10 20 30 40 50 60 70 80 1HWT - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER GENE REGULATION/DNA 17-SEP-98 1HWT
TITLE STRUCTURE OF A HAP1/DNA COMPLEX REVEALS DRAMATICALLY TITLE 2 ASYMMETRIC DNA BINDING BY A HOMODIMERIC PROTEIN
COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA (5'- COMPND 3 D(*GP*CP*GP*CP*TP*AP*TP*TP*AP*TP*CP*GP*CP*TP*AP*TP*TP*AP*GP COMPND 4 *C)-3'); COMPND 5 CHAIN: A, E; COMPND 6 FRAGMENT: UPSTREAM ACTIVATION SEQUENCE; COMPND 7 SYNONYM: UAS CYC7; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: DNA (5'- COMPND 11 D(*GP*CP*TP*AP*AP*TP*AP*GP*CP*GP*AP*TP*AP*AP*TP*AP*GP*CP*GP COMPND 12 *C)-3'); COMPND 13 CHAIN: B, F; COMPND 14 FRAGMENT: UPSTREAM ACTIVATION SEQUENCE; COMPND 15 SYNONYM: UAS CYC7; COMPND 16 ENGINEERED: YES; COMPND 17 MOL_ID: 3; COMPND 18 MOLECULE: PROTEIN (HEME ACTIVATOR PROTEIN); COMPND 19 CHAIN: C, D, G, H; COMPND 20 FRAGMENT: DNA BINDING DOMAIN; COMPND 21 SYNONYM: HAP1, CYP1 ACTIVATORY PROTEIN; COMPND 22 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 OTHER_DETAILS: SEQUENCE FROM SACCHAROMYCES CEREVISIAE; SOURCE 4 MOL_ID: 2; SOURCE 5 SYNTHETIC: YES; SOURCE 6 OTHER_DETAILS: SEQUENCE FROM SACCHAROMYCES CEREVISIAE; SOURCE 7 MOL_ID: 3; SOURCE 8 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 9 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 10 ORGANISM_TAXID: 4932; SOURCE 11 STRAIN: BWG-1-7A-DCYC1; SOURCE 12 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 13 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 14 EXPRESSION_SYSTEM_STRAIN: BL21 LYSS; SOURCE 15 EXPRESSION_SYSTEM_VECTOR_TYPE: LAC; SOURCE 16 EXPRESSION_SYSTEM_PLASMID: PRSETA
KEYWDS TRANSCRIPTION FACTOR, ASYMMETRY, GAL4, COMPLEX KEYWDS 2 ACTIVATOR/DNA, GENE REGULATION/DNA COMPLEX
EXPDTA X-RAY DIFFRACTION
AUTHOR D.A.KING,L.ZHANG,L.GUARENTE,R.MARMORSTEIN
REVDAT 2 24-FEB-09 1HWT 1 VERSN REVDAT 1 10-NOV-99 1HWT 0
JRNL AUTH D.A.KING,L.ZHANG,L.GUARENTE,R.MARMORSTEIN JRNL TITL STRUCTURE OF A HAP1-DNA COMPLEX REVEALS JRNL TITL 2 DRAMATICALLY ASYMMETRIC DNA BINDING BY A JRNL TITL 3 HOMODIMERIC PROTEIN. JRNL REF NAT.STRUCT.BIOL. V. 6 64 1999 JRNL REFN ISSN 1072-8368 JRNL PMID 9886294 JRNL DOI 10.1038/4940
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.851 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 8.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 1000000.000 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0010 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 82.2 REMARK 3 NUMBER OF REFLECTIONS : 20768 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.246 REMARK 3 FREE R VALUE : 0.291 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2098 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 8 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.61 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 