET ALA LEU ALA ALA LEU SEQRES 13 A 191 GLY PHE LYS GLU ALA GLN ALA ARG ALA VAL VAL LEU ASP SEQRES 14 A 191 LEU LEU ALA GLN ASN PRO LYS ALA ARG ALA GLN ASP LEU SEQRES 15 A 191 ILE LYS GLU ALA LEU LYS ARG LEU ARG SEQRES 1 B 191 MET ILE ARG TYR LEU ARG GLY LEU VAL LEU LYS LYS GLU SEQRES 2 B 191 ALA GLY GLY PHE VAL LEU LEU ALA GLY GLY VAL GLY PHE SEQRES 3 B 191 PHE LEU GLN ALA PRO THR PRO PHE LEU GLN ALA LEU GLU SEQRES 4 B 191 GLU GLY LYS GLU VAL GLY VAL HIS THR HIS LEU LEU LEU SEQRES 5 B 191 LYS GLU GLU GLY LEU SER LEU TYR GLY PHE PRO ASP GLU SEQRES 6 B 191 GLU ASN LEU ALA LEU PHE GLU LEU LEU LEU SER VAL SER SEQRES 7 B 191 GLY VAL GLY PRO LYS VAL ALA LEU ALA LEU LEU SER ALA SEQRES 8 B 191 LEU PRO PRO ARG LEU LEU ALA ARG ALA LEU LEU GLU GLY SEQRES 9 B 191 ASP ALA ARG LEU LEU THR SER ALA SER GLY VAL GLY ARG SEQRES 10 B 191 ARG LEU ALA GLU ARG ILE ALA LEU GLU LEU LYS GLY LYS SEQRES 11 B 191 VAL PRO PRO HIS LEU LEU ALA GLY GLU LYS VAL GLU SER SEQRES 12 B 191 GLU ALA ALA GLU GLU ALA VAL MET ALA LEU ALA ALA LEU SEQRES 13 B 191 GLY PHE LYS GLU ALA GLN ALA ARG ALA VAL VAL LEU ASP SEQRES 14 B 191 LEU LEU ALA GLN ASN PRO LYS ALA ARG ALA GLN ASP LEU SEQRES 15 B 191 ILE LYS GLU ALA LEU LYS ARG LEU ARG SEQRES 1 C 312 MET GLU ASP LEU ALA LEU ARG PRO LYS THR LEU ASP GLU SEQRES 2 C 312 TYR ILE GLY GLN GLU ARG LEU LYS GLN LYS LEU ARG VAL SEQRES 3 C 312 TYR LEU GLU ALA ALA LYS ALA ARG LYS GLU PRO LEU GLU SEQRES 4 C 312 HIS LEU LEU LEU PHE GLY PRO PRO GLY LEU GLY LYS THR SEQRES 5 C 312 THR LEU ALA HIS VAL ILE ALA HIS GLU LEU GLY VAL ASN SEQRES 6 C 312 LEU ARG VAL THR SER GLY PRO ALA ILE GLU LYS PRO GLY SEQRES 7 C 312 ASP LEU ALA ALA ILE LEU ALA ASN SER LEU GLU GLU GLY SEQRES 8 C 312 ASP ILE LEU PHE ILE ASP GLU ILE HIS ARG LEU SER ARG SEQRES 9 C 312 GLN ALA GLU GLU HIS LEU TYR PRO ALA MET GLU ASP PHE SEQRES 10 C 312 VAL MET ASP ILE VAL ILE GLY GLN GLY PRO ALA ALA ARG SEQRES 11 C 312 THR ILE ARG LEU GLU LEU PRO ARG PHE THR LEU ILE GLY SEQRES 12 C 312 ALA THR THR ARG PRO GLY LEU ILE THR ALA PRO LEU LEU SEQRES 13 C 312 SER ARG PHE GLY ILE VAL GLU HIS LEU GLU TYR TYR THR SEQRES 14 C 312 PRO GLU GLU LEU ALA GLN GLY VAL MET ARG ASP ALA ARG SEQRES 15 C 312 LEU LEU GLY VAL ARG ILE THR GLU GLU ALA ALA LEU GLU SEQRES 16 C 312 ILE GLY ARG ARG SER ARG GLY THR MET ARG VAL ALA LYS SEQRES 17 C 312 ARG LEU PHE ARG ARG VAL ARG ASP PHE ALA GLN VAL ALA SEQRES 18 C 312 GLY GLU GLU VAL ILE THR ARG GLU ARG ALA LEU GLU ALA SEQRES 19 C 312 LEU ALA ALA LEU GLY LEU ASP GLU LEU GLY LEU GLU LYS SEQRES 20 C 312 ARG ASP ARG GLU ILE LEU GLU VAL LEU ILE LEU ARG PHE SEQRES 21 C 312 GLY GLY GLY PRO VAL GLY LEU ALA THR LEU ALA THR ALA SEQRES 22 C 312 LEU SER GLU ASP PRO GLY THR LEU GLU GLU VAL HIS GLU SEQRES 23 C 312 PRO TYR LEU ILE ARG GLN GLY LEU LEU LYS ARG THR PRO SEQRES 24 C 312 ARG GLY ARG VAL ALA THR GLU LEU ALA ARG ARG HIS LEU
