10 20 30 40 50 60 70 80 1HP1 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER HYDROLASE 12-DEC-00 1HP1
TITLE 5'-NUCLEOTIDASE (OPEN FORM) COMPLEX WITH ATP
COMPND MOL_ID: 1; COMPND 2 MOLECULE: 5'-NUCLEOTIDASE; COMPND 3 CHAIN: A; COMPND 4 EC: 3.1.3.5, 3.6.1.45; COMPND 5 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: USHA; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: DS956
KEYWDS METALLOPHOSPHATASE, DINUCLEAR, METALLOENZYME, HYDROLASE, KEYWDS 2 DOMAIN MOVEMENT
EXPDTA X-RAY DIFFRACTION
AUTHOR T.KNOEFEL,N.STRAETER
REVDAT 3 24-FEB-09 1HP1 1 VERSN REVDAT 2 01-APR-03 1HP1 1 JRNL REVDAT 1 20-MAR-02 1HP1 0
JRNL AUTH T.KNOFEL,N.STRATER JRNL TITL MECHANISM OF HYDROLYSIS OF PHOSPHATE ESTERS BY THE JRNL TITL 2 DIMETAL CENTER OF 5'-NUCLEOTIDASE BASED ON CRYSTAL JRNL TITL 3 STRUCTURES. JRNL REF J.MOL.BIOL. V. 309 239 2001 JRNL REFN ISSN 0022-2836 JRNL PMID 11491293 JRNL DOI 10.1006/JMBI.2001.4656
REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH T.KNOEFEL,N.STRAETER REMARK 1 TITL E. COLI 5'-NUCLEOTIDASE UNDERGOES A HINGE-BENDING REMARK 1 TITL 2 DOMAIN ROTATION RESEMBLING A BALL-AND-SOCKET MOTION REMARK 1 REF J.MOL.BIOL. V. 309 255 2001 REMARK 1 REFN ISSN 0022-2836 REMARK 1 DOI 10.1006/JMBI.2001.4657 REMARK 1 REFERENCE 2 REMARK 1 AUTH T.KNOEFEL,N.STRAETER REMARK 1 TITL X-RAY STRUCTURE OF THE ESCHERICHIA COLI REMARK 1 TITL 2 PERIPLASMIC 5'-NUCLEOTIDASE CONTAINING A DIMETAL REMARK 1 TITL 3 CATALYTIC SITE REMARK 1 REF NAT.STRUCT.BIOL. V. 6 448 1999 REMARK 1 REFN ISSN 1072-8368 REMARK 1 DOI 10.1038/8253
REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.59 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 2807117.450 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 70916 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.176 REMARK 3 FREE R VALUE : 0.199 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2164 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.004 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.81 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.50 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 11251 REMARK 3 BIN R VALUE (WORKING SET) : 0.1810 REMARK 3 BIN FREE R VALUE : 0.2100 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 2.90 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 331 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.012 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4027 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 52 REMARK 3 SOLVENT ATOMS : 739 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 16.