83.30 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 1975 REMARK 3 BIN R VALUE (WORKING SET) : 0.3170 REMARK 3 BIN FREE R VALUE : 0.3420 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 10.00 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 219 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2367 REMARK 3 NUCLEIC ACID ATOMS : 1628 REMARK 3 HETEROGEN ATOMS : 9 REMARK 3 SOLVENT ATOMS : 58 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.60 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 1.40 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; 2.500 REMARK 3 REMARK 3 NCS MODEL : RESTRAINTS REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; 300 REMARK 3 GROUP 1 B-FACTOR (A**2) : 1.332 ; 1 REMARK 3 GROUP 2 POSITIONAL (A) : NULL ; 300 REMARK 3 GROUP 2 B-FACTOR (A**2) : 0.959 ; 1 REMARK 3 GROUP 3 POSITIONAL (A) : NULL ; 300 REMARK 3 GROUP 3 B-FACTOR (A**2) : 1.339 ; 1 REMARK 3 GROUP 4 POSITIONAL (A) : NULL ; 300 REMARK 3 GROUP 4 B-FACTOR (A**2) : 1.133 ; 1 REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : DNA-RNA_REP.PARAM REMARK 3 PARAMETER FILE 3 : PARAM.ZNC REMARK 3 PARAMETER FILE 4 : NULL REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : TOPHCSDX.PRO REMARK 3 TOPOLOGY FILE 2 : DNA-RNA.TOP REMARK 3 TOPOLOGY FILE 3 : TOPH.ZNC REMARK 3 TOPOLOGY FILE 4 : TOPH19.SOL REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1HWT COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-JUN-97 REMARK 200 TEMPERATURE (KELVIN) : 108 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU200 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : YALE MIRRORS REMARK 200 OPTICS : YALE MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : AREA DETECTOR REMARK 200 DETECTOR MANUFACTURER : SIEMENS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23274 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 8.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.0 REMARK 200 DATA REDUNDANCY : 1.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.08300 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: HAP1_18 REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.35 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.67 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.3 MM PROTEIN, 0.4 MM DNA DUPLEX, REMARK 280 5% PEG 2000, 100 MM KCL 5 MM MGCL2, 0.1 MM CO(NH3)6CL3, 25 MM REMARK 280 MES (PH 5.6), VAPOR DIFFUSION, HANGING DROP
