10 20 30 40 50 60 70 80 1I9R - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER CYTOKINE/IMMUNE SYSTEM 20-MAR-01 1I9R
TITLE STRUCTURE OF CD40L IN COMPLEX WITH THE FAB FRAGMENT OF TITLE 2 HUMANIZED 5C8 ANTIBODY
COMPND MOL_ID: 1; COMPND 2 MOLECULE: CD40 LIGAND; COMPND 3 CHAIN: A, B, C; COMPND 4 FRAGMENT: RESIDUES 116-261; COMPND 5 SYNONYM: CD40-L; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: IMMUNOGLOBULIN H; COMPND 9 CHAIN: H, K, X; COMPND 10 MOL_ID: 3; COMPND 11 MOLECULE: IMMUNOGLOBULIN L; COMPND 12 CHAIN: L, M, Y
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: PICHIA PASTORIS; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 4922; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 9 ORGANISM_COMMON: HUMAN; SOURCE 10 ORGANISM_TAXID: 9606; SOURCE 11 CELL_LINE: NSO MYELOMA; SOURCE 12 MOL_ID: 3; SOURCE 13 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 14 ORGANISM_COMMON: HUMAN; SOURCE 15 ORGANISM_TAXID: 9606; SOURCE 16 CELL_LINE: NSO MYELOMA
KEYWDS BETA-SHEET SANDWICH, IMMUNOGLOBULIN, CYTOKINE/IMMUNE SYSTEM KEYWDS 2 COMPLEX
EXPDTA X-RAY DIFFRACTION
AUTHOR M.KARPUSAS,J.LUCCI,J.FERRANT,C.BENJAMIN,Y.-M.HSU
REVDAT 4 24-FEB-09 1I9R 1 VERSN REVDAT 3 01-APR-03 1I9R 1 JRNL REVDAT 2 22-MAY-02 1I9R 1 SHEET REVDAT 1 20-MAR-02 1I9R 0
JRNL AUTH M.KARPUSAS,J.LUCCI,J.FERRANT,C.BENJAMIN,F.R.TAYLOR, JRNL AUTH 2 K.STRAUCH,E.GARBER,Y.M.HSU JRNL TITL STRUCTURE OF CD40 LIGAND IN COMPLEX WITH THE FAB JRNL TITL 2 FRAGMENT OF A NEUTRALIZING HUMANIZED ANTIBODY. JRNL REF STRUCTURE V. 9 321 2001 JRNL REFN ISSN 0969-2126 JRNL PMID 11525169 JRNL DOI 10.1016/S0969-2126(01)00590-1
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. 3.10 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 98.0 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 71662 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.233 REMARK 3 FREE R VALUE : 0.285 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 2325 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 13167 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 3 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.014 REMARK 3 BOND ANGLES (DEGREES) : 1.89 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: FOR NCS THE FOLLOWING 3 CHAIN GROUPS REMARK 3 WERE USED: A) A, H, L, B) B,K, X C) C, M, Y. THE FINAL RMS REMARK 3 DEVIATION OF MAIN CHAIN ATOMS BETWEEN GROUPS IS 0.18 ANGSTROM.
REMARK 4 REMARK 4 1I9R COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-MAR-01. REMARK 100 THE RCSB ID CODE IS RCSB013082.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-NOV-99 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU200 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IIC REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46508 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.100 REMARK 200 RESOLUTION RANGE LOW (A) : 35.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.1 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.07600 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 7.5200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.21 REMARK 200 COMPLETENESS FOR SHELL (%) : 87.7 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.18800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.970 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 1ALY REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG MME 550, 0.1 M MES, 0.01 M REMARK 280 ZINC SULFATE, PH 6.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 298K
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 112.24000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 64.95500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 112.24000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 64.95500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: NONAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, H, L, K, M, X, Y REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 116 REMARK 465 ASP A 117 REMARK 465 GLN A 118 REMARK 465 GLY B 116 REMARK 465 ASP B 117 REMARK 465 GLN B 118 REMARK 465 GLY C 116 REMARK 465 ASP C 117 REMARK 465 GLN C 118 REMARK 465 GLY L 216 REMARK 465 GLU L 217 REMARK 465 CYS L 218 REMARK 465 GLY M 216 REMARK 465 GLU M 217 REMARK 465 CYS M 218 REMARK 465 GLY Y 216 REMARK 465 GLU Y 217 REMARK 465 CYS Y 218