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.64000 REMARK 3 B22 (A**2) : -0.64000 REMARK 3 B33 (A**2) : 1.28000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.16 REMARK 3 ESD FROM SIGMAA (A) : -0.02 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.19 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.06 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.012 REMARK 3 BOND ANGLES (DEGREES) : 1.70 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 24.10 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.08 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.130 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 1.660 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 1.960 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 2.750 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.38 REMARK 3 BSOL : 50.48 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1HP1 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-DEC-00. REMARK 100 THE RCSB ID CODE IS RCSB012492.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-MAR-99 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : EMBL/DESY, HAMBURG REMARK 200 BEAMLINE : BW7B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8468 REMARK 200 MONOCHROMATOR : BENT SINGLE-CRYSTAL GERMANIUM REMARK 200 TRIANGULAR MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 71863 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : 0.04000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 21.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.76 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.2 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.14300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: 1USH REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.75 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.78 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: LITHIUM SULFATE, SODIUM ACETATE, REMARK 280 CESIUM CHLORIDE, PH 6.6, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 298K
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 90.90000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 41.85000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 41.85000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 45.45000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 41.85000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 41.85000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 136.35000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 41.85000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 41.85000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 45.45000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 41.85000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 41.85000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 136.35000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 90.90000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 332 N - CA - C ANGL. DEV. = 18.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 29 13.07 59.46 REMARK 500 TYR A 54 -150.10 45.58 REMARK 500 THR A 87 116.42 73.63 REMARK 500 GLN A 161 -129.45 63.48 REMARK 500 HIS A 252 -56.70 75.16 REMARK 500 GLN A 254 66.28 60.04 REMARK 500 HIS A 289 -99.76 67.13 REMARK 500 LYS A 322 53.30 8.41 REMARK 500 ARG A 332 18.56 87.79 REMARK 500 THR A 495 -165.59 -165.91 REMARK 500 REMARK 500 REMARK: NULL
REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 600 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 41 OD2 REMARK 620 2 HIS A 43 NE2 118.3 REMARK 620 3 GLN A 254 OE1 94.8 85.0 REMARK 620 4 ASP A 84 OD2 93.8 95.4 170.0 REMARK 620 5 CO3 A 602 O1 115.2 126.4 86.8 85.0 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 601 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 116 OD1 REMARK 620 2 HIS A 217 NE2 94.5 REMARK 620 3 CO3 A 602 O1 123.4 141.9 REMARK 620 4 CO3 A 602 O3 78.0 172.0 45.8 REMARK 620 5 HIS A 252 ND1 97.5 94.5 84.8 83.9 REMARK 620 6 ASP A 84 OD2 98.1 87.6 83.9 96.1 164.1 REMARK 620 N 1 2 3 4 5
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 600 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 601 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CO3 A 602 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 603 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 604 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 605 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ATP A 606
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1USH RELATED DB: PDB REMARK 900 5'-NUCLEOTIDASE (OPEN FORM), NATIVE REMARK 900 RELATED ID: 2USH RELATED DB: PDB REMARK 900 5'-NUCLEOTIDASE (OPEN FORM), NATIVE REMARK 900 RELATED ID: 1HO5 RELATED DB: PDB REMARK 900 5'-NUCLEOTIDASE (CLOSED FORM), COMPLEX WITH ADENOSINE AND REMARK 900 PHOSPHATE REMARK 900 RELATED ID: 1HPU RELATED DB: PDB REMARK 900 5'-NUCLEOTIDASE (CLOSED FORM), COMPLEX WITH AMPCP
DBREF 1HP1 A 26 541 UNP P07024 USHA_ECOLI 26 550
SEQADV 1HP1 A UNP P07024 VAL 323 DELETION SEQADV 1HP1 A UNP P07024 THR 324 DELETION SEQADV 1HP1 A UNP P07024 TRP 325 DELETION SEQADV 1HP1 A UNP P07024 GLU 326 DELETION SEQADV 1HP1 A UNP P07024 ASP 327 DELETION SEQADV 1HP1 A UNP P07024 GLY 328 DELETION SEQADV 1HP1 A UNP P07024 LYS 329 DELETION SEQADV 1HP1 A UNP P07024 SER 330 DELETION SEQADV 1HP1 A UNP P07024 GLU 331 DELETION
SEQRES 1 A 516 TYR GLU GLN ASP LYS THR TYR LYS ILE THR VAL LEU HIS SEQRES 2 A 516 THR ASN ASP HIS HIS GLY HIS PHE TRP ARG ASN GLU TYR SEQRES 3 A 516 GLY GLU TYR GLY LEU ALA ALA GLN LYS THR LEU VAL ASP SEQRES 4 A 516 GLY ILE ARG LYS GLU VAL ALA ALA GLU GLY GLY SER VAL SEQRES 5 A 516 LEU LEU LEU SER GLY GLY ASP ILE ASN THR GLY VAL PRO SEQRES 6 A 516 GLU SER ASP LEU GLN ASP ALA GLU PRO ASP PHE ARG GLY SEQRES 7 A 516 MET ASN LEU VAL GLY TYR ASP ALA MET ALA ILE GLY ASN SEQRES 8 A 516 HIS GLU PHE ASP ASN PRO LEU THR VAL LEU ARG GLN GLN SEQRES 9 A 516 GLU LYS TRP ALA LYS PHE PRO LEU LEU SER ALA ASN ILE SEQRES 10 A 516 TYR GLN LYS SER THR GLY GLU ARG LEU PHE LYS PRO TRP SEQRES 11 A 516 ALA LEU PHE LYS ARG GLN ASP LEU LYS ILE ALA VAL ILE SEQRES 12 A 516 GLY LEU THR THR ASP ASP THR ALA LYS ILE GLY ASN PRO SEQRES 13 A 516 GLU TYR PHE THR ASP ILE GLU PHE ARG LYS