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 42.80000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 47.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 42.85000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 47.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 42.80000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 42.85000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, F, G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG C 55 REMARK 465 LYS C 56 REMARK 465 ARG C 57 REMARK 465 ASN C 58 REMARK 465 SER C 129 REMARK 465 LYS C 130 REMARK 465 VAL C 131 REMARK 465 HIS C 132 REMARK 465 SER C 133 REMARK 465 SER C 134 REMARK 465 PRO C 135 REMARK 465 SER D 129 REMARK 465 LYS D 130 REMARK 465 VAL D 131 REMARK 465 HIS D 132 REMARK 465 SER D 133 REMARK 465 SER D 134 REMARK 465 PRO D 135 REMARK 465 ARG G 55 REMARK 465 LYS G 56 REMARK 465 ARG G 57 REMARK 465 ASN G 58 REMARK 465 SER G 129 REMARK 465 LYS G 130 REMARK 465 VAL G 131 REMARK 465 HIS G 132 REMARK 465 SER G 133 REMARK 465 SER G 134 REMARK 465 PRO G 135 REMARK 465 ARG H 55 REMARK 465 SER H 129 REMARK 465 LYS H 130 REMARK 465 VAL H 131 REMARK 465 HIS H 132 REMARK 465 SER H 133 REMARK 465 SER H 134 REMARK 465 PRO H 135
REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS(M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU D 114 CD1 CD2 REMARK 470 LYS H 56 CG CD CE NZ REMARK 470 LEU H 114 CD1 CD2
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS C 76 28.06 49.66 REMARK 500 LYS D 126 27.15 -67.10 REMARK 500 THR D 127 -52.23 -134.49 REMARK 500 LYS G 76 27.65 49.11 REMARK 500 LYS G 126 18.54 -60.68 REMARK 500 THR H 127 -83.40 -53.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 DG A 3 0.06 SIDE_CHAIN REMARK 500 DT A 10 0.07 SIDE_CHAIN REMARK 500 DG B 1 0.07 SIDE_CHAIN REMARK 500 DC B 9 0.06 SIDE_CHAIN REMARK 500 DA B 16 0.06 SIDE_CHAIN REMARK 500 DG F 1 0.06 SIDE_CHAIN REMARK 500 DA F 16 0.06 SIDE_CHAIN REMARK 500 REMARK 500 REMARK: NULL
REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 23 DISTANCE = 5.28 ANGSTROMS REMARK 525 HOH G 140 DISTANCE = 5.24 ANGSTROMS
REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 136 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS C 64 SG REMARK 620 2 CYS C 67 SG 102.1 REMARK 620 3 CYS C 74 SG 108.2 115.0 REMARK 620 4 CYS C 81 SG 102.9 114.5 112.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 137 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS C 64 SG REMARK 620 2 CYS C 81 SG 103.6 REMARK 620 3 CYS C 84 SG 110.4 107.9 REMARK 620 4 CYS C 93 SG 112.8 114.9 107.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN D 136 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS D 64 SG REMARK 620 2 CYS D 67 SG 101.8 REMARK 620 3 CYS D 74 SG 113.9 110.1 REMARK 620 4 CYS D 81 SG 99.5 111.5 118.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN D 137 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS D 64 SG REMARK 620 2 CYS D 81 SG 102.6 REMARK 620 3 CYS D 84 SG 117.6 106.2 REMARK 620 4 CYS D 93 SG 106.2 110.3 113.