REMARK 475 REMARK 475 ZERO OCCUPANCY RESIDUES REMARK 475 THE FOLLOWING RESIDUES WERE MODELED WITH ZERO OCCUPANCY. REMARK 475 THE LOCATION AND PROPERTIES OF THESE RESIDUES MAY NOT REMARK 475 BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 475 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE) REMARK 475 M RES C SSEQI REMARK 475 ASN A 119 REMARK 475 ASN B 119 REMARK 475 ASN C 119
REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 LYS H 214 CB CG CD CE NZ REMARK 480 LYS H 215 CB CG CD CE NZ REMARK 480 LYS H 219 CB CG CD CE NZ REMARK 480 LYS K 214 CB CG CD CE NZ REMARK 480 LYS K 215 CB CG CD CE NZ REMARK 480 LYS K 219 CB CG CD CE NZ REMARK 480 LYS X 214 CB CG CD CE NZ REMARK 480 LYS X 215 CB CG CD CE NZ REMARK 480 LYS X 219 CB CG CD CE NZ
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU M 17 NZ LYS M 111 2.05 REMARK 500 OE2 GLU L 17 NZ LYS L 111 2.16 REMARK 500 OE2 GLU Y 17 NZ LYS Y 111 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NH1 ARG M 24 NH2 ARG M 24 2655 2.03 REMARK 500 NH2 ARG L 24 NH2 ARG Y 24 4555 2.06 REMARK 500 NH2 ARG L 24 NH1 ARG Y 24 4555 2.11 REMARK 500 NH1 ARG L 24 NH2 ARG Y 24 4555 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 206 CA - CB - CG ANGL. DEV. = 18.2 DEGREES REMARK 500 LEU C 206 CA - CB - CG ANGL. DEV. = 14.4 DEGREES REMARK 500 LEU H 129 N - CA - C ANGL. DEV. = -17.5 DEGREES REMARK 500 LEU H 143 CA - CB - CG ANGL. DEV. = 15.9 DEGREES REMARK 500 CYS H 201 CA - CB - SG ANGL. DEV. = 7.3 DEGREES REMARK 500 ARG L 24 NE - CZ - NH2 ANGL. DEV. = -5.6 DEGREES REMARK 500 LEU K 129 N - CA - C ANGL. DEV. = -17.3 DEGREES REMARK 500 LEU X 129 N - CA - C ANGL. DEV. = -18.6 DEGREES REMARK 500 LEU X 143 CA - CB - CG ANGL. DEV. = 14.4 DEGREES REMARK 500 ARG Y 24 NE - CZ - NH2 ANGL. DEV. = -4.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 133 173.76 -46.80 REMARK 500 LYS A 143 -165.32 -127.23 REMARK 500 MET A 148 83.10 -160.91 REMARK 500 ASN A 150 -177.11 174.63 REMARK 500 ARG A 181 -74.02 -62.66 REMARK 500 ALA A 183 -89.01 -28.15 REMARK 500 SER A 185 -88.95 41.24 REMARK 500 GLN A 186 -130.88 37.27 REMARK 500 PRO A 188 -179.54 -64.94 REMARK 500 GLU A 202 -171.71 -53.75 REMARK 500 ARG A 203 150.38 176.51 REMARK 500 HIS A 212 130.62 -28.93 REMARK 500 ALA A 215 106.49 -18.28 REMARK 500 SER A 245 -2.28 -53.08 REMARK 500 GLN A 246 15.71 -142.11 REMARK 500 LYS B 133 174.41 -43.50 REMARK 500 GLU B 142 58.67 -90.79 REMARK 500 LYS B 143 -160.24 -122.30 REMARK 500 MET B 148 81.92 -166.64 REMARK 500 ASN B 150 -177.22 174.57 REMARK 500 ALA B 173 119.41 -160.15 REMARK 500 ARG B 181 -73.75 -66.41 REMARK 500 ALA B 183 -90.01 -28.75 REMARK 500 SER B 185 -88.84 40.50 REMARK 500 GLN B 186 -133.49 36.23 REMARK 500 PRO B 188 -176.31 -64.70 REMARK 500 GLU B 202 -170.23 -55.72 REMARK 500 ARG B 203 149.26 174.41 REMARK 500 HIS B 212 127.66 -27.88 REMARK 500 ALA B 215 108.03 -16.95 REMARK 500 SER B 245 -3.07 -50.36 REMARK 500 GLN B 246 20.89 -143.81 REMARK 500 LYS C 133 172.09 -44.45 REMARK 500 LYS C 143 -162.78 -127.74 REMARK 500 MET C 148 82.57 -165.95 REMARK 500 ASN C 150 -177.24 175.42 REMARK 500 ARG C 181 -76.11 -62.70 REMARK 500 ALA C 183 -90.32 -28.37 REMARK 500 SER C 185 -88.37 41.38 REMARK 500 GLN C 186 -132.57 36.28 REMARK 500 PRO C 188 -176.99 -62.40 REMARK 500 GLU C 202 -173.20 -57.29 REMARK 500 ARG C 203 150.08 175.85 REMARK 500 HIS C 212 129.98 -30.71 REMARK 500 ALA C 215 106.13 -18.78 REMARK 500 SER C 245 2.26 -53.53 REMARK 500 GLN C 246 23.68 -147.51 REMARK 500 PRO H 14 161.18 -48.65 REMARK 500 ALA H 16 -170.34 -65.22 REMARK 500 SER H 25 153.76 176.66 REMARK 500 PRO H 41 115.34 -32.43 REMARK 500 LYS H 63 -10.84 -48.64 REMARK 500 ASP H 73 75.49 -111.03 REMARK 500 LYS H 74 -52.02 -26.37 REMARK 500 ALA H 92 -167.62 168.05 REMARK 500 ASN H 103 -89.68 -135.17 REMARK 500 ALA H 119 167.10 -48.27 REMARK 500 THR H 121 142.91 -21.65 REMARK 500 LYS H 122 143.64 -175.85 REMARK 500 LEU H 129 76.97 -117.81 REMARK 500 ASP H 149 92.68 34.73 REMARK 500 PHE H 151 135.53 -171.61 REMARK 500 ASN H 160 60.48 36.90 REMARK 500 SER H 161 65.50 24.74 REMARK 500 LEU H 175 97.39 -62.04 REMARK 500 SER H 177 -167.06 -54.10 REMARK 500 SER H 178 -165.23 60.75 