10 20 30 40 50 60 70 80 1I05 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER TRANSPORT PROTEIN 28-JAN-01 1I05
TITLE CRYSTAL STRUCTURE OF MOUSE MAJOR URINARY PROTEIN (MUP-I) TITLE 2 COMPLEXED WITH HYDROXY-METHYL-HEPTANONE
COMPND MOL_ID: 1; COMPND 2 MOLECULE: MAJOR URINARY PROTEIN I; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ALPHA-2U-GLOBULIN I; COMPND 5 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: MUP-I; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562
KEYWDS LIPOCALIN, BETA-BARREL, PHEROMONE, TRANSPORT PROTEIN
EXPDTA X-RAY DIFFRACTION
AUTHOR D.E.TIMM,L.J.BAKER,H.MUELLER,L.ZIDEK,M.V.NOVOTNY
REVDAT 3 24-FEB-09 1I05 1 VERSN REVDAT 2 15-MAR-05 1I05 1 JRNL REVDAT 1 14-FEB-01 1I05 0
JRNL AUTH D.E.TIMM,L.J.BAKER,H.MUELLER,L.ZIDEK,M.V.NOVOTNY JRNL TITL STRUCTURAL BASIS OF PHEROMONE BINDING TO MOUSE JRNL TITL 2 MAJOR URINARY PROTEIN (MUP-I) JRNL REF PROTEIN SCI. V. 10 997 2001 JRNL REFN ISSN 0961-8368 JRNL PMID 11316880 JRNL DOI 10.1110/PS.52201
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 0.9 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 12397 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.194 REMARK 3 FREE R VALUE : 0.230 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 1691 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1228 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 17 REMARK 3 SOLVENT ATOMS : 92 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 21.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 1.67 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1I05 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 31-JAN-01. REMARK 100 THE RCSB ID CODE IS RCSB012740.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-FEB-99 REMARK 200 TEMPERATURE (KELVIN) : 298 REMARK 200 PH : 5.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU200 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : MIRRORS REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IIC REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12397 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : 0.08200 REMARK 200 R SYM (I) : 0.08200 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 12.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.6 REMARK 200 DATA REDUNDANCY IN SHELL : 3.30 REMARK 200 R MERGE FOR SHELL (I) : 0.32900 REMARK 200 R SYM FOR SHELL (I) : 0.32900 REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: 1MUP REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.19 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.13 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 200 MM MALEATE/HCL, 100 MM CADMIUM REMARK 280 CHLORIDE, PH 5.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 298K
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 54.29650 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 28.46350 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 28.46350 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 81.44475 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 28.46350 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 28.46350 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 27.14825 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 28.46350 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 28.46350 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 81.44475 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 28.46350 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 28.46350 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 27.14825 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 54.29650 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 LYS A 2 REMARK 465 MET A 3 REMARK 465 LEU A 4 REMARK 465 LEU A 5 REMARK 465 LEU A 6 REMARK 465 LEU A 7 REMARK 465 CYS A 8 REMARK 465 LEU A 9 REMARK 465 GLY A 10 REMARK 465 LEU A 11 REMARK 465 THR A 12 REMARK 465 LEU A 13 REMARK 465 VAL A 14 REMARK 465 CYS A 15 REMARK 465 VAL A 16 REMARK 465 HIS A 17 REMARK 465 ALA A 18 REMARK 465 GLU A 19 REMARK 465 LEU A 176 REMARK 465 GLN A 177 REMARK 465 ALA A 178 REMARK 465 ARG A 179 REMARK 465 GLU A 180
REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS(M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A 53 CG OD1 ND2 REMARK 470 GLU A 67 CG CD OE1 OE2 REMARK 470 ARG A 78 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 93 CG CD OE1 OE2 REMARK 470 LYS A 94 CG CD CE NZ REMARK 470 GLU A 164 CG CD OE1 OE2 REMARK 470 ASN A 171 CG OD1 ND2 REMARK 470 ARG A 174 CG CD NE CZ NH1 NH2
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE2 GLU A 126 CD CD A 403 3544 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 52 -44.58 -29.93 REMARK 500 GLU A 80 -6.52 72.07 REMARK 500 THR A 92 -162.60 -101.36 REMARK 500 TYR A 102 109.89 -161.96 REMARK 500 TYR A 115 -50.32 73.53 REMARK 500 ASN A 117 -51.81 -130.40 REMARK 500 REMARK 500 REMARK: NULL
REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A 401 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 551 O REMARK 620 2 HIS A 122 NE2 179.0 REMARK 620 3 GLN A 133 OE1 84.6 94.6 REMARK 620 4 HIS A 159 ND1 90.5 90.3 111.6 REMARK 620 5 GLU A 80 OE1 89.1 91.4 151.1 96.6 REMARK 620 6 GLU A 80 OE2 90.4 89.1 98.4 149.9 53.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A 402 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 509 O REMARK 620 2 GLU A 36 OE1 85.4 REMARK 620 3 GLU A 36 OE2 97.7 50.2 REMARK 620 4 HOH A 508 O 166.7 82.1 77.6 REMARK 620 5 GLU A 157 OE1 79.1 81.3 131.3 94.5 REMARK 620 6 HOH A 557 O 94.4 139.5 90.0 98.0 138.5 REMARK 620 7 GLU A 157 OE2 89.0 137.2 170.8 97.1 56.0 83.2 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A 403 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 502 O REMARK 620 2 ASP A 79 OD1 81.3 REMARK 620 3 ASP A 79 OD2 110.1 48.4 REMARK 620 4 HOH A 566 O 62.7 141.0 129.3 REMARK 620 5 GLU A 126 OE2 99.3 114.4 140.3 87.4 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A 404 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 61 OE2 REMARK 620 2 GLU A 84 OE1 97.3 REMARK 620 3 GLU A 61 OE1 54.1 97.0 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A 405 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 38 NE2 REMARK 620 2 HOH A 522 O 153.7 REMARK 620 3 GLU A 36 OE2 91.8 87.1 REMARK 620 4 HOH A 557 O 111.4 94.9 91.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A 406 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 567 O REMARK 620 2 HIS A 64 NE2 101.1 REMARK 620 3 HOH A 549 O 55.5 80.9 REMARK 620 4 HOH A 540 O 96.9 161.9 111.6 REMARK 620 5 SER A 146 OG 168.7 80.9 114.3 82.0 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A 407 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 596 O REMARK 620 2 ASP A 116 OD1 104.1 REMARK 620 3 ASP A 116 OD2 88.8 44.8 REMARK 620 N 1 2
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD A 401 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD A 402 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD A 403 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD A 404 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD A 405 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD A 406 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD A 407 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LTL A 408
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1MUP RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF MAJOR URINARY PROTEIN COMPLEX WITH 2- REMARK 900 (SEC-BUTYL) THIAZOLINE REMARK 900 RELATED ID: 1IO4 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF MOUSE MAJOR URINARY PROTEIN-I FROM REMARK 900 MOUSE LIVER REMARK 900 RELATED ID: 1IO6 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF MOUSE MAJOR URINARY PROTEIN (MUP-I) REMARK 900 COMPLEXED WITH SEC-BUTYL-THIAZOLINE
DBREF 1I05 A 1 180 UNP P02762 MUP6_MOUSE 1 180