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN G 136 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS G 64 SG REMARK 620 2 CYS G 67 SG 105.9 REMARK 620 3 CYS G 74 SG 110.6 114.2 REMARK 620 4 CYS G 81 SG 101.3 114.2 109.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN G 137 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS G 64 SG REMARK 620 2 CYS G 81 SG 101.6 REMARK 620 3 CYS G 84 SG 112.5 109.5 REMARK 620 4 CYS G 93 SG 110.9 112.5 109.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN H 136 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS H 64 SG REMARK 620 2 CYS H 67 SG 102.8 REMARK 620 3 CYS H 74 SG 110.0 107.2 REMARK 620 4 CYS H 81 SG 101.9 115.2 118.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN H 137 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS H 64 SG REMARK 620 2 CYS H 81 SG 101.3 REMARK 620 3 CYS H 84 SG 112.3 105.8 REMARK 620 4 CYS H 93 SG 107.4 115.8 113.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN D 138 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS D 80 NE2 REMARK 620 2 HIS D 91 ND1 111.5 REMARK 620 3 HIS H 80 NE2 112.0 114.0 REMARK 620 4 HIS H 91 ND1 121.3 97.4 99.7 REMARK 620 N 1 2 3
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: ZN1 REMARK 800 EVIDENCE_CODE: UNKNOWN REMARK 800 SITE_DESCRIPTION: NULL REMARK 800 SITE_IDENTIFIER: ZN2 REMARK 800 EVIDENCE_CODE: UNKNOWN REMARK 800 SITE_DESCRIPTION: NULL REMARK 800 SITE_IDENTIFIER: ZN3 REMARK 800 EVIDENCE_CODE: UNKNOWN REMARK 800 SITE_DESCRIPTION: NULL REMARK 800 SITE_IDENTIFIER: ZN4 REMARK 800 EVIDENCE_CODE: UNKNOWN REMARK 800 SITE_DESCRIPTION: NULL REMARK 800 SITE_IDENTIFIER: ZN5 REMARK 800 EVIDENCE_CODE: UNKNOWN REMARK 800 SITE_DESCRIPTION: NULL REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN C 136 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN C 137 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN D 136 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN D 137 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN G 136 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN G 137 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN H 136 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN H 137 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN D 138
DBREF 1HWT C 55 135 UNP P12351 CYP1_YEAST 55 135 DBREF 1HWT D 55 135 UNP P12351 CYP1_YEAST 55 135 DBREF 1HWT G 55 135 UNP P12351 CYP1_YEAST 55 135 DBREF 1HWT H 55 135 UNP P12351 CYP1_YEAST 55 135 DBREF 1HWT A 1 20 PDB 1HWT 1HWT 1 20 DBREF 1HWT B 1 20 PDB 1HWT 1HWT 1 20 DBREF 1HWT E 1 20 PDB 1HWT 1HWT 1 20 DBREF 1HWT F 1 20 PDB 1HWT 1HWT 1 20