REMARK 500 SER H 192 -14.43 -48.01 REMARK 500 LEU H 194 -27.61 -28.98 REMARK 500 HIS H 205 72.85 -108.83 REMARK 500 PRO H 207 1.40 -49.72 REMARK 500 ASN H 209 -7.03 68.96 REMARK 500 PRO H 218 77.88 -68.39 REMARK 500 SER L 7 140.95 177.83 REMARK 500 VAL L 29 20.88 -141.94 REMARK 500 SER L 31 -146.63 -106.55 REMARK 500 THR L 33 -30.50 -136.11 REMARK 500 ALA L 55 -34.03 62.19 REMARK 500 SER L 71 157.97 175.85 REMARK 500 SER L 81 109.25 -164.60 REMARK 500 ALA L 88 -159.64 -170.13 REMARK 500 SER L 95 37.83 -167.79 REMARK 500 ARG L 112 140.60 -176.13 REMARK 500 ALA L 115 118.20 -161.64 REMARK 500 PRO L 124 117.55 -32.11 REMARK 500 ASN L 142 76.14 30.23 REMARK 500 TYR L 144 143.32 179.91 REMARK 500 ASN L 156 -11.18 71.79 REMARK 500 LEU L 158 102.43 -56.97 REMARK 500 GLN L 159 163.56 -48.59 REMARK 500 SER L 160 -12.16 -178.94 REMARK 500 LYS L 173 -63.90 -101.15 REMARK 500 SER L 178 119.05 -160.28 REMARK 500 LYS L 187 -37.89 -34.10 REMARK 500 ALA L 188 -75.82 -62.03 REMARK 500 LYS L 194 -64.69 -94.04 REMARK 500 HIS L 202 135.86 -173.90 REMARK 500 PRO L 208 109.87 -45.87 REMARK 500 ALA K 16 -167.16 -65.46 REMARK 500 PRO K 41 115.02 -35.77 REMARK 500 LYS K 63 -7.89 -51.64 REMARK 500 ASP K 73 72.55 -113.15 REMARK 500 LYS K 74 -49.93 -23.88 REMARK 500 ALA K 92 -167.55 169.23 REMARK 500 ASN K 103 -89.04 -135.49 REMARK 500 THR K 121 141.63 -22.75 REMARK 500 LYS K 122 142.55 -171.36 REMARK 500 LEU K 129 77.19 -117.35 REMARK 500 ASP K 149 92.18 33.82 REMARK 500 PHE K 151 137.82 -172.72 REMARK 500 ASN K 160 62.63 34.05 REMARK 500 SER K 161 63.54 23.20 REMARK 500 LEU K 175 98.01 -60.66 REMARK 500 SER K 177 -168.81 -55.95 REMARK 500 SER K 178 -165.38 62.26 REMARK 500 SER K 192 -14.87 -48.14 REMARK 500 LEU K 194 -23.71 -30.30 REMARK 500 HIS K 205 74.88 -109.78 REMARK 500 PRO K 207 2.76 -50.41 REMARK 500 ASN K 209 -7.02 69.32 REMARK 500 PRO K 218 80.33 -69.38 REMARK 500 SER M 7 139.49 175.90 REMARK 500 VAL M 29 25.01 -144.92 REMARK 500 SER M 31 -145.87 -107.73 REMARK 500 THR M 33 -30.41 -133.47 REMARK 500 ALA M 55 -29.07 58.30 REMARK 500 SER M 71 155.78 177.25 REMARK 500 SER M 81 102.35 -167.35 REMARK 500 ALA M 88 -162.13 -173.79 REMARK 500 SER M 95 38.01 -166.95 REMARK 500 ARG M 112 142.26 -172.72 REMARK 500 VAL M 114 163.25 -47.12 REMARK 500 PRO M 124 118.04 -34.55 REMARK 500 ASN M 142 72.40 28.67 REMARK 500 TYR M 144 144.61 -179.73 REMARK 500 PRO M 145 176.92 -56.69 REMARK 500 ASN M 156 -11.44 72.31 REMARK 500 LEU M 158 102.16 -56.76 REMARK 500 GLN M 159 163.69 -48.66 REMARK 500 SER M 160 -13.25 -178.49 REMARK 500 LYS M 173 -62.17 -99.32 REMARK 500 LYS M 187 -38.01 -34.06 REMARK 500 ALA M 188 -75.12 -60.85 REMARK 500 LYS M 194 -62.41 -96.06 REMARK 500 HIS M 202 130.30 -174.97 REMARK 500 GLN M 203 -50.93 -25.44 REMARK 500 PRO M 208 109.25 -46.58 REMARK 500 PRO X 14 157.40 -45.20 REMARK 500 ALA X 16 -168.01 -68.69 REMARK 500 PRO X 41 115.63 -35.32 REMARK 500 LYS X 63 -9.01 -49.03 REMARK 500 ASP X 73 77.06 -114.09 REMARK 500 LYS X 74 -52.63 -29.18 REMARK 500 GLU X 89 3.29 -69.25 REMARK 500 ALA X 92 -168.82 167.83 REMARK 500 ASN X 103 -88.90 -134.78 REMARK 500 ALA X 119 168.44 -49.33 REMARK 500 THR X 121 143.18 -23.34 REMARK 500 LYS X 122 139.11 -175.46 REMARK 500 LEU X 129 77.65 -116.16 REMARK 500 ASP X 149 90.88 36.48 REMARK 500 PHE X 151 136.73 -173.93 REMARK 500 ASN X 160 58.79 36.68 REMARK 500 SER X 161 61.92 26.60 REMARK 500 LEU X 175 99.94 -60.04 REMARK 500 SER X 177 -170.44 -53.61 REMARK 500 SER X 178 -165.35 64.26 REMARK 500 SER X 192 -13.61 -48.54 REMARK 500 LEU X 194 -27.14 -28.98 REMARK 500 HIS X 205 71.57 -111.88 REMARK 500 PRO X 207 4.11 -50.17 REMARK 500 SER X 208 11.44 -152.84 REMARK 500 ASN X 209 -7.18 67.52 REMARK 500 PRO X 218 77.50 -69.40 REMARK 500 SER Y 7 140.36 172.97 REMARK 500 VAL Y 29 19.84 -141.41 REMARK 500 SER Y 31 -143.62 -104.89 REMARK 500 THR Y 33 -31.53 -132.61 REMARK 500 ALA Y 55 -29.23 59.84 REMARK 500 SER Y 71 158.09 179.13 REMARK 500 SER Y 81 107.29 -167.47 REMARK 500 ALA Y 88 -163.27 -172.70 REMARK 500 SER Y 95 34.35 -168.76 REMARK 500 ARG Y 112 143.27 -177.31 REMARK 500 VAL Y 114 162.02 -48.00 REMARK 500 PRO Y 124 120.33 -31.27 REMARK 500 ASN Y 142 74.02 29.13 REMARK 500 TYR Y 144 145.41 -179.44 REMARK 500 PRO Y 145 -178.97 -56.42 REMARK 500 ASN Y 156 -11.12 73.16 REMARK 500 LEU Y 158 101.74 -58.08 REMARK 500 GLN Y 159 162.45 -48.16 REMARK 500 SER Y 160 -9.86 -179.77 REMARK 500 GLN Y 170 136.96 -39.47 REMARK 500 LYS Y 187 -38.70 -34.44 REMARK 500 ALA Y 188 -74.30 -60.50 REMARK 500 LYS Y 194 -62.00 -96.88 REMARK 500 HIS Y 202 132.70 -172.62 REMARK 500 GLN Y 203 -48.03 -28.61 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR C 145 0.07 SIDE_CHAIN REMARK 500 TYR H 35 0.07 SIDE_CHAIN REMARK 500 TYR K 32 0.09 SIDE_CHAIN REMARK 500 TYR K 35 0.07 SIDE_CHAIN REMARK 500 TYR M 177 0.07 SIDE_CHAIN REMARK 500 REMARK 500 REMARK: NULL
