10 20 30 40 50 60 70 80 1HS6 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER HYDROLASE 24-DEC-00 1HS6
TITLE STRUCTURE OF LEUKOTRIENE A4 HYDROLASE COMPLEXED WITH TITLE 2 BESTATIN.
COMPND MOL_ID: 1; COMPND 2 MOLECULE: LEUKOTRIENE A-4 HYDROLASE; COMPND 3 CHAIN: A; COMPND 4 EC: 3.3.2.6; COMPND 5 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PT3-MB4
KEYWDS PROTEIN-INHIBITOR COMPLEX, ALPHA-BETA PROTEIN, HYDROLASE
EXPDTA X-RAY DIFFRACTION
AUTHOR M.M.G.M.THUNNISSEN,P.N.NORDLUND,J.Z.HAEGGSTROM
REVDAT 4 24-FEB-09 1HS6 1 VERSN REVDAT 3 01-APR-03 1HS6 1 JRNL REVDAT 2 31-DEC-02 1HS6 1 REMARK REVDAT 1 24-JUN-01 1HS6 0
JRNL AUTH M.M.THUNNISSEN,P.NORDLUND,J.Z.HAEGGSTROM JRNL TITL CRYSTAL STRUCTURE OF HUMAN LEUKOTRIENE A(4) JRNL TITL 2 HYDROLASE, A BIFUNCTIONAL ENZYME IN INFLAMMATION. JRNL REF NAT.STRUCT.BIOL. V. 8 131 2001 JRNL REFN ISSN 1072-8368 JRNL PMID 11175901 JRNL DOI 10.1038/84117
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : TNT REMARK 3 AUTHORS : TRONRUD,TEN EYCK,MATTHEWS REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 54827 REMARK 3 REMARK 3 USING DATA ABOVE SIGMA CUTOFF. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.185 REMARK 3 R VALUE (WORKING SET) : 0.188 REMARK 3 FREE R VALUE : 0.247 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 2460 REMARK 3 REMARK 3 USING ALL DATA, NO SIGMA CUTOFF. REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : 0.1850 REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : NULL REMARK 3 FREE R VALUE (NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : 54827 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4876 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 35 REMARK 3 SOLVENT ATOMS : 551 REMARK 3 REMARK 3 WILSON B VALUE (FROM FCALC, A**2) : 20.906 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. RMS WEIGHT COUNT REMARK 3 BOND LENGTHS (A) : 0.010 ; NULL ; NULL REMARK 3 BOND ANGLES (DEGREES) : 2.200 ; NULL ; NULL REMARK 3 TORSION ANGLES (DEGREES) : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES (DEGREES) : NULL ; NULL ; NULL REMARK 3 TRIGONAL CARBON PLANES (A) : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES (A) : NULL ; NULL ; NULL REMARK 3 ISOTROPIC THERMAL FACTORS (A**2) : NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS (A) : NULL ; NULL ; NULL REMARK 3 REMARK 3 INCORRECT CHIRAL-CENTERS (COUNT) : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 RESTRAINT LIBRARIES. REMARK 3 STEREOCHEMISTRY : ENGH & HUBER REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1HS6 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 28-DEC-00. REMARK 100 THE RCSB ID CODE IS RCSB012557.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-JUL-98 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.8 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM14 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.992, 1.3838, 1.3842, 0.8856 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : AREA DETECTOR REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 54827 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 34.