10 20 30 40 50 60 70 80 1HYW - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER VIRAL PROTEIN 22-JAN-01 1HYW
TITLE SOLUTION STRUCTURE OF BACTERIOPHAGE LAMBDA GPW
COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEAD-TO-TAIL JOINING PROTEIN W; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: GPW; COMPND 5 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROBACTERIA PHAGE LAMBDA; SOURCE 3 ORGANISM_TAXID: 10710; SOURCE 4 GENE: W; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(LAMBDADE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET21D
KEYWDS NOVEL FOLD; TWO HELICES, ONE TWO-STRANDED BETA-SHEET, VIRAL KEYWDS 2 PROTEIN
EXPDTA SOLUTION NMR
NUMMDL 15
AUTHOR K.L.MAXWELL,A.A.YEE,V.BOOTH,C.H.ARROWSMITH,M.GOLD, AUTHOR 2 A.R.DAVIDSON
REVDAT 3 24-FEB-09 1HYW 1 VERSN REVDAT 2 31-DEC-02 1HYW 1 REMARK REVDAT 1 25-APR-01 1HYW 0
JRNL AUTH K.L.MAXWELL,A.A.YEE,V.BOOTH,C.H.ARROWSMITH,M.GOLD, JRNL AUTH 2 A.R.DAVIDSON JRNL TITL THE SOLUTION STRUCTURE OF BACTERIOPHAGE LAMBDA JRNL TITL 2 PROTEIN W, A SMALL MORPHOGENETIC PROTEIN JRNL TITL 3 POSSESSING A NOVEL FOLD. JRNL REF J.MOL.BIOL. V. 308 9 2001 JRNL REFN ISSN 0022-2836 JRNL PMID 11302702 JRNL DOI 10.1006/JMBI.2001.4582
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.851 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE STRUCTURES ARE BASED ON A TOTAL REMARK 3 OF 1293 RESTRAINTS, 1171 ARE NOE-DERIVED DISTANCE CONSTRAINTS, REMARK 3 72 DIHEDRAL ANGLE RESTRAINTS,50 DISTANCE RESTRAINTS FROM REMARK 3 HYDROGEN BONDS.
REMARK 4 REMARK 4 1HYW COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 24-JAN-01. REMARK 100 THE RCSB ID CODE IS RCSB012697.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 200MM NACL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.5MM GPW U-15N, 13C; 10MM REMARK 210 PHOSPHATE BUFFER NA, 200MM REMARK 210 NACL,90% H2O,10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY, 3D_ REMARK 210 15N-SEPARATED_NOESY, HNHA REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ, 600 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : X-PLOR 3.851, NMRPIPE 1.7, REMARK 210 NMRVIEW 3.0 REMARK 210 METHOD USED : DISTANCE GEOMETRY SIMULATED REMARK 210 ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 50 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 15 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE NMR REMARK 210 SPECTROSCOPY.
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-15 REMARK 465 RES C SSSEQI REMARK 465 ARG A 59 REMARK 465 ARG A 60 REMARK 465 ARG A 61 REMARK 465 GLY A 62 REMARK 465 PRO A 63 REMARK 465 ALA A 64 REMARK 465 GLY A 65 REMARK 465 PHE A 66 REMARK 465 TYR A 67 REMARK 465 VAL A 68