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN H 498 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN K 499 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN X 500
DBREF 1I9R A 116 261 UNP P29965 TNFL5_HUMAN 116 261 DBREF 1I9R B 116 261 UNP P29965 TNFL5_HUMAN 116 261 DBREF 1I9R C 116 261 UNP P29965 TNFL5_HUMAN 116 261 DBREF 1I9R H 1 219 PDB 1I9R 1I9R 1 219 DBREF 1I9R L 1 218 PDB 1I9R 1I9R 1 218 DBREF 1I9R K 1 219 PDB 1I9R 1I9R 1 219 DBREF 1I9R M 1 218 PDB 1I9R 1I9R 1 218 DBREF 1I9R X 1 219 PDB 1I9R 1I9R 1 219 DBREF 1I9R Y 1 218 PDB 1I9R 1I9R 1 218
SEQRES 1 A 146 GLY ASP GLN ASN PRO GLN ILE ALA ALA HIS VAL ILE SER SEQRES 2 A 146 GLU ALA SER SER LYS THR THR SER VAL LEU GLN TRP ALA SEQRES 3 A 146 GLU LYS GLY TYR TYR THR MET SER ASN ASN LEU VAL THR SEQRES 4 A 146 LEU GLU ASN GLY LYS GLN LEU THR VAL LYS ARG GLN GLY SEQRES 5 A 146 LEU TYR TYR ILE TYR ALA GLN VAL THR PHE CYS SER ASN SEQRES 6 A 146 ARG GLU ALA SER SER GLN ALA PRO PHE ILE ALA SER LEU SEQRES 7 A 146 CYS LEU LYS SER PRO GLY ARG PHE GLU ARG ILE LEU LEU SEQRES 8 A 146 ARG ALA ALA ASN THR HIS SER SER ALA LYS PRO CYS GLY SEQRES 9 A 146 GLN GLN SER ILE HIS LEU GLY GLY VAL PHE GLU LEU GLN SEQRES 10 A 146 PRO GLY ALA SER VAL PHE VAL ASN VAL THR ASP PRO SER SEQRES 11 A 146 GLN VAL SER HIS GLY THR GLY PHE THR SER PHE GLY LEU SEQRES 12 A 146 LEU LYS LEU SEQRES 1 B 146 GLY ASP GLN ASN PRO GLN ILE ALA ALA HIS VAL ILE SER SEQRES 2 B 146 GLU ALA SER SER LYS THR THR SER VAL LEU GLN TRP ALA SEQRES 3 B 146 GLU LYS GLY TYR TYR THR MET SER ASN ASN LEU VAL THR SEQRES 4 B 146 LEU GLU ASN GLY LYS GLN LEU THR VAL LYS ARG GLN GLY SEQRES 5 B 146 LEU TYR TYR ILE TYR ALA GLN VAL THR PHE CYS SER ASN SEQRES 6 B 146 ARG GLU ALA SER SER GLN ALA PRO PHE ILE ALA SER LEU SEQRES 7 B 146 CYS LEU LYS SER PRO GLY ARG PHE GLU ARG ILE LEU LEU SEQRES 8 B 146 ARG ALA ALA ASN THR HIS SER SER ALA LYS PRO CYS GLY SEQRES 9 B 146 GLN GLN SER ILE HIS LEU GLY GLY VAL PHE GLU LEU GLN SEQRES 10 B 146 PRO GLY ALA SER VAL PHE VAL ASN VAL THR ASP PRO SER SEQRES 11 B 146 GLN VAL SER HIS GLY THR GLY PHE THR SER PHE GLY LEU SEQRES 12 B 146 LEU LYS LEU SEQRES 1 C 146 GLY ASP GLN ASN PRO GLN ILE ALA ALA HIS VAL ILE SER SEQRES 2 C 146 GLU ALA SER SER LYS THR THR SER VAL LEU GLN TRP ALA SEQRES 3 C 146 GLU LYS GLY TYR TYR THR MET SER ASN ASN LEU VAL THR SEQRES 4 C 146 LEU GLU ASN GLY LYS GLN LEU THR VAL LYS ARG GLN GLY SEQRES 5 C 146 LEU TYR TYR ILE TYR ALA GLN VAL THR PHE CYS SER ASN SEQRES 6 C 146 ARG GLU ALA SER SER GLN ALA PRO PHE ILE ALA SER LEU SEQRES 7 C 146 CYS LEU LYS SER PRO GLY ARG PHE GLU ARG ILE LEU LEU SEQRES 8 C 146 ARG ALA ALA ASN THR HIS SER SER ALA LYS PRO CYS GLY SEQRES 9 C 146 GLN GLN SER ILE HIS LEU GLY GLY VAL PHE GLU LEU GLN SEQRES 10 C 146 PRO GLY ALA SER VAL PHE VAL ASN VAL THR ASP PRO SER SEQRES 11 C 146 GLN VAL SER HIS GLY THR GLY PHE THR SER PHE GLY LEU SEQRES 12 C 146 LEU LYS LEU SEQRES 1 H 219 GLN VAL GLN LEU VAL GLN SER GLY ALA GLU VAL VAL LYS SEQRES 2 H 219 PRO GLY ALA SER VAL LYS LEU SER CYS LYS ALA SER GLY SEQRES 3 H 219 TYR ILE PHE THR SER TYR TYR MET TYR TRP VAL LYS GLN SEQRES 4 H 219 ALA PRO GLY GLN GLY LEU GLU TRP ILE GLY GLU ILE ASN SEQRES 5 H 219 PRO SER ASN GLY ASP THR ASN PHE ASN GLU LYS PHE LYS SEQRES 6 H 219 SER LYS ALA THR LEU THR VAL ASP LYS SER ALA SER THR SEQRES 7 H 219 ALA TYR MET GLU LEU SER SER LEU ARG SER GLU ASP THR SEQRES 8 H 219 ALA VAL TYR TYR CYS THR ARG SER ASP GLY ARG ASN ASP SEQRES 9 H 219 MET ASP SER TRP GLY GLN GLY THR LEU VAL THR VAL SER SEQRES 10 H 219 SER ALA SER THR LYS GLY PRO SER VAL PHE PRO LEU ALA SEQRES 11 H 219 PRO SER SER LYS SER THR SER