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 200 DATA REDUNDANCY : 4.700 REMARK 200 R MERGE (I) : 0.04300 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 6.5900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.05 REMARK 200 COMPLETENESS FOR SHELL (%) : 89.6 REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : 0.18600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: MLPHARE, SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.63 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.71 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG8000, IMIDAZOLE, SODIUM ACETATE, REMARK 280 YTTERBIUM CHLORIDE, BESTATIN, PH 6.8, LIQUID DIFFUSION, REMARK 280 TEMPERATURE 298K
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 33.80000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 66.75000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 33.80000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 66.75000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 0
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 1493 O HOH A 1493 2665 0.57 REMARK 500 O HOH A 1652 O HOH A 1652 2665 1.46 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 2 CD GLU A 2 OE2 0.068 REMARK 500 GLU A 62 CD GLU A 62 OE2 0.070 REMARK 500 GLU A 77 CD GLU A 77 OE2 0.070 REMARK 500 GLU A 233 CD GLU A 233 OE2 0.070 REMARK 500 GLU A 296 CD GLU A 296 OE2 0.068 REMARK 500 GLU A 401 CD GLU A 401 OE2 0.071 REMARK 500 GLU A 590 CD GLU A 590 OE2 0.068 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 24 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 ASP A 28 CB - CG - OD1 ANGL. DEV. = 6.0 DEGREES REMARK 500 ASP A 28 CB - CG - OD2 ANGL. DEV. = -6.4 DEGREES REMARK 500 ASP A 47 CB - CG - OD2 ANGL. DEV. = -6.4 DEGREES REMARK 500 ASP A 55 CB - CG - OD1 ANGL. DEV. = 6.7 DEGREES REMARK 500 ASP A 55 CB - CG - OD2 ANGL. DEV. = -7.3 DEGREES REMARK 500 ASP A 58 CB - CG - OD2 ANGL. DEV. = -5.5 DEGREES REMARK 500 ASP A 148 CB - CG - OD1 ANGL. DEV. = 5.9 DEGREES REMARK 500 ASP A 148 CB - CG - OD2 ANGL. DEV. = -5.6 DEGREES REMARK 500 ARG A 174 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 ASP A 175 CB - CG - OD1 ANGL. DEV. = 5.8 DEGREES REMARK 500 ASP A 175 CB - CG - OD2 ANGL. DEV. = -7.6 DEGREES REMARK 500 PRO A 181 C - N - CD ANGL. DEV. = -35.1 DEGREES REMARK 500 ILE A 188 CB - CA - C ANGL. DEV. = 13.4 DEGREES REMARK 500 ASP A 246 CB - CG - OD1 ANGL. DEV. = 6.1 DEGREES REMARK 500 ASP A 246 CB - CG - OD2 ANGL. DEV. = -6.2 DEGREES REMARK 500 ASP A 257 CB - CG - OD1 ANGL. DEV. = 5.7 DEGREES REMARK 500 ASP A 257 CB - CG - OD2 ANGL. DEV. = -5.9 DEGREES REMARK 500 ASP A 312 CB - CG - OD1 ANGL. DEV. = 5.9 DEGREES REMARK 500 ARG A 331 NE - CZ - NH1 ANGL. DEV. = 3.9 DEGREES REMARK 500 ARG A 338 NE - CZ - NH1 ANGL. DEV. = 