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 THR A 19 -66.39 -149.28 REMARK 500 1 LYS A 21 -163.72 -53.22 REMARK 500 1 ARG A 22 -36.96 -162.53 REMARK 500 1 ASP A 29 52.30 -101.49 REMARK 500 1 THR A 36 -154.89 -125.36 REMARK 500 1 ALA A 37 39.82 -96.54 REMARK 500 1 THR A 54 158.45 -45.87 REMARK 500 2 THR A 2 99.80 68.19 REMARK 500 2 ARG A 3 50.35 -115.51 REMARK 500 2 LYS A 21 -164.03 -52.68 REMARK 500 2 ARG A 22 -42.40 -155.10 REMARK 500 2 ASP A 29 39.74 -96.16 REMARK 500 2 THR A 36 -162.84 -123.55 REMARK 500 2 ALA A 37 43.56 -88.95 REMARK 500 2 THR A 38 -54.74 -131.21 REMARK 500 2 GLN A 53 -89.46 -76.78 REMARK 500 2 THR A 54 164.71 51.53 REMARK 500 2 MET A 56 79.55 54.49 REMARK 500 2 THR A 57 118.35 -161.99 REMARK 500 3 THR A 2 58.42 -143.75 REMARK 500 3 THR A 19 -67.15 -154.13 REMARK 500 3 LYS A 21 -166.07 -52.89 REMARK 500 3 ARG A 22 -41.62 -155.19 REMARK 500 3 THR A 36 -162.22 -123.98 REMARK 500 3 ALA A 37 43.49 -89.06 REMARK 500 3 THR A 38 -55.83 -131.18 REMARK 500 3 GLN A 53 -104.37 -71.93 REMARK 500 3 THR A 54 161.09 54.43 REMARK 500 3 MET A 56 89.28 57.43 REMARK 500 4 THR A 2 118.77 -163.67 REMARK 500 4 THR A 19 61.91 -152.22 REMARK 500 4 LYS A 21 -158.64 -54.01 REMARK 500 4 ARG A 22 -45.06 -166.19 REMARK 500 4 ASP A 29 47.56 -96.81 REMARK 500 4 THR A 36 -156.90 -125.64 REMARK 500 4 THR A 54 157.65 -37.80 REMARK 500 5 THR A 2 -48.83 177.78 REMARK 500 5 ARG A 3 72.89 -111.15 REMARK 500 5 THR A 19 -68.34 -152.20 REMARK 500 5 LYS A 21 -166.94 -52.21 REMARK 500 5 ARG A 22 -43.13 -154.07 REMARK 500 5 ASP A 29 44.45 -102.99 REMARK 500 5 THR A 36 -162.74 -124.00 REMARK 500 5 ALA A 37 43.70 -88.84 REMARK 500 5 THR A 38 -53.00 -131.67 REMARK 500 5 GLN A 53 -100.87 -73.20 REMARK 500 5 THR A 54 155.39 54.92 REMARK 500 5 THR A 57 124.87 61.13 REMARK 500 6 LYS A 21 -163.88 -53.11 REMARK 500 6 ARG A 22 -40.88 -155.82 REMARK 500 6 THR A 36 -163.02 -124.87 REMARK 500 6 ALA A 37 43.77 -88.52 REMARK 500 6 THR A 38 -55.30 -131.76 REMARK 500 6 THR A 54 155.03 -43.50 REMARK 500 7 THR A 2 51.69 -99.55 REMARK 500 7 ARG A 3 -70.89 -85.86 REMARK 500 7 THR A 19 -66.88 -148.97 REMARK 500 7 LYS A 21 -166.46 -52.52 REMARK 500 7 ARG A 22 -41.98 -155.27 REMARK 500 7 THR A 36 -161.66 -125.77 REMARK 500 7 ALA A 37 41.77 -89.46 REMARK 500 7 THR A 38 -51.76 -130.29 REMARK 500 7 THR A 54 155.76 -41.38 REMARK 500 8 THR A 2 76.15 50.49 REMARK 500 8 THR A 19 -67.96 -150.85 REMARK 500 8 LYS A 21 -166.42 -52.73 REMARK 500 8 ARG A 22 -42.56 -154.22 REMARK 500 8 THR A 36 -163.03 -124.12 REMARK 500 8 ALA A 37 44.57 -88.82 REMARK 500 8 THR A 38 -53.95 -134.33 REMARK 500 8 GLN A 53 -97.46 -74.47 REMARK 500 8 THR A 54 155.60 54.15 REMARK 500 9 ARG A 3 -52.28 -140.59 REMARK 500 9 THR A 19 -68.90 -153.20 REMARK 500 9 LYS A 21 -166.22 -52.66 REMARK 500 9 ARG A 22 -42.19 -155.18 REMARK 500 9 THR A 36 -160.66 -124.74 REMARK 500 9 ALA A 37 42.11 -89.70 REMARK 500 9 THR A 38 -52.58 -128.59 REMARK 500 9 GLN A 53 -106.83 -71.67 REMARK 500 9 THR A 54 159.44 55.48 REMARK 500 9 THR A 57 -162.48 66.85 REMARK 500 10 THR A 2 100.33 -51.06 REMARK 500 10 THR A 19 -69.62 -152.90 REMARK 500 