PRO ALA ASP SEQRES 14 A 516 GLU ALA LYS LEU VAL ILE GLN GLU LEU GLN GLN THR GLU SEQRES 15 A 516 LYS PRO ASP ILE ILE ILE ALA ALA THR HIS MET GLY HIS SEQRES 16 A 516 TYR ASP ASN GLY GLU HIS GLY SER ASN ALA PRO GLY ASP SEQRES 17 A 516 VAL GLU MET ALA ARG ALA LEU PRO ALA GLY SER LEU ALA SEQRES 18 A 516 MET ILE VAL GLY GLY HIS SER GLN ASP PRO VAL CYS MET SEQRES 19 A 516 ALA ALA GLU ASN LYS LYS GLN VAL ASP TYR VAL PRO GLY SEQRES 20 A 516 THR PRO CYS LYS PRO ASP GLN GLN ASN GLY ILE TRP ILE SEQRES 21 A 516 VAL GLN ALA HIS GLU TRP GLY LYS TYR VAL GLY ARG ALA SEQRES 22 A 516 ASP PHE GLU PHE ARG ASN GLY GLU MET LYS MET VAL ASN SEQRES 23 A 516 TYR GLN LEU ILE PRO VAL ASN LEU LYS LYS LYS ARG VAL SEQRES 24 A 516 LEU TYR THR PRO GLU ILE ALA GLU ASN GLN GLN MET ILE SEQRES 25 A 516 SER LEU LEU SER PRO PHE GLN ASN LYS GLY LYS ALA GLN SEQRES 26 A 516 LEU GLU VAL LYS ILE GLY GLU THR ASN GLY ARG LEU GLU SEQRES 27 A 516 GLY ASP ARG ASP LYS VAL ARG PHE VAL GLN THR ASN MET SEQRES 28 A 516 GLY ARG LEU ILE LEU ALA ALA GLN MET ASP ARG THR GLY SEQRES 29 A 516 ALA ASP PHE ALA VAL MET SER GLY GLY GLY ILE ARG ASP SEQRES 30 A 516 SER ILE GLU ALA GLY ASP ILE SER TYR LYS ASN VAL LEU SEQRES 31 A 516 LYS VAL GLN PRO PHE GLY ASN VAL VAL VAL TYR ALA ASP SEQRES 32 A 516 MET THR GLY LYS GLU VAL ILE ASP TYR LEU THR ALA VAL SEQRES 33 A 516 ALA GLN MET LYS PRO ASP SER GLY ALA TYR PRO GLN PHE SEQRES 34 A 516 ALA ASN VAL SER PHE VAL ALA LYS ASP GLY LYS LEU ASN SEQRES 35 A 516 ASP LEU LYS ILE LYS GLY GLU PRO VAL ASP PRO ALA LYS SEQRES 36 A 516 THR TYR ARG MET ALA THR LEU ASN PHE ASN ALA THR GLY SEQRES 37 A 516 GLY ASP GLY TYR PRO ARG LEU ASP ASN LYS PRO GLY TYR SEQRES 38 A 516 VAL ASN THR GLY PHE ILE ASP ALA GLU VAL LEU LYS ALA SEQRES 39 A 516 TYR ILE GLN LYS SER SER PRO LEU ASP VAL SER VAL TYR SEQRES 40 A 516 GLU PRO LYS GLY GLU VAL SER TRP GLN
HET ZN A 600 1 HET ZN A 601 1 HET CO3 A 602 4 HET SO4 A 603 5 HET SO4 A 604 5 HET SO4 A 605 5 HET ATP A 606 31
HETNAM ZN ZINC ION HETNAM CO3 CARBONATE ION HETNAM SO4 SULFATE ION HETNAM ATP ADENOSINE-5'-TRIPHOSPHATE
FORMUL 2 ZN 2(ZN 2+) FORMUL 4 CO3 C O3 2- FORMUL 5 SO4 3(O4 S 2-) FORMUL 8 ATP C10 H16 N5 O13 P3 FORMUL 9 HOH *739(H2 O)
HELIX 1 1 GLY A 55 GLY A 74 1 20 HELIX 2 2 VAL A 89 LEU A 94 1 6 HELIX 3 3 ALA A 97 GLY A 108 1 12 HELIX 4 4 GLY A 115 ASP A 120 5 6 HELIX 5 5 PRO A 122 ALA A 133 1 12 HELIX 6 6 LYS A 191 GLU A 207 1 17 HELIX 7 7 TYR A 221 GLU A 225 5 5 HELIX 8 8 GLY A 232 LEU A 240 1 9 HELIX 9 9 ASN A 342 LEU A 360 1 19 HELIX 10 10 ASP A 374 ARG A 379 1 6 HELIX 11 11 THR A 383 GLY A 398 1 16 HELIX 12 12 GLY A 407 ILE A 409 5 3 HELIX 13 13 TYR A 420 GLN A 427 1 8 HELIX 14 14 GLY A 440 ALA A 451 1 12 HELIX 15 15 ASN A 497 THR A 501 1 5 HELIX 16 16 GLY A 502 TYR A 506 5 5 HELIX 17 17 ASP A 522 SER A 534 1 13 HELIX 18 18 ASP A 537 GLU A 542 5 6