4.3 DEGREES REMARK 500 ASP A 368 CB - CG - OD1 ANGL. DEV. = 6.6 DEGREES REMARK 500 ASP A 371 CB - CG - OD1 ANGL. DEV. = 5.8 DEGREES REMARK 500 ASP A 371 CB - CG - OD2 ANGL. DEV. = -7.9 DEGREES REMARK 500 ASP A 373 CB - CG - OD1 ANGL. DEV. = 6.3 DEGREES REMARK 500 ASP A 373 CB - CG - OD2 ANGL. DEV. = -5.6 DEGREES REMARK 500 PHE A 432 CB - CG - CD2 ANGL. DEV. = 4.9 DEGREES REMARK 500 PHE A 432 CB - CG - CD1 ANGL. DEV. = -4.5 DEGREES REMARK 500 ASP A 434 CB - CG - OD1 ANGL. DEV. = 7.2 DEGREES REMARK 500 ASP A 434 CB - CG - OD2 ANGL. DEV. = -6.3 DEGREES REMARK 500 ASP A 437 CB - CG - OD2 ANGL. DEV. = -6.7 DEGREES REMARK 500 ASP A 443 CB - CG - OD2 ANGL. DEV. = -6.6 DEGREES REMARK 500 ASP A 481 CB - CG - OD1 ANGL. DEV. = 9.1 DEGREES REMARK 500 ASP A 481 CB - CG - OD2 ANGL. DEV. = -7.6 DEGREES REMARK 500 ASP A 482 CB - CG - OD1 ANGL. DEV. = 5.5 DEGREES REMARK 500 ASP A 490 CB - CG - OD1 ANGL. DEV. = 6.2 DEGREES REMARK 500 ASP A 493 CB - CG - OD2 ANGL. DEV. = -6.2 DEGREES REMARK 500 ARG A 509 NE - CZ - NH1 ANGL. DEV. = 5.5 DEGREES REMARK 500 ARG A 509 NE - CZ - NH2 ANGL. DEV. = -3.7 DEGREES REMARK 500 ARG A 535 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 ASP A 549 CB - CG - OD1 ANGL. DEV. = 6.2 DEGREES REMARK 500 ASP A 578 CB - CG - OD1 ANGL. DEV. = 6.5 DEGREES REMARK 500 ASP A 578 CB - CG - OD2 ANGL. DEV. = -7.7 DEGREES REMARK 500 ARG A 586 NE - CZ - NH2 ANGL. DEV. = -3.0 DEGREES REMARK 500 ASP A 606 CB - CG - OD1 ANGL. DEV. = 5.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 79 69.85 -116.50 REMARK 500 SER A 80 -118.46 38.04 REMARK 500 ASN A 97 2.82 58.66 REMARK 500 LYS A 126 -7.19 73.76 REMARK 500 GLU A 182 48.86 -162.81 REMARK 500 GLU A 271 40.89 -64.97 REMARK 500 CYS A 274 -12.57 78.25 REMARK 500 SER A 300 -9.27 -57.95 REMARK 500 TRP A 301 -68.29 -121.37 REMARK 500 PHE A 432 38.53 -92.89 REMARK 500 REMARK 500 REMARK: NULL
REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1390 DISTANCE = 5.38 ANGSTROMS REMARK 525 HOH A1558 DISTANCE = 7.44 ANGSTROMS REMARK 525 HOH A1573 DISTANCE = 9.93 ANGSTROMS
REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 701 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 295 NE2 REMARK 620 2 HIS A 299 NE2 103.3 REMARK 620 3 GLU A 318 OE1 101.5 100.5 REMARK 620 4 BES A 901 O2 105.0 90.6 148.0 REMARK 620 5 BES A 901 O3 85.9 165.9 87.9 76.5 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 YB A 801 YB REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 481 OD1 REMARK 620 2 HOH A1260 O 71.6 REMARK 620 3 ASP A 481 OD2 56.6 83.1 REMARK 620 4 ASP A 422 OD1 139.1 72.4 135.6 REMARK 620 5 HOH A1259 O 72.0 80.5 128.7 83.6 REMARK 620 6 ASP A 422 OD2 139.5 124.4 149.2 56.2 74.7 REMARK 620 7 HOH A1290 O 74.3 145.0 84.8 134.9 81.9 78.8 REMARK 620 8 ASP A 426 OD1 117.8 74.8 68.7 69.4 147.7 102.6 129.8 REMARK 620 9 ASP A 426 OD2 131.3 130.0 80.8 87.3 143.3 70.7 79.7 55.3 REMARK 620 10 ASP A 481 CG 27.3 76.8 29.4 148.2 99.3 155.2 76.5 REMARK 620 95.0 106.8 REMARK 620 N 1 2 3 4 5 6 7 8 REMARK 620 9 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 YB A 803 YB REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A1409 O REMARK 620 2 GLU A 107 OE1 121.1 REMARK 620 3 GLU A 107 OE2 77.2 53.4 REMARK 620 4 GLU A 127 OE1 104.2 114.1 162.3 REMARK 620 5 HOH A1541 O 115.6 109.8 108.8 86.7 REMARK 620 6 GLU A 127 OE2 64.3 116.3 124.1 46.0 123.6 REMARK 620 N 1 2 3 4 5