GLY GLY THR ALA ALA LEU SEQRES 12 H 219 GLY CYS LEU VAL LYS ASP TYR PHE PRO GLU PRO VAL THR SEQRES 13 H 219 VAL SER TRP ASN SER GLY ALA LEU THR SER GLY VAL HIS SEQRES 14 H 219 THR PHE PRO ALA VAL LEU GLN SER SER GLY LEU TYR SER SEQRES 15 H 219 LEU SER SER VAL VAL THR VAL PRO SER SER SER LEU GLY SEQRES 16 H 219 THR GLN THR TYR ILE CYS ASN VAL ASN HIS LYS PRO SER SEQRES 17 H 219 ASN THR LYS VAL ASP LYS LYS VAL GLU PRO LYS SEQRES 1 L 218 ASP ILE VAL LEU THR GLN SER PRO ALA THR LEU SER VAL SEQRES 2 L 218 SER PRO GLY GLU ARG ALA THR ILE SER CYS ARG ALA SER SEQRES 3 L 218 GLN ARG VAL SER SER SER THR TYR SER TYR MET HIS TRP SEQRES 4 L 218 TYR GLN GLN LYS PRO GLY GLN PRO PRO LYS LEU LEU ILE SEQRES 5 L 218 LYS TYR ALA SER ASN LEU GLU SER GLY VAL PRO ALA ARG SEQRES 6 L 218 PHE SER GLY SER GLY SER GLY THR ASP PHE THR LEU THR SEQRES 7 L 218 ILE SER SER VAL GLU PRO GLU ASP PHE ALA THR TYR TYR SEQRES 8 L 218 CYS GLN HIS SER TRP GLU ILE PRO PRO THR PHE GLY GLY SEQRES 9 L 218 GLY THR LYS LEU GLU ILE LYS ARG THR VAL ALA ALA PRO SEQRES 10 L 218 SER VAL PHE ILE PHE PRO PRO SER ASP GLU GLN LEU LYS SEQRES 11 L 218 SER GLY THR ALA SER VAL VAL CYS LEU LEU ASN ASN PHE SEQRES 12 L 218 TYR PRO ARG GLU ALA LYS VAL GLN TRP LYS VAL ASP ASN SEQRES 13 L 218 ALA LEU GLN SER GLY ASN SER GLN GLU SER VAL THR GLU SEQRES 14 L 218 GLN ASP SER LYS ASP SER THR TYR SER LEU SER SER THR SEQRES 15 L 218 LEU THR LEU SER LYS ALA ASP TYR GLU LYS HIS LYS VAL SEQRES 16 L 218 TYR ALA CYS GLU VAL THR HIS GLN GLY LEU SER SER PRO SEQRES 17 L 218 VAL THR LYS SER PHE ASN ARG GLY GLU CYS SEQRES 1 K 219 GLN VAL GLN LEU VAL GLN SER GLY ALA GLU VAL VAL LYS SEQRES 2 K 219 PRO GLY ALA SER VAL LYS LEU SER CYS LYS ALA SER GLY SEQRES 3 K 219 TYR ILE PHE THR SER TYR TYR MET TYR TRP VAL LYS GLN SEQRES 4 K 219 ALA PRO GLY GLN GLY LEU GLU TRP ILE GLY GLU ILE ASN SEQRES 5 K 219 PRO SER ASN GLY ASP THR ASN PHE ASN GLU LYS PHE LYS SEQRES 6 K 219 SER LYS ALA THR LEU THR VAL ASP LYS SER ALA SER THR SEQRES 7 K 219 ALA TYR MET GLU LEU SER SER LEU ARG SER GLU ASP THR SEQRES 8 K 219 ALA VAL TYR TYR CYS THR ARG SER ASP GLY ARG ASN ASP SEQRES 9 K 219 MET ASP SER TRP GLY GLN GLY THR LEU VAL THR VAL SER SEQRES 10 K 219 SER ALA SER THR LYS GLY PRO SER VAL PHE PRO LEU ALA SEQRES 11 K 219 PRO SER SER LYS SER THR SER GLY GLY THR ALA ALA LEU SEQRES 12 K 219 GLY CYS LEU VAL LYS ASP TYR PHE PRO GLU PRO VAL THR SEQRES 13 K 219 VAL SER TRP ASN SER GLY ALA LEU THR SER GLY VAL HIS SEQRES 14 K 219 THR PHE PRO ALA VAL LEU GLN SER SER GLY LEU TYR SER SEQRES 15 K 219 LEU SER SER VAL VAL THR VAL PRO SER SER SER LEU GLY SEQRES 16 K 219 THR GLN THR TYR ILE CYS ASN VAL ASN HIS LYS PRO SER SEQRES 17 K 219 ASN THR LYS VAL ASP LYS LYS VAL GLU PRO LYS SEQRES 1 M 218 ASP ILE VAL LEU THR GLN SER PRO ALA THR LEU SER VAL SEQRES 2 M 218 SER PRO GLY GLU ARG ALA THR ILE SER CYS ARG ALA SER SEQRES 3 M 218 GLN ARG VAL SER SER SER THR TYR SER TYR MET HIS TRP SEQRES 4 M 218 TYR GLN GLN LYS PRO GLY GLN PRO PRO LYS LEU LEU ILE SEQRES 5 M 218 LYS TYR ALA SER ASN LEU GLU SER GLY VAL PRO ALA ARG SEQRES 6 M 218 PHE SER GLY SER GLY SER GLY THR ASP PHE THR LEU THR SEQRES 7 M 218 ILE SER SER VAL GLU PRO GLU ASP PHE ALA THR TYR TYR SEQRES 8 M 218 CYS GLN HIS SER TRP GLU ILE PRO PRO THR PHE GLY GLY SEQRES 9 M 218 GLY THR LYS LEU GLU ILE LYS ARG THR VAL ALA ALA PRO SEQRES 10 M 218 SER VAL PHE ILE PHE PRO PRO SER ASP GLU GLN LEU LYS SEQRES 11 M 218 SER GLY THR ALA SER VAL VAL CYS LEU LEU ASN ASN PHE SEQRES 12 M 218 TYR PRO ARG GLU ALA LYS VAL GLN TRP LYS VAL ASP ASN SEQRES 13 M 218 ALA LEU GLN SER GLY ASN SER GLN GLU SER VAL THR GLU SEQRES 14 M 218 GLN ASP SER LYS ASP SER THR TYR SER LEU SER SER THR SEQRES 15 M 218 LEU THR LEU SER LYS ALA ASP TYR GLU LYS HIS LYS VAL SEQRES 16 M 218 TYR ALA CYS GLU VAL THR HIS GLN GLY LEU SER SER PRO SEQRES 17 M 218 VAL THR LYS SER PHE ASN ARG GLY GLU CYS SEQRES 1 X 219 GLN VAL GLN LEU VAL GLN SER GLY ALA GLU VAL VAL LYS SEQRES 2 X 219 PRO GLY ALA SER VAL LYS LEU SER CYS LYS ALA SER GLY SEQRES 3 X 219 TYR ILE PHE THR SER TYR TYR MET TYR TRP VAL LYS GLN SEQRES 4 X 219 ALA PRO GLY GLN GLY LEU GLU TRP ILE GLY GLU ILE ASN SEQRES 5 X 219 PRO SER ASN GLY ASP THR ASN PHE ASN GLU LYS PHE LYS SEQRES 6 X 219 SER LYS ALA THR LEU THR