SHEET 1 A 6 LEU A 137 LEU A 138 0 SHEET 2 A 6 ALA A 111 ALA A 113 1 O MET A 112 N LEU A 138 SHEET 3 A 6 SER A 76 SER A 81 1 O LEU A 79 N ALA A 111 SHEET 4 A 6 TYR A 32 THR A 39 1 O LYS A 33 N SER A 76 SHEET 5 A 6 TYR A 294 ARG A 303 -1 N GLY A 296 O HIS A 38 SHEET 6 A 6 GLU A 306 PRO A 316 -1 N GLU A 306 O ARG A 303 SHEET 1 B 2 ILE A 142 GLN A 144 0 SHEET 2 B 2 ILE A 187 PHE A 189 -1 O GLU A 188 N TYR A 143 SHEET 1 C 6 TRP A 155 ARG A 160 0 SHEET 2 C 6 LEU A 163 THR A 171 -1 N LEU A 163 O ARG A 160 SHEET 3 C 6 ILE A 211 HIS A 217 1 O ILE A 211 N ALA A 166 SHEET 4 C 6 MET A 247 VAL A 249 1 O MET A 247 N ALA A 214 SHEET 5 C 6 ILE A 283 VAL A 286 1 O TRP A 284 N ILE A 248 SHEET 6 C 6 ASP A 278 GLN A 280 -1 O ASP A 278 N ILE A 285 SHEET 1 D 2 MET A 259 ALA A 261 0 SHEET 2 D 2 LYS A 264 LYS A 265 -1 O LYS A 264 N ALA A 260 SHEET 1 E 2 LYS A 320 LYS A 321 0 SHEET 2 E 2 VAL A 333 LEU A 334 -1 O VAL A 333 N LYS A 321 SHEET 1 F 2 LYS A 363 THR A 367 0 SHEET 2 F 2 GLY A 416 SER A 419 -1 O GLY A 416 N THR A 367 SHEET 1 G 5 PRO A 461 ALA A 464 0 SHEET 2 G 5 PHE A 401 SER A 405 -1 O ALA A 402 N ALA A 464 SHEET 3 G 5 THR A 490 LEU A 496 1 O ARG A 492 N PHE A 401 SHEET 4 G 5 VAL A 432 THR A 439 -1 N VAL A 434 O THR A 495 SHEET 5 G 5 TYR A 515 ILE A 521 -1 N VAL A 516 O TYR A 435 SHEET 1 H 4 GLU A 483 PRO A 484 0 SHEET 2 H 4 LYS A 474 ILE A 480 -1 N ILE A 480 O GLU A 483 SHEET 3 H 4 VAL A 466 LYS A 471 -1 O SER A 467 N LYS A 479 SHEET 4 H 4 VAL A 547 GLN A 550 1 O SER A 548 N ALA A 470
SSBOND 1 CYS A 258 CYS A 275 1555 1555 2.03
LINK ZN ZN A 600 OD2 ASP A 41 1555 1555 2.07 LINK ZN ZN A 600 NE2 HIS A 43 1555 1555 2.09 LINK ZN ZN A 600 OE1 GLN A 254 1555 1555 2.29 LINK ZN ZN A 600 OD2 ASP A 84 1555 1555 2.29 LINK ZN ZN A 600 O1 CO3 A 602 1555 1555 2.60 LINK ZN ZN A 601 OD1 ASN A 116 1555 1555 2.09 LINK ZN ZN A 601 NE2 HIS A 217 1555 1555 2.07 LINK ZN ZN A 601 O1 CO3 A 602 1555 1555 2.69 LINK ZN ZN A 601 O3 CO3 A 602 1555 1555 2.76 LINK ZN ZN A 601 ND1 HIS A 252 1555 1555 2.32 LINK ZN ZN A 601 OD2 ASP A 84 1555 1555 2.24
CISPEP 1 SER A 534 PRO A 535 0 0.15
SITE 1 AC1 6 ASP A 41 HIS A 43 ASP A 84 GLN A 254 SITE 2 AC1 6 ZN A 601 CO3 A 602 SITE 1 AC2 6 ASP A 84 ASN A 116 HIS A 217 HIS A 252 SITE 2 AC2 6 ZN A 600 CO3 A 602 SITE 1 AC3 10 ASP A 84 ASN A 116 HIS A 117 HIS A 252 SITE 2 AC3 10 GLN A 254 THR A 518 GLY A 519 ZN A 600 SITE 3 AC3 10 ZN A 601 HOH A 949 SITE 1 AC4 6 TRP A 47 ARG A 48 HOH A1196 HOH A1223 SITE 2 AC4 6 HOH A1224 HOH A1381 SITE 1 AC5 5 ASN A 342 GLN A 343 HOH A 806 HOH A 854 SITE 2 AC5 5 HOH A1166 SITE 1 AC6 8 LYS A 68 GLY A 148 ARG A 190 HOH A 973 SITE 2 AC6 8 HOH A1056 HOH A1089 HOH A1264 HOH A1317 SITE 1 AC7 11 ARG A 375 ARG A 379 GLY A 407 ARG A 410 SITE 2 AC7 11 PHE A 429 ASN A 431 GLY A 458 PHE A 498 SITE 3 AC7 11 ASP A 504 HOH A1133 HOH A1363
CRYST1 83.700 83.700 181.800 90.00 90.00 90.00 P 41 21 2 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.011947 0.000000 0.000000 0.00000
SCALE2 0.000000 0.011947 0.000000 0.00000
SCALE3 0.000000 0.000000 0.005501 0.00000