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 701 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE YB A 801 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE YB A 802 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE YB A 803 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 1101 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BES A 901 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IMD A 1001
DBREF 1HS6 A 0 610 UNP P09960 LKHA4_HUMAN 1 611
SEQRES 1 A 611 MET PRO GLU ILE VAL ASP THR CYS SER LEU ALA SER PRO SEQRES 2 A 611 ALA SER VAL CYS ARG THR LYS HIS LEU HIS LEU ARG CYS SEQRES 3 A 611 SER VAL ASP PHE THR ARG ARG THR LEU THR GLY THR ALA SEQRES 4 A 611 ALA LEU THR VAL GLN SER GLN GLU ASP ASN LEU ARG SER SEQRES 5 A 611 LEU VAL LEU ASP THR LYS ASP LEU THR ILE GLU LYS VAL SEQRES 6 A 611 VAL ILE ASN GLY GLN GLU VAL LYS TYR ALA LEU GLY GLU SEQRES 7 A 611 ARG GLN SER TYR LYS GLY SER PRO MET GLU ILE SER LEU SEQRES 8 A 611 PRO ILE ALA LEU SER LYS ASN GLN GLU ILE VAL ILE GLU SEQRES 9 A 611 ILE SER PHE GLU THR SER PRO LYS SER SER ALA LEU GLN SEQRES 10 A 611 TRP LEU THR PRO GLU GLN THR SER GLY LYS GLU HIS PRO SEQRES 11 A 611 TYR LEU PHE SER GLN CYS GLN ALA ILE HIS CYS ARG ALA SEQRES 12 A 611 ILE LEU PRO CYS GLN ASP THR PRO SER VAL LYS LEU THR SEQRES 13 A 611 TYR THR ALA GLU VAL SER VAL PRO LYS GLU LEU VAL ALA SEQRES 14 A 611 LEU MET SER ALA ILE ARG ASP GLY GLU THR PRO ASP PRO SEQRES 15 A 611 GLU ASP PRO SER ARG LYS ILE TYR LYS PHE ILE GLN LYS SEQRES 16 A 611 VAL PRO ILE PRO CYS TYR LEU ILE ALA LEU VAL VAL GLY SEQRES 17 A 611 ALA LEU GLU SER ARG GLN ILE GLY PRO ARG THR LEU VAL SEQRES 18 A 611 TRP SER GLU LYS GLU GLN VAL GLU LYS SER ALA TYR GLU SEQRES 19 A 611 PHE SER GLU THR GLU SER MET LEU LYS ILE ALA GLU ASP SEQRES 20 A 611 LEU GLY GLY PRO TYR VAL TRP GLY GLN TYR ASP LEU LEU SEQRES 21 A 611 VAL LEU PRO PRO SER PHE PRO TYR GLY GLY MET GLU ASN SEQRES 22 A 611 PRO CYS LEU THR PHE VAL THR PRO THR LEU LEU ALA GLY SEQRES 23 A 611 ASP LYS SER LEU SER ASN VAL ILE ALA HIS GLU ILE SER SEQRES 24 A 611 HIS SER TRP THR GLY ASN LEU VAL THR ASN LYS THR TRP SEQRES 25 A 611 ASP HIS PHE TRP LEU ASN GLU GLY HIS THR VAL TYR LEU SEQRES 26 A 611 GLU ARG HIS ILE CYS GLY ARG LEU PHE GLY GLU LYS PHE SEQRES 27 A 611 ARG HIS PHE ASN ALA LEU GLY GLY TRP GLY GLU LEU GLN SEQRES 28 A 611 ASN SER VAL LYS THR PHE GLY GLU THR HIS PRO PHE THR SEQRES 29 A 611 LYS LEU VAL VAL ASP LEU THR ASP ILE ASP PRO ASP VAL SEQRES 30 A 611 ALA TYR SER SER VAL PRO