SEQRES 1 A 180 MET LYS MET LEU LEU LEU LEU CYS LEU GLY LEU THR LEU SEQRES 2 A 180 VAL CYS VAL HIS ALA GLU GLU ALA SER SER THR GLY ARG SEQRES 3 A 180 ASN PHE ASN VAL GLU LYS ILE ASN GLY GLU TRP HIS THR SEQRES 4 A 180 ILE ILE LEU ALA SER ASP LYS ARG GLU LYS ILE GLU ASP SEQRES 5 A 180 ASN GLY ASN PHE ARG LEU PHE LEU GLU GLN ILE HIS VAL SEQRES 6 A 180 LEU GLU ASN SER LEU VAL LEU LYS PHE HIS THR VAL ARG SEQRES 7 A 180 ASP GLU GLU CYS SER GLU LEU SER MET VAL ALA ASP LYS SEQRES 8 A 180 THR GLU LYS ALA GLY GLU TYR SER VAL THR TYR ASP GLY SEQRES 9 A 180 PHE ASN THR PHE THR ILE PRO LYS THR ASP TYR ASP ASN SEQRES 10 A 180 PHE LEU MET ALA HIS LEU ILE ASN GLU LYS ASP GLY GLU SEQRES 11 A 180 THR PHE GLN LEU MET GLY LEU TYR GLY ARG GLU PRO ASP SEQRES 12 A 180 LEU SER SER ASP ILE LYS GLU ARG PHE ALA GLN LEU CYS SEQRES 13 A 180 GLU GLU HIS GLY ILE LEU ARG GLU ASN ILE ILE ASP LEU SEQRES 14 A 180 SER ASN ALA ASN ARG CYS LEU GLN ALA ARG GLU
HET CD A 401 1 HET CD A 402 1 HET CD A 403 1 HET CD A 404 1 HET CD A 405 1 HET CD A 406 1 HET CD A 407 1 HET LTL A 408 10
HETNAM CD CADMIUM ION HETNAM LTL 6-HYDROXY-6-METHYL-HEPTAN-3-ONE
FORMUL 2 CD 7(CD 2+) FORMUL 9 LTL C8 H16 O2 FORMUL 10 HOH *92(H2 O)
HELIX 1 1 ASN A 29 ASN A 34 5 6 HELIX 2 2 LYS A 46 GLU A 51 5 6 HELIX 3 3 SER A 145 HIS A 159 1 15 HELIX 4 4 LEU A 162 GLU A 164 5 3
SHEET 1 A10 GLY A 35 GLU A 36 0 SHEET 2 A10 PHE A 59 VAL A 65 -1 O ILE A 63 N GLY A 35 SHEET 3 A10 SER A 69 ARG A 78 -1 N VAL A 71 O HIS A 64 SHEET 4 A10 GLU A 81 LYS A 91 -1 N GLU A 81 O ARG A 78 SHEET 5 A10 TYR A 98 THR A 101 -1 N SER A 99 O ASP A 90 SHEET 6 A10 PHE A 105 THR A 113 -1 O ASN A 106 N VAL A 100 SHEET 7 A10 PHE A 118 LYS A 127 -1 N MET A 120 O LYS A 112 SHEET 8 A10 GLU A 130 GLY A 139 -1 O GLU A 130 N LYS A 127 SHEET 9 A10 HIS A 38 SER A 44 -1 O HIS A 38 N GLY A 139 SHEET 10 A10 ILE A 166 ASP A 168 -1 N ILE A 167 O LEU A 42
SSBOND 1 CYS A 82 CYS A 175 1555 1555 2.03
LINK CD CD A 401 O HOH A 551 1555 1555 2.54 LINK CD CD A 401 NE2 HIS A 122 1555 1555 2.37 LINK CD CD A 401 OE1 GLN A 133 1555 1555 2.22 LINK CD CD A 401 ND1 HIS A 159 1555 1555 2.36 LINK CD CD A 402 O HOH A 509 1555 1555 2.32 LINK CD CD A 402 OE1 GLU A 36 1555 1555 2.69 LINK CD CD A 402 OE2 GLU A 36 1555 1555 2.49 LINK CD CD A 402 O HOH A 508 1555 1555 2.11 LINK CD CD A 403 O HOH A 502 1555 1555 2.38 LINK CD CD A 403 OD1 ASP A 79 1555 1555 2.29 LINK CD CD A 403 OD2 ASP A 79 1555 1555 2.90 LINK CD CD A 404 OE2 GLU A 61 1555 1555 2.46 LINK CD CD A 404 OE1 GLU A 84 1555 1555 2.59 LINK CD CD A 404 OE1 GLU A 61 1555 1555 2.39 LINK CD CD A 405 NE2 HIS A 38 1555 1555 2.21 LINK CD CD A 405 O HOH A 522 1555 1555 3.05 LINK CD CD A 405 OE2 GLU A 36 1555 1555 2.31 LINK CD CD A 406 O HOH A 567 1555 1555 3.04 LINK CD CD A 406 NE2 HIS A 64 1555 1555 2.34 LINK CD CD A 406 O HOH A 549 1555 1555 2.47 LINK CD CD A 407 O HOH A 596 1555 1555 2.91 LINK CD CD A 407 OD1 ASP A 116 1555 1555 3.11 LINK CD CD A 407 OD2 ASP A 116 1555 1555 2.37 LINK CD CD A 401 OE1 GLU A 80 1555 3544 2.47 LINK CD CD A 401 OE2 GLU A 80 1555 3544 2.43 LINK CD CD A 402 OE1 GLU A 157 1555 5555 2.30 LINK CD CD A 402 O HOH A 557 1555 5555 2.71 LINK CD CD A 402 OE2 GLU A 157 1555 5555 2.38 LINK CD CD A 403 O HOH A 566 1555 4555 2.79 LINK CD CD A 403 OE2 GLU A 126 1555 4555 2.08 LINK CD CD A 405 O HOH A 557 1555 5555 2.78 LINK CD CD A 406 O HOH A 540 1555 5555 2.76 LINK CD CD A 406 OG SER A 146 1555 5555 2.56
SITE 1 AC1 5 GLU A 80 HIS A 122 GLN A 133 HIS A 159 SITE 2 AC1 5 HOH A 551 SITE 1 AC2 6 GLU A 36 GLU A 157 CD A 405 HOH A 508 SITE 2 AC2 6 HOH A 509 HOH A 557 SITE 1 AC3 4 ASP A 79 GLU A 126 HOH A 502 HOH A 566 SITE 1 AC4 2 GLU A 61 GLU A 84 SITE 1 AC5 5 GLU A 36 HIS A 38 CD A 402 HOH A 522 SITE 2 AC5 5 HOH A 557 SITE 1 AC6 5 HIS A 64 SER A 146 HOH A 540 HOH A 549 SITE 2 AC6 5 HOH A 567 SITE 1 AC7 2 ASP A 116 HOH A 596 SITE 1 AC8 5 TYR A 102 PHE A 108 ALA A 121 TYR A 138 SITE 2 AC8 5 HOH A 501
CRYST1 56.927 56.927 108.593 90.00 90.00 90.00 P 43 21 2 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.017566 0.000000 0.000000 0.00000
SCALE2 0.000000 0.017566 0.000000 0.00000
SCALE3 0.000000 0.000000 0.009209 0.00000