10 LYS A 21 -167.22 -52.28 REMARK 500 10 ARG A 22 -43.75 -153.42 REMARK 500 10 LYS A 28 -83.94 -100.04 REMARK 500 10 ASP A 29 -41.84 -179.72 REMARK 500 10 THR A 36 -161.92 -124.49 REMARK 500 10 ALA A 37 42.11 -88.96 REMARK 500 10 THR A 38 -52.92 -130.23 REMARK 500 10 THR A 54 160.08 -38.29 REMARK 500 10 MET A 56 45.37 31.92 REMARK 500 11 ARG A 3 15.50 -146.34 REMARK 500 11 THR A 19 -68.76 -151.48 REMARK 500 11 LYS A 21 -166.89 -52.46 REMARK 500 11 ARG A 22 -43.93 -153.88 REMARK 500 11 THR A 36 -162.42 -125.39 REMARK 500 11 ALA A 37 42.96 -88.95 REMARK 500 11 THR A 38 -51.84 -131.56 REMARK 500 11 GLN A 53 -100.16 -73.26 REMARK 500 11 THR A 54 163.68 52.69 REMARK 500 12 THR A 2 -164.74 -160.53 REMARK 500 12 THR A 19 -65.96 -150.19 REMARK 500 12 LYS A 21 -163.38 -53.25 REMARK 500 12 ARG A 22 -38.66 -162.21 REMARK 500 12 ASP A 29 35.13 -99.59 REMARK 500 12 THR A 36 -155.78 -126.13 REMARK 500 12 ALA A 37 37.36 -96.36 REMARK 500 12 GLN A 53 -98.65 -74.20 REMARK 500 12 THR A 54 157.78 53.99 REMARK 500 13 THR A 2 179.90 48.69 REMARK 500 13 THR A 19 65.34 -152.79 REMARK 500 13 LYS A 21 -160.84 -53.51 REMARK 500 13 ARG A 22 -37.94 -164.02 REMARK 500 13 THR A 36 -154.44 -126.41 REMARK 500 13 ALA A 37 37.21 -97.49 REMARK 500 13 GLN A 53 -79.38 -78.67 REMARK 500 13 THR A 54 169.70 49.42 REMARK 500 13 MET A 56 87.35 46.07 REMARK 500 13 THR A 57 103.10 69.79 REMARK 500 14 THR A 2 -160.71 -68.89 REMARK 500 14 THR A 19 -63.53 -152.51 REMARK 500 14 LYS A 21 -164.12 -53.48 REMARK 500 14 ARG A 22 -37.22 -163.96 REMARK 500 14 THR A 36 -155.30 -124.64 REMARK 500 14 ALA A 37 35.67 -95.96 REMARK 500 14 THR A 54 161.79 -43.05 REMARK 500 14 MET A 56 102.47 -53.78 REMARK 500 15 THR A 19 -68.80 -150.51 REMARK 500 15 LYS A 21 -166.59 -52.48 REMARK 500 15 ARG A 22 -44.30 -154.46 REMARK 500 15 ALA A 37 48.57 -85.79 REMARK 500 15 THR A 38 -46.40 -141.47 REMARK 500 15 THR A 54 154.57 -39.89 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (11X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 1 GLN A 58 121.9 ALPHA-CARBON REMARK 500 8 GLN A 58 122.0 ALPHA-CARBON REMARK 500 9 GLN A 58 122.1 ALPHA-CARBON REMARK 500 10 GLN A 58 121.9 ALPHA-CARBON REMARK 500 15 GLN A 58 122.0 ALPHA-CARBON REMARK 500 REMARK 500 REMARK: NULL
DBREF 1HYW A 1 68 UNP P68660 VHTJ_LAMBD 1 68
SEQRES 1 A 68 MET THR ARG GLN GLU GLU LEU ALA ALA ALA ARG ALA ALA SEQRES 2 A 68 LEU HIS ASP LEU MET THR GLY LYS ARG VAL ALA THR VAL SEQRES 3 A 68 GLN LYS ASP GLY ARG ARG VAL GLU PHE THR ALA THR SER SEQRES 4 A 68 VAL SER ASP LEU LYS LYS TYR ILE ALA GLU LEU GLU VAL SEQRES 5 A 68 GLN THR GLY MET THR GLN ARG ARG ARG GLY PRO ALA GLY SEQRES 6 A 68 PHE TYR VAL
HELIX 1 1 ARG A 3 MET A 18 1 16 HELIX 2 2 SER A 39 THR A 54 1 16
SHEET 1 A 2 ALA A 24 GLN A 27 0 SHEET 2 A 2 ARG A 32 PHE A 35 -1 O VAL A 33 N VAL A 26
CISPEP 1 MET A 56 THR A 57 9 0.00
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000