TYR GLU LYS GLY PHE ALA LEU SEQRES 31 A 611 LEU PHE TYR LEU GLU GLN LEU LEU GLY GLY PRO GLU ILE SEQRES 32 A 611 PHE LEU GLY PHE LEU LYS ALA TYR VAL GLU LYS PHE SER SEQRES 33 A 611 TYR LYS SER ILE THR THR ASP ASP TRP LYS ASP PHE LEU SEQRES 34 A 611 TYR SER TYR PHE LYS ASP LYS VAL ASP VAL LEU ASN GLN SEQRES 35 A 611 VAL ASP TRP ASN ALA TRP LEU TYR SER PRO GLY LEU PRO SEQRES 36 A 611 PRO ILE LYS PRO ASN TYR ASP MET THR LEU THR ASN ALA SEQRES 37 A 611 CYS ILE ALA LEU SER GLN ARG TRP ILE THR ALA LYS GLU SEQRES 38 A 611 ASP ASP LEU ASN SER PHE ASN ALA THR ASP LEU LYS ASP SEQRES 39 A 611 LEU SER SER HIS GLN LEU ASN GLU PHE LEU ALA GLN THR SEQRES 40 A 611 LEU GLN ARG ALA PRO LEU PRO LEU GLY HIS ILE LYS ARG SEQRES 41 A 611 MET GLN GLU VAL TYR ASN PHE ASN ALA ILE ASN ASN SER SEQRES 42 A 611 GLU ILE ARG PHE ARG TRP LEU ARG LEU CYS ILE GLN SER SEQRES 43 A 611 LYS TRP GLU ASP ALA ILE PRO LEU ALA LEU LYS MET ALA SEQRES 44 A 611 THR GLU GLN GLY ARG MET LYS PHE THR ARG PRO LEU PHE SEQRES 45 A 611 LYS ASP LEU ALA ALA PHE ASP LYS SER HIS ASP GLN ALA SEQRES 46 A 611 VAL ARG THR TYR GLN GLU HIS LYS ALA SER MET HIS PRO SEQRES 47 A 611 VAL THR ALA MET LEU VAL GLY LYS ASP LEU LYS VAL ASP
HET ZN A 701 1 HET YB A 801 1 HET YB A 802 1 HET YB A 803 1 HET ACT A1101 4 HET BES A 901 22 HET IMD A1001 5
HETNAM ZN ZINC ION HETNAM YB YTTERBIUM (III) ION HETNAM ACT ACETATE ION HETNAM BES 2-(3-AMINO-2-HYDROXY-4-PHENYL-BUTYRYLAMINO)-4-METHYL- HETNAM 2 BES PENTANOIC ACID HETNAM IMD IMIDAZOLE
HETSYN BES BESTATIN
FORMUL 2 ZN ZN 2+ FORMUL 3 YB 3(YB 3+) FORMUL 6 ACT C2 H3 O2 1- FORMUL 7 BES C16 H24 N2 O4 FORMUL 8 IMD C3 H5 N2 1+ FORMUL 9 HOH *551(H2 O)
HELIX 1 1 GLN A 79 GLY A 83 5 5 HELIX 2 2 THR A 119 THR A 123 5 5 HELIX 3 3 HIS A 139 ILE A 143 5 5 HELIX 4 4 PRO A 198 ILE A 202 5 5 HELIX 5 5 LYS A 224 PHE A 234 1 11 HELIX 6 6 GLU A 236 GLY A 249 1 14 HELIX 7 7 PRO A 280 LEU A 283 5 4 HELIX 8 8 SER A 290 SER A 300 1 11 HELIX 9 9 THR A 310 ASP A 312 5 3 HELIX 10 10 HIS A 313 GLY A 334 1 22 HELIX 11 11 GLY A 334 GLY A 357 1 24 HELIX 12 12 HIS A 360 LYS A 364 5 5 HELIX 13 13 ASP A 373 TYR A 378 1 6 HELIX 14 14 SER A 380 LEU A 397 1 18 HELIX 15 15 GLY A 399 SER A 415 1 17 HELIX 16 16 THR A 420 PHE A 432 1 13 HELIX 17 17 LYS A 435 ASN A 440 1 6 HELIX 18 18 ASP A 443 SER A 450 1 8 HELIX 19 19 THR A 465 THR A 477 1 13 HELIX 20 20 LYS A 479 PHE A 486 5 8 HELIX 21 21 ASN A 487 LYS A 492 5 6 HELIX 22 22 SER A 495 GLN A 508 1 14 HELIX 23 23 PRO A 513 ASN A 525 1 13 HELIX 24 24 PHE A 526 ILE A 529 5 4 HELIX 25 25 ASN A 531 SER A 545 1 15 HELIX 26 26 ASP A 549 GLN A 561 1 13 HELIX 27 27 ARG A 563 PHE A 577 1 15 HELIX 28 28 SER A 580 LYS A 592 1 13 HELIX 29 29 ALA A 593 MET A 595 5 3 HELIX 30 30 HIS A 596 LYS A 608 1 13