SEQRES 1 A 20 DG DC DG DC DT DA DT DT DA DT DC DG DC SEQRES 2 A 20 DT DA DT DT DA DG DC SEQRES 1 B 20 DG DC DT DA DA DT DA DG DC DG DA DT DA SEQRES 2 B 20 DA DT DA DG DC DG DC SEQRES 1 E 20 DG DC DG DC DT DA DT DT DA DT DC DG DC SEQRES 2 E 20 DT DA DT DT DA DG DC SEQRES 1 F 20 DG DC DT DA DA DT DA DG DC DG DA DT DA SEQRES 2 F 20 DA DT DA DG DC DG DC SEQRES 1 C 81 ARG LYS ARG ASN ARG ILE PRO LEU SER CYS THR ILE CYS SEQRES 2 C 81 ARG LYS ARG LYS VAL LYS CYS ASP LYS LEU ARG PRO HIS SEQRES 3 C 81 CYS GLN GLN CYS THR LYS THR GLY VAL ALA HIS LEU CYS SEQRES 4 C 81 HIS TYR MET GLU GLN THR TRP ALA GLU GLU ALA GLU LYS SEQRES 5 C 81 GLU LEU LEU LYS ASP ASN GLU LEU LYS LYS LEU ARG GLU SEQRES 6 C 81 ARG VAL LYS SER LEU GLU LYS THR LEU SER LYS VAL HIS SEQRES 7 C 81 SER SER PRO SEQRES 1 D 81 ARG LYS ARG ASN ARG ILE PRO LEU SER CYS THR ILE CYS SEQRES 2 D 81 ARG LYS ARG LYS VAL LYS CYS ASP LYS LEU ARG PRO HIS SEQRES 3 D 81 CYS GLN GLN CYS THR LYS THR GLY VAL ALA HIS LEU CYS SEQRES 4 D 81 HIS TYR MET GLU GLN THR TRP ALA GLU GLU ALA GLU LYS SEQRES 5 D 81 GLU LEU LEU LYS ASP ASN GLU LEU LYS LYS LEU ARG GLU SEQRES 6 D 81 ARG VAL LYS SER LEU GLU LYS THR LEU SER LYS VAL HIS SEQRES 7 D 81 SER SER PRO SEQRES 1 G 81 ARG LYS ARG ASN ARG ILE PRO LEU SER CYS THR ILE CYS SEQRES 2 G 81 ARG LYS ARG LYS VAL LYS CYS ASP LYS LEU ARG PRO HIS SEQRES 3 G 81 CYS GLN GLN CYS THR LYS THR GLY VAL ALA HIS LEU CYS SEQRES 4 G 81 HIS TYR MET GLU GLN THR TRP ALA GLU GLU ALA GLU LYS SEQRES 5 G 81 GLU LEU LEU LYS ASP ASN GLU LEU LYS LYS LEU ARG GLU SEQRES 6 G 81 ARG VAL LYS SER LEU GLU LYS THR LEU SER LYS VAL HIS SEQRES 7 G 81 SER SER PRO SEQRES 1 H 81 ARG LYS ARG ASN ARG ILE PRO LEU SER CYS THR ILE CYS SEQRES 2 H 81 ARG LYS ARG LYS VAL LYS CYS ASP LYS LEU ARG PRO HIS SEQRES 3 H 81 CYS GLN GLN CYS THR LYS THR GLY VAL ALA HIS LEU CYS SEQRES 4 H 81 HIS TYR MET GLU GLN THR TRP ALA GLU GLU ALA GLU LYS SEQRES 5 H 81 GLU LEU LEU LYS ASP ASN GLU LEU LYS LYS LEU ARG GLU SEQRES 6 H 81 ARG VAL LYS SER LEU GLU LYS THR LEU SER LYS VAL HIS SEQRES 7 H 81 SER SER PRO
HET ZN C 136 1 HET ZN C 137 1 HET ZN D 136 1 HET ZN D 137 1 HET ZN G 136 1 HET ZN G 137 1 HET ZN H 136 1 HET ZN H 137 1 HET ZN D 138 1
HETNAM ZN ZINC ION
FORMUL 9 ZN 9(ZN 2+) FORMUL 18 HOH *58(H2 O)
HELIX 1 1 THR C 65 ARG C 70 1 6 HELIX 2 2 GLN C 82 THR C 87 1 6 HELIX 3 3 ALA C 90 LEU C 92 5 3 HELIX 4 4 TRP C 100 GLU C 125 1 26 HELIX 5 5 THR D 65 ARG D 70 1 6 HELIX 6 6 GLN D 82 LYS D 86 1 5 HELIX 7 7 ALA D 90 LEU D 92 5 3 HELIX 8 8 GLU D 102 GLU D 125 1 24 HELIX 9 9 THR G 65 ARG G 70 1 6 HELIX 10 10 GLN G 82 THR G 87 1 6 HELIX 11 11 ALA G 90 LEU G 92 5 3 HELIX 12 12 TRP G 100 GLU G 125 1 26 HELIX 13 13 THR H 65 ARG H 70 1 6 HELIX 14 14 GLN H 82 LYS H 86 1 5 HELIX 15 15 ALA H 90 LEU H 92 5 3 HELIX 16 16 GLU H 102 LYS H 126 1 25
