10 20 30 40 50 60 70 80 1IV0 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 08-MAR-02 1IV0
TITLE SOLUTION STRUCTURE OF THE YQGF-FAMILY PROTEIN (N-TERMINAL TITLE 2 FRAGMENT)
COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: N-TERMINAL FRAGMENT; COMPND 5 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; SOURCE 3 ORGANISM_TAXID: 274; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET15B
KEYWDS HYPOTHETICAL PROTEIN, RNASEH-LIKE, YQGF, STRUCTURAL KEYWDS 2 GENOMICS, RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, KEYWDS 3 RSGI, UNKNOWN FUNCTION
EXPDTA SOLUTION NMR
NUMMDL 10
AUTHOR M.INOUE,T.KIGAWA,S.KURAMITSU,S.YOKOYAMA,RIKEN STRUCTURAL AUTHOR 2 GENOMICS/PROTEOMICS INITIATIVE (RSGI)
REVDAT 2 24-FEB-09 1IV0 1 VERSN REVDAT 1 07-OCT-03 1IV0 0
JRNL AUTH M.INOUE,T.KIGAWA,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE YQGF-FAMILY PROTEIN JRNL TITL 2 (N-TERMINAL FRAGMENT) JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1IV0 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 14-MAR-02. REMARK 100 THE RCSB ID CODE IS RCSB005301.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 328 REMARK 210 PH : 6.0 REMARK 210 IONIC STRENGTH : 100MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1MM PROTEIN U-15N, 13C; 20MM REMARK 210 SODIUM PHOSPHATE BUFFER; 100MM REMARK 210 NACL; 90% H2O, 10% D2O; 1MM REMARK 210 PROTEIN U-15N; 20MM SODIUM REMARK 210 PHOSPHATE BUFFER; 100MM NACL; REMARK 210 90% H2O, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY, 3D_ REMARK 210 15N-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ, 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 1.8, CNS 1.0 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS, REMARK 210 SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE NMR REMARK 210 SPECTROSCOPY.
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 GLU A 10 34.65 178.16 REMARK 500 1 ALA A 11 -48.04 168.53 REMARK 500 1 LEU A 24 -70.98 -64.52 REMARK 500 1 ALA A 25 -42.17 170.66 REMARK 500 1 SER A 26 137.66 60.19 REMARK 500 1 ARG A 28 -43.12 179.17 REMARK 500 1 TYR A 30 150.05 179.96 REMARK 500 1 LYS A 34 -149.79 -137.23 REMARK 500 1 LYS A 54 130.97 178.19 REMARK 500 1 LEU A 61 126.99 62.00 REMARK 500 1 THR A 63 126.70 69.19 REMARK 500 1 ASP A 64 138.37 178.48 REMARK 500 1 GLU A 67 145.81 61.92 REMARK 500 1 SER A 68 -150.73 -162.60 REMARK 500 1 ALA A 71 135.38 60.76 REMARK 500 1 LYS A 73 49.38 -86.82 REMARK 500 1 ASP A 92 -149.88 -71.10 REMARK 500 1 THR A 96 129.30 -176.04 REMARK 500 2 GLU A 10 105.79 -178.65 REMARK 500 2 ALA A 25 135.26 76.52 REMARK 500 2 SER A 26 131.14 179.76 REMARK 500 2 ARG A 28 -44.12 -155.33 REMARK 500 2 TYR A 30 140.92 -179.72 REMARK 500 2 LYS A 34 -153.21 -150.49 REMARK 500 2 THR A 35 -158.60 -86.78 REMARK 500 2 LYS A 54 127.05 -178.30 REMARK 500 2 ASP A 64 -170.75 45.35 REMARK 500 2 ALA A 71 -135.10 53.20 REMARK 500 2 LYS A 73 31.87 -158.79 REMARK 500 2 ASP A 92 36.20 -174.35 REMARK 500 2 ARG A 94 37.27 -156.55 REMARK 500 2 PHE A 95 131.46 60.34 REMARK 500 3 LEU A 24 127.29 61.80 REMARK 500 3 SER A 26 137.41 66.71 REMARK 500 3 TYR A 30 150.47 179.79 REMARK 500 3 LYS A 34 -120.30 -128.05 REMARK 500 3 LEU A 36 -68.83 0.08 REMARK 500 3 THR A 63 46.11 -82.20 REMARK 500 3 LEU A 65 46.69 -80.53 REMARK 500 3 LYS A 66 31.54 -95.63 REMARK 500 3 SER A 68 -46.76 -177.79 REMARK 500 3 GLN A 70 134.50 -171.34 REMARK 500 3 LYS A 73 28.91 -154.46 REMARK 500 3 ASP A 92 126.34 68.03 REMARK 500 3 THR A 96 -41.87 -165.89 REMARK 500 3 THR A 97 -54.27 72.26 REMARK 500 4 ALA A 11 -52.85 75.54 REMARK 500 4 LEU A 24 125.63 60.89 REMARK 500 4 ALA A 25 40.50 175.45 REMARK 500 4 LYS A 34 -155.41 -147.97 REMARK 500 4 THR A 35 -158.39 -97.13 REMARK 500 4 PRO A 60 -161.16 -74.65 REMARK 500 4 ASP A 64 130.61 179.50 REMARK 500 4 LYS A 66 120.85 178.54 REMARK 500 4 GLU A 67 132.85 59.93 REMARK 500 4 ASP A 92 -118.12 -62.55 REMARK 500 4 GLU A 93 138.74 -176.85 REMARK 500 4 ARG A 94 138.16 51.70 REMARK 500 4 THR A 96 -41.63 -165.75 REMARK 500 5 PRO A 23 54.97 -69.39 REMARK 500 5 LEU A 24 -41.97 -175.93 REMARK 500 5 ALA A 25 137.30 64.97 REMARK 500 5 SER A 26 130.88 63.91 REMARK 500 5 ARG A 28 -45.23 -157.32 REMARK 500 5 TYR A 30 140.35 179.95 REMARK 500 5 LYS A 34 -121.94 -144.79 REMARK 500 5 LEU A 36 -69.28 5.83 REMARK 500 5 LYS A 54 128.82 -178.36 REMARK 500 5 LEU A 61 121.33 62.30 REMARK 500 5 THR A 63 -133.28 50.53 REMARK 500 5 GLU A 67 -40.16 -158.59 REMARK 500 5 SER A 68 -145.97 65.82 REMARK 500 5 GLN A 70 103.19 63.63 REMARK 500 5 ALA A 71 142.40 178.74 REMARK 500 5 ASP A 92 135.52 67.05 REMARK 500 5 GLU A 93 127.11 -178.28 REMARK 500 5 ARG A 94 40.04 -172.36 REMARK 500 5 THR A 96 136.54 178.18 REMARK 500 6 ALA A 11 32.85 -168.15 REMARK 500 6 LEU A 24 -42.07 -168.83 REMARK 500 6 ALA A 25 -42.20 -175.91 REMARK 500 6 SER A 26 127.16 63.44 REMARK 500 6 ARG A 28 -47.59 -158.03 REMARK 500 6 TYR A 30 141.10 179.82 REMARK 500 6 LYS A 34 -125.75 -147.17 REMARK 500 6 LEU A 36 -72.02 5.27 REMARK 500 6 LEU A 61 -157.20 69.83 REMARK 500 6 ARG A 62 -153.78 44.60 REMARK 500 6 ASP A 64 48.03 -76.55 REMARK 500 6 ALA A 71 -55.98 70.13 REMARK 500 6 GLU A 89 123.70 -171.86 REMARK 500 6 ASP A 92 133.83 -178.13 REMARK 500 6 ARG A 94 134.04 -177.45 REMARK 500 6 PHE A 95 137.44 63.01 REMARK 500 7 PRO A 23 37.72 -83.75 REMARK 500 7 LEU A 24 -42.60 -161.80 REMARK 500 7 ALA A 25 125.98 69.46 REMARK 500 7 ARG A 28 -43.37 -132.08 REMARK 500 7 LYS A 34 -122.55 -146.61 REMARK 500 7 LEU A 36 -43.03 -21.96 REMARK 500 7 LYS A 54 131.42 178.21 REMARK 500 7 GLU A 67 -163.23 -177.62 REMARK 500 7 SER A 68 130.84 56.33 REMARK 500 7 GLN A 70 130.83 -178.24 REMARK 500 7 ALA A 71 -144.15 59.48 REMARK 500 7 GLU A 89 129.66 -172.02 REMARK 500 7 ASP A 92 -40.37 -177.96 REMARK 500 7 ARG A 94 -47.87 -164.41 REMARK 500 7 PHE A 95 