SHEET 1 A 8 GLN A 69 GLU A 70 0 SHEET 2 A 8 LEU A 59 ILE A 66 -1 N ILE A 66 O GLN A 69 SHEET 3 A 8 GLU A 99 THR A 108 -1 N GLU A 103 O VAL A 65 SHEET 4 A 8 THR A 33 SER A 44 -1 O LEU A 34 N THR A 108 SHEET 5 A 8 CYS A 16 ASP A 28 -1 O ARG A 17 N GLN A 43 SHEET 6 A 8 LEU A 154 PRO A 163 1 N THR A 155 O LYS A 19 SHEET 7 A 8 ARG A 186 ILE A 197 -1 N LYS A 187 O VAL A 162 SHEET 8 A 8 ILE A 173 PRO A 179 -1 N ILE A 173 O ILE A 192 SHEET 1 B 3 LEU A 49 LEU A 54 0 SHEET 2 B 3 MET A 86 LEU A 94 -1 N MET A 86 O LEU A 54 SHEET 3 B 3 TYR A 73 LEU A 75 -1 N ALA A 74 O GLU A 87 SHEET 1 C 4 LEU A 115 LEU A 118 0 SHEET 2 C 4 TYR A 130 SER A 133 -1 O TYR A 130 N LEU A 118 SHEET 3 C 4 LEU A 204 GLY A 207 -1 O LEU A 204 N SER A 133 SHEET 4 C 4 VAL A 167 MET A 170 -1 N VAL A 167 O GLY A 207 SHEET 1 D 5 LEU A 209 GLY A 215 0 SHEET 2 D 5 THR A 218 GLU A 223 -1 O THR A 218 N ILE A 214 SHEET 3 D 5 ASP A 257 VAL A 260 1 O LEU A 258 N TRP A 221 SHEET 4 D 5 LEU A 275 VAL A 278 1 O THR A 276 N LEU A 259 SHEET 5 D 5 GLY A 269 MET A 270 -1 O MET A 270 N PHE A 277 SHEET 1 E 2 VAL A 306 ASN A 308 0 SHEET 2 E 2 LYS A 417 ILE A 419 1 O LYS A 417 N THR A 307
LINK ZN ZN A 701 NE2 HIS A 295 1555 1555 1.96 LINK ZN ZN A 701 NE2 HIS A 299 1555 1555 2.05 LINK ZN ZN A 701 OE1 GLU A 318 1555 1555 1.93 LINK ZN ZN A 701 O2 BES A 901 1555 1555 2.09 LINK ZN ZN A 701 O3 BES A 901 1555 1555 2.51 LINK YB YB A 801 OD1 ASP A 481 1555 1555 2.21 LINK YB YB A 801 O HOH A1260 1555 1555 2.22 LINK YB YB A 801 OD2 ASP A 481 1555 1555 2.41 LINK YB YB A 803 O HOH A1409 1555 1555 2.87 LINK YB YB A 803 OE1 GLU A 107 1555 1555 2.66 LINK YB YB A 803 OE2 GLU A 107 1555 1555 2.22 LINK YB YB A 801 OD1 ASP A 422 1555 4557 2.41 LINK YB YB A 801 O HOH A1259 1555 4557 2.29 LINK YB YB A 801 OD2 ASP A 422 1555 4557 2.34 LINK YB YB A 801 O HOH A1290 1555 4557 2.30 LINK YB YB A 801 OD1 ASP A 426 1555 4557 2.49 LINK YB YB A 801 OD2 ASP A 426 1555 4557 2.25 LINK YB YB A 802 OE2 GLU A 127 1555 2565 2.39 LINK YB YB A 803 OE1 GLU A 127 1555 2565 2.84 LINK YB YB A 803 O HOH A1541 1555 2565 2.26 LINK YB YB A 803 OE2 GLU A 127 1555 2565 2.88 LINK CD GLU A 107 YB YB A 803 1555 1555 2.65 LINK CG ASP A 481 YB YB A 801 1555 1555 2.63
CISPEP 1 GLN A 136 ALA A 137 0 1.09 CISPEP 2 ALA A 510 PRO A 511 0 2.99
SITE 1 AC1 4 HIS A 295 HIS A 299 GLU A 318 BES A 901 SITE 1 AC2 6 ASP A 422 ASP A 426 ASP A 481 HOH A1259 SITE 2 AC2 6 HOH A1260 HOH A1290 SITE 1 AC3 2 GLU A 127 YB A 803 SITE 1 AC4 5 GLU A 107 GLU A 127 YB A 802 HOH A1409 SITE 2 AC4 5 HOH A1541 SITE 1 AC5 5 LYS A 425 ASP A 426 TYR A 429 ASP A 481 SITE 2 AC5 5 HOH A1260 SITE 1 AC6 17 GLN A 134 GLN A 136 TYR A 267 GLY A 268 SITE 2 AC6 17 GLY A 269 MET A 270 GLU A 271 HIS A 295 SITE 3 AC6 17 GLU A 296 HIS A 299 GLU A 318 TYR A 378 SITE 4 AC6 17 TYR A 383 ZN A 701 HOH A1178 HOH A1295 SITE 5 AC6 17 HOH A1347 SITE 1 AC7 6 GLY A 344 GLY A 347 GLU A 348 GLU A 501 SITE 2 AC7 6 ALA A 504 GLN A 508
CRYST1 67.600 133.500 83.400 90.00 90.00 90.00 P 21 21 2 4
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.014793 0.000000 0.000000 0.00000
SCALE2 0.000000 0.007491 0.000000 0.00000
SCALE3 0.000000 0.000000 0.011990 0.00000