LINK ZN ZN C 136 SG CYS C 64 1555 1555 2.39 LINK ZN ZN C 136 SG CYS C 67 1555 1555 2.30 LINK ZN ZN C 136 SG CYS C 74 1555 1555 2.39 LINK ZN ZN C 136 SG CYS C 81 1555 1555 2.28 LINK ZN ZN C 137 SG CYS C 64 1555 1555 2.26 LINK ZN ZN C 137 SG CYS C 81 1555 1555 2.38 LINK ZN ZN C 137 SG CYS C 84 1555 1555 2.36 LINK ZN ZN C 137 SG CYS C 93 1555 1555 2.30 LINK ZN ZN D 136 SG CYS D 64 1555 1555 2.38 LINK ZN ZN D 136 SG CYS D 67 1555 1555 2.36 LINK ZN ZN D 136 SG CYS D 74 1555 1555 2.24 LINK ZN ZN D 136 SG CYS D 81 1555 1555 2.38 LINK ZN ZN D 137 SG CYS D 64 1555 1555 2.32 LINK ZN ZN D 137 SG CYS D 81 1555 1555 2.34 LINK ZN ZN D 137 SG CYS D 84 1555 1555 2.26 LINK ZN ZN D 137 SG CYS D 93 1555 1555 2.35 LINK ZN ZN G 136 SG CYS G 64 1555 1555 2.32 LINK ZN ZN G 136 SG CYS G 67 1555 1555 2.30 LINK ZN ZN G 136 SG CYS G 74 1555 1555 2.33 LINK ZN ZN G 136 SG CYS G 81 1555 1555 2.38 LINK ZN ZN G 137 SG CYS G 64 1555 1555 2.32 LINK ZN ZN G 137 SG CYS G 81 1555 1555 2.37 LINK ZN ZN G 137 SG CYS G 84 1555 1555 2.31 LINK ZN ZN G 137 SG CYS G 93 1555 1555 2.31 LINK ZN ZN H 136 SG CYS H 64 1555 1555 2.38 LINK ZN ZN H 136 SG CYS H 67 1555 1555 2.31 LINK ZN ZN H 136 SG CYS H 74 1555 1555 2.33 LINK ZN ZN H 136 SG CYS H 81 1555 1555 2.30 LINK ZN ZN H 137 SG CYS H 64 1555 1555 2.34 LINK ZN ZN H 137 SG CYS H 81 1555 1555 2.35 LINK ZN ZN H 137 SG CYS H 84 1555 1555 2.34 LINK ZN ZN H 137 SG CYS H 93 1555 1555 2.28 LINK ZN ZN D 138 NE2 HIS D 80 1555 1555 1.76 LINK ZN ZN D 138 ND1 HIS D 91 1555 1555 2.00 LINK ZN ZN D 138 NE2 HIS H 80 1555 1555 1.97 LINK ZN ZN D 138 ND1 HIS H 91 1555 1555 2.08
CISPEP 1 ARG C 78 PRO C 79 0 -0.20 CISPEP 2 ARG D 78 PRO D 79 0 0.39 CISPEP 3 ARG G 78 PRO G 79 0 0.47 CISPEP 4 ARG H 78 PRO H 79 0 0.45
SITE 1 ZN1 6 CYS C 64 CYS C 67 CYS C 74 CYS C 81 SITE 2 ZN1 6 CYS C 84 CYS C 93 SITE 1 ZN2 6 CYS D 64 CYS D 67 CYS D 74 CYS D 81 SITE 2 ZN2 6 CYS D 84 CYS D 93 SITE 1 ZN3 6 CYS G 64 CYS G 67 CYS G 74 CYS G 81 SITE 2 ZN3 6 CYS G 84 CYS G 93 SITE 1 ZN4 6 CYS H 64 CYS H 67 CYS H 74 CYS H 81 SITE 2 ZN4 6 CYS H 84 CYS H 93 SITE 1 ZN5 4 HIS H 80 HIS H 91 HIS D 91 HIS D 80 SITE 1 AC1 5 CYS C 64 CYS C 67 CYS C 74 CYS C 81 SITE 2 AC1 5 ZN C 137 SITE 1 AC2 5 CYS C 64 CYS C 81 CYS C 84 CYS C 93 SITE 2 AC2 5 ZN C 136 SITE 1 AC3 5 CYS D 64 CYS D 67 CYS D 74 CYS D 81 SITE 2 AC3 5 ZN D 137 SITE 1 AC4 5 CYS D 64 CYS D 81 CYS D 84 CYS D 93 SITE 2 AC4 5 ZN D 136 SITE 1 AC5 5 CYS G 64 CYS G 67 CYS G 74 CYS G 81 SITE 2 AC5 5 ZN G 137 SITE 1 AC6 5 CYS G 64 CYS G 81 CYS G 84 CYS G 93 SITE 2 AC6 5 ZN G 136 SITE 1 AC7 5 CYS H 64 CYS H 67 CYS H 74 CYS H 81 SITE 2 AC7 5 ZN H 137 SITE 1 AC8 5 CYS H 64 CYS H 81 CYS H 84 CYS H 93 SITE 2 AC8 5 ZN H 136 SITE 1 AC9 4 HIS D 80 HIS D 91 HIS H 80 HIS H 91
CRYST1 85.600 85.700 94.000 90.00 90.00 90.00 P 21 21 21 16
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.011682 0.000000 0.000000 0.00000
SCALE2 0.000000 0.011669 0.000000 0.00000
SCALE3 0.000000 0.000000 0.010638 0.00000
MTRIX1 1 -0.995828 0.056911 0.071327 16.93800 1
MTRIX2 1 0.077273 0.110232 0.990897 13.78400 1
MTRIX3 1 0.048531 0.992275 -0.114169 -17.15000 1