130.13 -177.99 REMARK 500 7 THR A 96 42.83 -91.11 REMARK 500 7 THR A 97 133.91 56.33 REMARK 500 8 GLU A 10 -67.98 66.04 REMARK 500 8 ALA A 11 36.30 -176.19 REMARK 500 8 ALA A 25 -138.63 -60.17 REMARK 500 8 SER A 26 122.62 58.45 REMARK 500 8 ARG A 28 -50.66 -151.39 REMARK 500 8 TYR A 30 143.06 -179.81 REMARK 500 8 LYS A 34 -140.75 -138.53 REMARK 500 8 THR A 35 -158.98 -106.16 REMARK 500 8 LYS A 54 125.23 -177.87 REMARK 500 8 LEU A 61 139.93 68.13 REMARK 500 8 LYS A 66 136.23 63.48 REMARK 500 8 ALA A 71 -146.90 59.25 REMARK 500 8 ASP A 92 -43.71 -164.28 REMARK 500 8 GLU A 93 127.32 -175.21 REMARK 500 8 THR A 97 132.26 63.72 REMARK 500 9 ALA A 11 39.16 -171.57 REMARK 500 9 LEU A 24 -51.54 69.69 REMARK 500 9 ALA A 25 137.55 71.10 REMARK 500 9 SER A 26 129.92 -173.71 REMARK 500 9 TYR A 30 138.99 -178.90 REMARK 500 9 LYS A 34 -96.96 -109.09 REMARK 500 9 THR A 35 127.30 -176.03 REMARK 500 9 LEU A 36 -76.03 16.59 REMARK 500 9 PRO A 60 42.03 -81.40 REMARK 500 9 LEU A 61 129.20 179.67 REMARK 500 9 LEU A 65 41.12 -171.24 REMARK 500 9 LYS A 66 146.27 64.75 REMARK 500 9 GLU A 67 -42.65 -154.52 REMARK 500 9 ALA A 69 126.92 62.25 REMARK 500 9 LYS A 73 34.18 -179.39 REMARK 500 9 TRP A 91 159.35 179.90 REMARK 500 9 ASP A 92 -44.23 -151.73 REMARK 500 9 PHE A 95 45.39 -166.01 REMARK 500 9 THR A 96 -143.84 -177.49 REMARK 500 9 THR A 97 133.96 64.07 REMARK 500 10 ALA A 11 40.01 -158.89 REMARK 500 10 PRO A 23 41.21 -84.50 REMARK 500 10 LYS A 34 -125.23 -147.92 REMARK 500 10 LEU A 36 -53.90 -18.28 REMARK 500 10 LEU A 61 159.64 65.64 REMARK 500 10 ARG A 62 42.55 76.10 REMARK 500 10 LYS A 66 -68.00 -178.14 REMARK 500 10 GLU A 67 -54.82 -161.30 REMARK 500 10 ALA A 69 -49.73 175.76 REMARK 500 10 ALA A 71 137.28 179.40 REMARK 500 10 LYS A 73 -19.55 66.56 REMARK 500 10 TRP A 91 148.45 -179.23 REMARK 500 10 ARG A 94 32.70 -161.02 REMARK 500 REMARK 500 REMARK: NULL
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: TTK003001690.1 RELATED DB: TARGETDB
DBREF 1IV0 A 1 98 UNP P83694 P83694_THETH 1 98
SEQRES 1 A 98 MET ARG VAL GLY ALA LEU ASP VAL GLY GLU ALA ARG ILE SEQRES 2 A 98 GLY LEU ALA VAL GLY GLU GLU GLY VAL PRO LEU ALA SER SEQRES 3 A 98 GLY ARG GLY TYR LEU VAL ARG LYS THR LEU GLU GLU ASP SEQRES 4 A 98 VAL GLU ALA LEU LEU ASP PHE VAL ARG ARG GLU GLY LEU SEQRES 5 A 98 GLY LYS LEU VAL VAL GLY LEU PRO LEU ARG THR ASP LEU SEQRES 6 A 98 LYS GLU SER ALA GLN ALA GLY LYS VAL LEU PRO LEU VAL SEQRES 7 A 98 GLU ALA LEU ARG ALA ARG GLY VAL GLU VAL GLU LEU TRP SEQRES 8 A 98 ASP GLU ARG PHE THR THR LYS
HELIX 1 1 THR A 35 GLU A 50 1 16 HELIX 2 2 VAL A 74 ARG A 84 1 11
SHEET 1 A 5 ARG A 28 VAL A 32 0 SHEET 2 A 5 ARG A 12 GLY A 18 -1 N ILE A 13 O LEU A 31 SHEET 3 A 5 VAL A 3 VAL A 8 -1 N ALA A 5 O ALA A 16 SHEET 4 A 5 LYS A 54 GLY A 58 1 O VAL A 56 N GLY A 4 SHEET 5 A 5 GLU A 87 TRP A 91 1 O GLU A 87 N LEU A 55
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000