HET ANP C 313 31
HETNAM ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
FORMUL 4 ANP C10 H17 N6 O12 P3
HELIX 1 1 PRO A 31 LEU A 38 1 8 HELIX 2 2 ASP A 64 SER A 76 1 13 HELIX 3 3 GLY A 81 LEU A 92 1 12 HELIX 4 4 PRO A 93 GLU A 103 1 11 HELIX 5 5 ASP A 105 THR A 110 1 6 HELIX 6 6 GLY A 116 LYS A 128 1 13 HELIX 7 7 PRO B 31 ALA B 37 1 7 HELIX 8 8 ASP B 64 VAL B 77 1 14 HELIX 9 9 GLY B 81 LEU B 92 1 12 HELIX 10 10 PRO B 93 GLY B 104 1 12 HELIX 11 11 ASP B 105 SER B 111 1 7 HELIX 12 12 GLY B 116 LYS B 128 1 13 HELIX 13 13 GLU B 144 LEU B 156 1 13 HELIX 14 14 LYS B 159 ASN B 174 1 16 HELIX 15 15 ARG B 178 LEU B 190 1 13 HELIX 16 16 GLU C 18 LYS C 23 1 6 HELIX 17 17 GLU C 29 ALA C 33 5 5 HELIX 18 18 LYS C 51 ALA C 59 1 9 HELIX 19 19 HIS C 60 LEU C 62 5 3 HELIX 20 20 GLY C 78 ALA C 85 1 8 HELIX 21 21 TYR C 111 ASP C 116 1 6 HELIX 22 22 ALA C 153 SER C 157 5 5 HELIX 23 23 THR C 169 ASP C 180 1 12 HELIX 24 24 THR C 189 ARG C 198 1 10 HELIX 25 25 MET C 204 ALA C 207 5 4 HELIX 26 26 LYS C 208 ARG C 215 1 8 HELIX 27 27 PHE C 217 ALA C 221 5 5 HELIX 28 28 GLU C 229 ALA C 237 1 9 HELIX 29 29 LYS C 247 LEU C 258 1 12 HELIX 30 30 GLY C 266 LEU C 274 1 9 HELIX 31 31 ASP C 277 HIS C 285 1 9 HELIX 32 32 HIS C 285 ARG C 291 1 7 HELIX 33 33 THR C 305 ARG C 310 1 6
SHEET 1 A12 GLU B 43 HIS B 47 0 SHEET 2 A12 ILE B 2 LYS B 12 -1 O LEU B 5 N VAL B 46 SHEET 3 A12 VAL A 24 GLN A 29 -1 O GLY A 25 N ARG B 3 SHEET 4 A12 GLY A 16 LEU A 20 -1 O PHE A 17 N LEU A 28 SHEET 5 A12 TYR A 4 LYS A 12 -1 O LEU A 8 N LEU A 20 SHEET 6 A12 GLU A 43 THR A 48 -1 O VAL A 44 N GLY A 7 SHEET 7 A12 LEU A 59 PHE A 62 -1 N PHE A 62 O HIS A 47 SHEET 8 A12 VAL A 24 GLN A 29 1 O PHE A 27 N LEU A 59 SHEET 9 A12 ILE B 2 LYS B 12 -1 N ARG B 3 O GLY A 25 SHEET 10 A12 GLY B 16 ALA B 21 -1 N VAL B 18 O LYS B 11 SHEET 11 A12 VAL B 24 GLN B 29 -1 N VAL B 24 O ALA B 21 SHEET 12 A12 LEU B 59 TYR B 60 1 O LEU B 59 N GLN B 29 SHEET 1 B 5 LEU C 66 SER C 70 0 SHEET 2 B 5 ILE C 93 ASP C 97 1 O ILE C 93 N ARG C 67 SHEET 3 B 5 THR C 140 ALA C 144 1 O THR C 140 N LEU C 94 SHEET 4 B 5 LEU C 41 LEU C 43 1 N LEU C 41 O LEU C 141 SHEET 5 B 5 ILE C 161 GLU C 163 1 O ILE C 161 N LEU C 42 SHEET 1 C 2 ILE C 121 VAL C 122 0 SHEET 2 C 2 THR C 131 ILE C 132 -1 O ILE C 132 N ILE C 121 SHEET 1 D 2 LEU C 295 THR C 298 0 SHEET 2 D 2 GLY C 301 ALA C 304 -1 N GLY C 301 O THR C 298
CISPEP 1 VAL B 131 PRO B 132 0 -0.90 CISPEP 2 GLY C 126 PRO C 127 0 -0.24
SITE 1 AC1 11 ARG C 7 TYR C 14 ILE C 15 GLY C 48 SITE 2 AC1 11 GLY C 50 LYS C 51 THR C 52 THR C 53 SITE 3 AC1 11 MET C 204 ARG C 205 LYS C 208
CRYST1 61.581 195.113 246.244 90.00 90.00 90.00 I 2 2 2 16
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.016239 0.000000 0.000000 0.00000
SCALE2 0.000000 0.005125 0.000000 0.00000
SCALE3 0.000000 0.000000 0.004061 0.00000