VAL ASP LYS SER ALA SER THR SEQRES 7 X 219 ALA TYR MET GLU LEU SER SER LEU ARG SER GLU ASP THR SEQRES 8 X 219 ALA VAL TYR TYR CYS THR ARG SER ASP GLY ARG ASN ASP SEQRES 9 X 219 MET ASP SER TRP GLY GLN GLY THR LEU VAL THR VAL SER SEQRES 10 X 219 SER ALA SER THR LYS GLY PRO SER VAL PHE PRO LEU ALA SEQRES 11 X 219 PRO SER SER LYS SER THR SER GLY GLY THR ALA ALA LEU SEQRES 12 X 219 GLY CYS LEU VAL LYS ASP TYR PHE PRO GLU PRO VAL THR SEQRES 13 X 219 VAL SER TRP ASN SER GLY ALA LEU THR SER GLY VAL HIS SEQRES 14 X 219 THR PHE PRO ALA VAL LEU GLN SER SER GLY LEU TYR SER SEQRES 15 X 219 LEU SER SER VAL VAL THR VAL PRO SER SER SER LEU GLY SEQRES 16 X 219 THR GLN THR TYR ILE CYS ASN VAL ASN HIS LYS PRO SER SEQRES 17 X 219 ASN THR LYS VAL ASP LYS LYS VAL GLU PRO LYS SEQRES 1 Y 218 ASP ILE VAL LEU THR GLN SER PRO ALA THR LEU SER VAL SEQRES 2 Y 218 SER PRO GLY GLU ARG ALA THR ILE SER CYS ARG ALA SER SEQRES 3 Y 218 GLN ARG VAL SER SER SER THR TYR SER TYR MET HIS TRP SEQRES 4 Y 218 TYR GLN GLN LYS PRO GLY GLN PRO PRO LYS LEU LEU ILE SEQRES 5 Y 218 LYS TYR ALA SER ASN LEU GLU SER GLY VAL PRO ALA ARG SEQRES 6 Y 218 PHE SER GLY SER GLY SER GLY THR ASP PHE THR LEU THR SEQRES 7 Y 218 ILE SER SER VAL GLU PRO GLU ASP PHE ALA THR TYR TYR SEQRES 8 Y 218 CYS GLN HIS SER TRP GLU ILE PRO PRO THR PHE GLY GLY SEQRES 9 Y 218 GLY THR LYS LEU GLU ILE LYS ARG THR VAL ALA ALA PRO SEQRES 10 Y 218 SER VAL PHE ILE PHE PRO PRO SER ASP GLU GLN LEU LYS SEQRES 11 Y 218 SER GLY THR ALA SER VAL VAL CYS LEU LEU ASN ASN PHE SEQRES 12 Y 218 TYR PRO ARG GLU ALA LYS VAL GLN TRP LYS VAL ASP ASN SEQRES 13 Y 218 ALA LEU GLN SER GLY ASN SER GLN GLU SER VAL THR GLU SEQRES 14 Y 218 GLN ASP SER LYS ASP SER THR TYR SER LEU SER SER THR SEQRES 15 Y 218 LEU THR LEU SER LYS ALA ASP TYR GLU LYS HIS LYS VAL SEQRES 16 Y 218 TYR ALA CYS GLU VAL THR HIS GLN GLY LEU SER SER PRO SEQRES 17 Y 218 VAL THR LYS SER PHE ASN ARG GLY GLU CYS
HET ZN H 498 1 HET ZN K 499 1 HET ZN X 500 1
HETNAM ZN ZINC ION
FORMUL 10 ZN 3(ZN 2+)
HELIX 1 1 ASP A 243 GLN A 246 5 4 HELIX 2 2 ASP B 243 GLN B 246 5 4 HELIX 3 3 ASP C 243 GLN C 246 5 4 HELIX 4 4 ILE H 28 TYR H 32 5 5 HELIX 5 5 GLU H 62 LYS H 65 5 4 HELIX 6 6 ARG H 87 THR H 91 5 5 HELIX 7 7 SER H 132 THR H 136 5 5 HELIX 8 8 SER H 161 ALA H 163 5 3 HELIX 9 9 SER H 192 LEU H 194 5 3 HELIX 10 10 LYS H 206 ASN H 209 5 4 HELIX 11 11 GLU L 83 PHE L 87 5 5 HELIX 12 12 SER L 125 LYS L 130 1 6 HELIX 13 13 LYS L 187 LYS L 192 1 6 HELIX 14 14 ILE K 28 TYR K 32 5 5 HELIX 15 15 GLU K 62 LYS K 65 5 4 HELIX 16 16 LYS K 74 ALA K 76 5 3 HELIX 17 17 ARG K 87 THR K 91 5 5 HELIX 18 18 SER K 132 THR K 136 5 5 HELIX 19 19 SER K 161 ALA K 163 5 3 HELIX 20 20 SER K 192 LEU K 194 5 3 HELIX 21 21 LYS K 206 ASN K 209 5 4 HELIX 22 22 GLU M 83 PHE M 87 5 5 HELIX 23 23 SER M 125 LYS M 130 1 6 HELIX 24 24 LYS M 187 LYS M 192 1 6 HELIX 25 25 ILE X 28 TYR X 32 5 5 HELIX 26 26 GLU X 62 LYS X 65 5 4 HELIX 27 27 ARG X 87 THR X 91 5 5 HELIX 28 28 SER X 132 THR X 136 5 5 HELIX 29 29 SER X 161 ALA X 163 5 3 HELIX 30 30 SER X 192 LEU X 194 5 3 HELIX 31 31 LYS X 206 ASN X 209 5 4 HELIX 32 32 GLU Y 83 PHE Y 87 5 5 HELIX 33 33 SER Y 125 LYS Y 130 1 6 HELIX 34 34 LYS Y 187 LYS Y 192 1 6
SHEET 1 A 9 THR A 147 MET A 148 0 SHEET 2 A 9 ALA A 123 GLU A 129 -1 O HIS A 125 N THR A 147 SHEET 3 A 9 GLN A 139 ALA A 141 -1 O GLN A 139 N GLU A 129 SHEET 4 A 9 ALA A 123 GLU A 129 -1 O ILE A 127 N ALA A 141 SHEET 5 A 9 SER A 255 LYS A 260 -1 O PHE A 256 N VAL A 126 SHEET 6 A 9 GLY A 167 SER A 179 -1 N TYR A 170 O LEU A 259 SHEET 7 A 9 GLY A 219 LEU A 225 -1 N GLY A 219 O SER A 179 SHEET 8 A 9 GLY A 167 SER A 179 -1 O ALA A 173 N LEU A 225 SHEET 9 A 9 VAL A 228 LEU A 231 -1 O PHE A 229 N TYR A 169 SHEET 1 B 5 VAL A 153 GLU A 156 0 SHEET 2 B 5 GLN A 160 VAL A 163 -1 N GLN A 160 O GLU A 156 SHEET 3 B 5 SER A 236 VAL A 241 -1 N VAL A 237 O LEU A 161 SHEET 4 B 5 PHE A 189 LYS A 196 -1 O SER A 192 N ASN A 240 SHEET 5 B 5 ARG A 203 ASN A 210 -1 O ARG A 203 N LEU A 195 SHEET 1 C11 GLN B 139 ALA B 141 0 SHEET 2 C11 ALA B 123 GLU B 129 -1 O ILE B 127 N ALA B 141 SHEET 3 C11 THR B 147 MET B 148 -1 N THR B 147 O HIS B 125 SHEET 4 C11 ALA B 123 GLU B 129 -1 O HIS B 125 N THR B 147 SHEET 5 C11 SER B 255 LYS B 260 -1 O PHE B 256 N VAL B 126 SHEET 6 C11 GLY B 167 SER B 179 -1 N TYR B 170 O LEU B 259 SHEET 7 C11 GLY B 219 LEU B 225 -1 N GLY B 219 O SER B 179 SHEET 8 C11 GLY B 167 SER B 179 -1 O ALA B 173 N LEU B 225 SHEET 9 C11 GLY B 219 LEU B 225 -1 N GLY B 219 O SER B 179 SHEET 10 C11 GLY B 167 SER B 179 -1 O ALA B 173 N LEU B 225 SHEET 11 C11 VAL B 228 LEU B 231 -1 O PHE B 229 N TYR B 169 SHEET 1 D 5 VAL B 153 GLU B 156 0 SHEET 2 D 5 GLN B 160 VAL B 163 -1 N GLN B 160 O GLU B 156 SHEET 3 D 5 SER B 236 VAL B 241 -1 N VAL B 237 O LEU B 161 SHEET 4 D 5 PHE B 189 LYS B 196 -1 N SER B 192 O ASN B 240 SHEET 5 D 5 ILE B 204 ASN B 210 -1 N LEU B 205 O LEU B 193 SHEET 1 E 9 THR C 147 MET C 148 0 SHEET 2 E 9 ALA C 123 GLU C 129 -1 O HIS C 125 N THR C 147 SHEET 3 E 9 GLN C 139 ALA C 141 -1 O GLN C 139 N GLU C 129 SHEET 4 E 9 ALA C 123 GLU C 129 -1 O ILE C 127 N ALA C 141 SHEET 5 E 9 SER C 255 LYS C 260 -1 O PHE C 256 N VAL C 126 SHEET 6 E 9 GLY C 167 SER C 179 -1 N TYR C 170 O LEU C 259 SHEET 7 E 9 VAL C 228 LEU C 231 -1 O PHE C 229 N TYR C 169 SHEET 8 E 9 GLY C 167 SER C 179 -1 O GLY C 167 N LEU C 231 SHEET 9 E 9 GLY C 219 LEU C 225 -1 N GLY C 219 O SER C 179 SHEET 1 F 5 VAL C 153 GLU C 156 0 SHEET 2 F 5 GLN C 160 VAL C 163 -1 N GLN C 160 O GLU C 156 SHEET 3 F 5 SER C 236 VAL C 241 -1 O VAL C 237 N LEU C 161 SHEET 4 F 5 PHE C 189 LEU C 195 -1 N SER C 192 O ASN C 240 SHEET 5 F 5 ARG C 203 ASN C 210 -1 O ARG C 203 N LEU C 195 SHEET 1 G 4 GLN H 3 GLN H 6 0 SHEET 2 G 4 VAL H 18 SER H 25 -1 O LYS H 23 N VAL H 5 SHEET 3 G 4 THR H 78 LEU H 83 -1 N ALA H 79 O CYS H 22 SHEET 4 G 4 LEU H 70 ASP H 73 -1 O THR H 71 N TYR H 80 SHEET 1 H 8 GLU H 10 VAL H 12 0 SHEET 2 H 8 THR H 112 VAL H 116 1 O LEU H 113 N GLU H 10 SHEET 3 H 8 ALA H 92 ASP H 100 -1 O ALA H 92 N VAL H 114 SHEET 4 H 8 ASP H 104 TRP H 108 -1 O ASP H 104 N ASP H 100 SHEET 5 H 8 ALA H 92 ASP H 100 -1 N ARG H 98 O SER H 107 SHEET 6 H 8 MET H 34 GLN H 39 -1 N TYR H 35 O THR H 97 SHEET 7 H 8 LEU H 45 ILE H 51 -1 N GLU H 46 O LYS H 38 SHEET 8 H 8 THR H 58 PHE H 60 -1 N ASN H 59 O GLU H 50 SHEET 1 I 4 SER H 125 LEU H 129 0 SHEET 2 I 4 THR H 140 TYR H 150 -1 O GLY H 144 N LEU H 129 SHEET 3 I 4 TYR H 181 PRO H 190 -1 N TYR H 181 O TYR H 150 SHEET 4 I 4 VAL H 168 THR H 170 -1 N HIS H 169 O VAL H 186 SHEET 1 J 3 THR H 156 TRP H 159 0 SHEET 2 J 3 TYR H 199 HIS H 205 -1 N ASN H 202 O SER H 158 SHEET 3 J 3 THR H 210 VAL H 216 -1 O THR H 210 N HIS H 205 SHEET 1 K 6 THR L 10 VAL L 13 0 SHEET 2 K 6 THR L 106 ILE L 110 1 O LYS L 107 N LEU L 11 SHEET 3 K 6 THR L 89 HIS L 94 -1 N TYR L 90 O THR L 106 SHEET 4 K 6 MET L 37 GLN L 42 -1 O HIS L 38 N GLN L 93 SHEET 5 K 6 LYS L 49 LYS L 53 -1 N LYS L 49 O GLN L 41 SHEET 6 K 6 ASN L 57 LEU L 58 -1 O ASN L 57 N LYS L 53 SHEET 1 L 3 ALA L 19 ARG L 24 0 SHEET 2 L 3 ASP L 74 ILE L 79 -1 O PHE L 75 N CYS L 23 SHEET 3 L 3 PHE L 66 SER L 71 -1 O SER L 67 N THR L 78 SHEET 1 M 4 THR L 133 PHE L 143 0 SHEET 2 M 4 SER L 118 PHE L 122 -1 O SER L 118 N ASN L 141 SHEET 3 M 4 TYR L 177 SER L 186 0 SHEET 4 M 4 SER L 163 GLN L 164 -1 O GLN L 164 N THR L 182 SHEET 1 N 4 ALA L 157 LEU L 158 0 SHEET 2 N 4 LYS L 149 VAL L 154 -1 O VAL L 154 N ALA L 157 SHEET 3 N 4 VAL L 195 THR L 201 -1 O ALA L 197 N LYS L 153 SHEET 4 N 4 VAL L 209 ASN L 214 -1 O VAL L 209 N VAL L 200 SHEET 1 O 4 GLN K 3 GLN K 6 0 SHEET 2 O 4 SER K 17 SER K 25 -1 O LYS K 23 N VAL K 5 SHEET 3 O 4 THR K 78 SER K 84 -1 N ALA K 79 O CYS K 22 SHEET 4 O 4 THR K 71 VAL K 72 -1 O THR K 71 N TYR K 80 SHEET 1 P 8 GLU K 10 VAL K 12 0 SHEET 2 P 8 THR K 112 VAL K 116 1 O LEU K 113 N GLU K 10 SHEET 3 P 8 ALA K 92 ASP K 100 -1 O ALA K 92 N VAL K 114 SHEET 4 P 8 ASP K 104 TRP K 108 -1 O ASP K 104 N ASP K 100 SHEET 5 P 8 ALA K 92 ASP K 100 -1 N ARG K 98 O SER K 107 SHEET 6 P 8 MET K 34 GLN K 39 -1 N TYR K 35 O THR K 97 SHEET 7 P 8 LEU K 45 ILE K 51 -1 N GLU K 46 O LYS K 38 SHEET 8 P 8 THR K 58 PHE K 60 -1 O ASN K 59 N GLU K 50 SHEET 1 Q 4 SER K 125 LEU K 129 0 SHEET 2 Q 4 THR K 140 TYR K 150 -1 O GLY K 144 N LEU K 129 SHEET 3 Q 4 TYR K 181 PRO K 190 -1 N TYR K 181 O TYR K 150 SHEET 4 Q 4 VAL K 168 THR K 170 -1 N HIS K 169 O VAL K 186 SHEET 1 R 3 THR K 156 TRP K 159 0 SHEET 2 R 3 TYR K 199 HIS K 205 -1 N ASN K 202 O SER K 158 SHEET 3 R 3 THR K 210 VAL K 216 -1 N THR K 210 O HIS K 205 SHEET 1 S 6 THR M 10 VAL M 13 0 SHEET 2 S 6 THR M 106 ILE M 110 1 O LYS M 107 N LEU M 11 SHEET 3 S 6 THR M 89 HIS M 94 -1 N TYR M 90 O THR M 106 SHEET 4 S 6 MET M 37 GLN M 42 -1 O HIS M 38 N GLN M 93 SHEET 5 S 6 LYS M 49 LYS M 53 -1 N LYS M 49 O GLN M 41 SHEET 6 S 6 ASN M 57 LEU M 58 -1 O ASN M 57 N LYS M 53 SHEET 1 T 3 ALA M 19 ARG M 24 0 SHEET 2 T 3 ASP M 74 ILE M 79 -1 O PHE M 75 N CYS M 23 SHEET 3 T 3 GLY M 68 SER M 71 -1 O SER M 69 N THR M 76 SHEET 1 U 4 SER M 118 PHE M 122 0 SHEET 2 U 4 THR M 133 PHE M 143 -1 O VAL M 137 N PHE M 122 SHEET 3 U 4 TYR M 177 SER M 186 -1 N TYR M 177 O PHE M 143 SHEET 4 U 4 SER M 163 GLN M 164 -1 O GLN M 164 N THR M 182 SHEET 1 V 4 ALA M 157 LEU M 158 0 SHEET 2 V 4 LYS M 149 VAL M 154 -1 N VAL M 154 O ALA M 157 SHEET 3 V 4 VAL M 195 THR M 201 -1 O ALA M 197 N LYS M 153 SHEET 4 V 4 VAL M 209 ASN M 214 -1 O VAL M 209 N VAL M 200 SHEET 1 W 4 GLN X 3 GLN X 6 0 SHEET 2 W 4 VAL X 18 SER X 25 -1 O LYS X 23 N VAL X 5 SHEET 3 W 4 THR X 78 LEU X 83 -1 N ALA X 79 O CYS X 22 SHEET 4 W 4 THR X 71 ASP X 73 -1 O THR X 71 N TYR X 80 SHEET 1 X 8 GLU X 10 VAL X 12 0 SHEET 2 X 8 THR X 112 VAL X 116 1 O LEU X 113 N GLU X 10 SHEET 3 X 8 ALA X 92 ASP X 100 -1 O ALA X 92 N VAL X 114 SHEET 4 X 8 ASP X 104 TRP X 108 -1 O ASP X 104 N ASP X 100 SHEET 5 X 8 ALA X 92 ASP X 100 -1 N ARG X 98 O SER X 107 SHEET 6 X 8 TYR X 33 GLN X 39 -1 O TYR X 33 N SER X 99 SHEET 7 X 8 LEU X 45 ILE X 51 -1 N GLU X 46 O LYS X 38 SHEET 8 X 8 THR X 58 PHE X 60 -1 O ASN X 59 N GLU X 50 SHEET 1 Y 4 SER X 125 LEU X 129 0 SHEET 2 Y 4 THR X 140 TYR X 150 -1 O GLY X 144 N LEU X 129 SHEET 3 Y 4 TYR X 181 PRO X 190 -1 N TYR X 181 O TYR X 150 SHEET 4 Y 4 VAL X 168 THR X 170 -1 N HIS X 169 O VAL X 186 SHEET 1 Z 3 THR X 156 TRP X 159 0 SHEET 2 Z 3 TYR X 199 HIS X 205 -1 N ASN X 202 O SER X 158 SHEET 3 Z 3 THR X 210 VAL X 216 -1 O THR X 210 N HIS X 205 SHEET 1 AA 9 THR Y 10 VAL Y 13 0 SHEET 2 AA 9 THR Y 106 ILE Y 110 -1 SHEET 3 AA 9 THR Y 89 HIS Y 94 -1 SHEET 4 AA 9 MET Y 37 GLN Y 42 -1 SHEET 5 AA 9 LYS Y 49 LYS Y 53 -1 SHEET 6 AA 9 ASN Y 57 LEU Y 58 -1 SHEET 1 AB 5 ALA Y 19 ARG Y 24 0 SHEET 2 AB 5 ASP Y 74 ILE Y 79 -1 SHEET 3 AB 5 GLY Y 68 SER Y 71 -1 SHEET 1 AC11 SER Y 118 PHE Y 122 0 SHEET 2 AC11 THR Y 133 PHE Y 143 -1 SHEET 3 AC11 TYR Y 177 SER Y 186 -1 SHEET 4 AC11 SER Y 163 GLN Y 164 -1
SSBOND 1 CYS A 178 CYS A 218 1555 1555 2.04 SSBOND 2 CYS B 178 CYS B 218 1555 1555 2.05 SSBOND 3 CYS C 178 CYS C 218 1555 1555 2.05 SSBOND 4 CYS H 22 CYS H 96 1555 1555 2.03 SSBOND 5 CYS H 145 CYS H 201 1555 1555 2.03 SSBOND 6 CYS L 23 CYS L 92 1555 1555 2.04 SSBOND 7 CYS L 138 CYS L 198 1555 1555 2.05 SSBOND 8 CYS K 22 CYS K 96 1555 1555 2.03 SSBOND 9 CYS K 145 CYS K 201 1555 1555 2.03 SSBOND 10 CYS M 23 CYS M 92 1555 1555 2.05 SSBOND 11 CYS M 138 CYS M 198 1555 1555 2.05 SSBOND 12 CYS X 22 CYS X 96 1555 1555 2.04 SSBOND 13 CYS X 145 CYS X 201 1555 1555 2.03 SSBOND 14 CYS Y 23 CYS Y 92 1555 1555 2.05 SSBOND 15 CYS Y 138 CYS Y 198 1555 1555 2.04
LINK ZN ZN H 498 OD2 ASP H 106 1555 1555 2.45 LINK ZN ZN K 499 OD2 ASP K 106 1555 1555 2.41 LINK ZN ZN X 500 OD2 ASP X 106 1555 1555 2.52
CISPEP 1 LYS A 216 PRO A 217 0 0.05 CISPEP 2 LYS B 216 PRO B 217 0 0.13 CISPEP 3 LYS C 216 PRO C 217 0 0.00 CISPEP 4 PHE H 151 PRO H 152 0 0.06 CISPEP 5 GLU H 153 PRO H 154 0 -0.42 CISPEP 6 SER L 7 PRO L 8 0 0.17 CISPEP 7 ILE L 98 PRO L 99 0 0.54 CISPEP 8 TYR L 144 PRO L 145 0 2.25 CISPEP 9 PHE K 151 PRO K 152 0 -0.99 CISPEP 10 GLU K 153 PRO K 154 0 0.17 CISPEP 11 SER M 7 PRO M 8 0 -0.19 CISPEP 12 ILE M 98 PRO M 99 0 -0.47 CISPEP 13 TYR M 144 PRO M 145 0 -7.81 CISPEP 14 PHE X 151 PRO X 152 0 0.16 CISPEP 15 GLU X 153 PRO X 154 0 -1.56 CISPEP 16 SER Y 7 PRO Y 8 0 -0.10 CISPEP 17 ILE Y 98 PRO Y 99 0 0.18 CISPEP 18 TYR Y 144 PRO Y 145 0 -5.82
SITE 1 AC1 5 ASP H 100 ASP H 104 ASP H 106 LYS L 53 SITE 2 AC1 5 GLU L 59 SITE 1 AC2 5 ASP K 100 ASP K 104 ASP K 106 LYS M 53 SITE 2 AC2 5 GLU M 59 SITE 1 AC3 5 ASP X 100 ASP X 104 ASP X 106 LYS Y 53 SITE 2 AC3 5 GLU Y 59
CRYST1 224.480 129.910 96.490 90.00 109.60 90.00 C 1 2 1 12
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.004455 0.000000 0.001586 0.00000
SCALE2 0.000000 0.007698 0.000000 0.00000
SCALE3 0.000000 0.000000 0.011001 0.00000