10 20 30 40 50 60 70 80 1HGY - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER HYDROLASE (O-GLYCOSYL) 15-DEC-00 1HGY
TITLE CEL6A D221A MUTANT
COMPND MOL_ID: 1; COMPND 2 MOLECULE: CELLOBIOHYDROLASE CEL6A (FORMERLY CALLED CBH II); COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: CATALYTIC DOMAIN, RESIDUES 83-447; COMPND 5 SYNONYM: CEL6A (D221A); COMPND 6 EC: 3.2.1.91; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TRICHODERMA REESEI; SOURCE 3 ORGANISM_TAXID: 51453; SOURCE 4 GENE: CBH2 (D221A); SOURCE 5 EXPRESSION_SYSTEM: TRICHODERMA REESEI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 51453; SOURCE 7 EXPRESSION_SYSTEM_GENE: CBH2 (D221A)
KEYWDS HYDROLASE (O-GLYCOSYL), GLYCOSIDASE, GLYCOPROTEIN
EXPDTA X-RAY DIFFRACTION
AUTHOR J.-Y.ZOU,G.J.KLEYWEGT,T.A.JONES
REVDAT 5 12-JUL-17 1HGY 1 REVDAT 4 24-FEB-09 1HGY 1 VERSN REVDAT 3 06-JUN-06 1HGY 1 JRNL REVDAT 2 29-AUG-02 1HGY 1 JRNL REVDAT 1 15-JAN-02 1HGY 0
JRNL AUTH A.KOIVULA,L.RUOHONEN,G.WOHLFAHRT,T.REINIKAINEN,T.T.TEERI, JRNL AUTH 2 K.PIENS,M.CLAEYSSENS,M.WEBER,A.VASELLA,D.BECKER,M.L.SINNOTT, JRNL AUTH 3 J.-Y.ZOU,G.J.KLEYWEGT,M.SZARDENINGS,J.STAHLBERG,T.A.JONES JRNL TITL THE ACTIVE SITE OF CELLOBIOHYDROLASE CEL6A FROM TRICHODERMA JRNL TITL 2 REESEI: THE ROLES OF ASPARTIC ACIDS D221 AND D175 JRNL REF J.AM.CHEM.SOC. V. 124 10015 2002 JRNL REFN ISSN 0002-7863 JRNL PMID 12188666 JRNL DOI 10.1021/JA012659Q
REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH J.ROUVINEN,T.BERGFORS,T.TEERI,J.K.KNOWLES,T.A.JONES REMARK 1 TITL THREE-DIMENSIONAL STRUCTURE OF CELLOBIOHYDROLASE II FROM REMARK 1 TITL 2 TRICHODERMA REESEI REMARK 1 REF SCIENCE V. 249 380 1990 REMARK 1 REFN ISSN 0036-8075 REMARK 1 PMID 2377893 REMARK 1 DOI 10.1126/SCIENCE.2377893
REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.90 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 88331.740 REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 81.4 REMARK 3 NUMBER OF REFLECTIONS : 26776 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.258 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1893 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.006 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.34 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 58.60 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 3008 REMARK 3 BIN R VALUE (WORKING SET) : 0.2600 REMARK 3 BIN FREE R VALUE : 0.3180 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 7.50 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 243 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.020 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5488 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 234 REMARK 3 SOLVENT ATOMS : 185 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 17.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.65000 REMARK 3 B22 (A**2) : 0.08000 REMARK 3 B33 (A**2) : -0.73000 REMARK 3 B12 (A**2) : 0.22000 REMARK 3 B13 (A**2) : -5.10000 REMARK 3 B23 (A**2) : 0.48000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.26 REMARK 3 ESD FROM SIGMAA (A) : 0.29 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.35 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.35 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.006 REMARK 3 BOND ANGLES (DEGREES) : 1.300 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 22.80 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.820 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.290 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.090 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 1.800 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 2.590 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.32 REMARK 3 BSOL : 40.00 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : PAR.GLYCO REMARK 3 PARAMETER FILE 4 : ION.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : TOP.GLYCO REMARK 3 TOPOLOGY FILE 4 : ION.TOP REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: BULK SOLVENT MODEL USED THE CATALYTIC REMARK 3 CORE STARTS AT RESIDUE 83.
REMARK 4 REMARK 4 1HGY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 15-DEC-00. REMARK 100 THE DEPOSITION ID IS D_1290005692.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 293.0 REMARK 200 PH : 6.00 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : AREA DETECTOR REMARK 200 DETECTOR MANUFACTURER : SDMS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MADNESS REMARK 200 DATA SCALING SOFTWARE : MADNESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31767 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.130 REMARK 200 RESOLUTION RANGE LOW (A) : 8.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 80.3 REMARK 200 DATA REDUNDANCY : 2.300 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 8.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.13 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.29 REMARK 200 COMPLETENESS FOR SHELL (%) : 48.1 REMARK 200 DATA REDUNDANCY IN SHELL : 1.30 REMARK 200 R MERGE FOR SHELL (I) : 0.15800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: WILDTYPE CEL6A REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.63 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.14 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG6000, 10MM MES BUFFER., PH 6.00
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 400 REMARK 400 COMPOUND REMARK 400 CHAIN A, B ENGINEERED MUTATION ASP 221 ALA. REMARK 400 HYDROLYSIS OF 1,4-BETA-D-GLUCOSIDIC LINKAGES REMARK 400 IN CELLULOSE AND CELLOTETRAOSE,
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 83 REMARK 465 GLY A 84 REMARK 465 SER B 83 REMARK 465 GLY B 84
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 91 106.07 -57.43 REMARK 500 LEU A 111 -23.30 -147.59 REMARK 500 PRO A 114 -7.92 -54.90 REMARK 500 LEU A 136 61.96 -100.82 REMARK 500 ASP A 140 11.74 -66.94 REMARK 500 ASN A 158 57.49 -108.87 REMARK 500 ASP A 170 28.06 -154.98 REMARK 500 ASP A 189 53.19 -93.95 REMARK 500 GLU A 219 76.83 43.22 REMARK 500 SER A 222 -68.42 -133.48 REMARK 500 TRP A 269 -67.54 -92.11 REMARK 500 ASN A 369 51.41 34.70 REMARK 500 CYS A 400 155.26 -44.18 REMARK 500 LEU B 136 66.23 -103.46 REMARK 500 ASP B 140 2.16 -67.84 REMARK 500 TYR B 169 71.52 -155.14 REMARK 500 ASP B 170 27.84 -145.86 REMARK 500 LEU B 179 -86.22 -53.20 REMARK 500 ASP B 189 59.75 -115.55 REMARK 500 TYR B 209 54.41 -108.97 REMARK 500 GLU B 219 83.10 48.29 REMARK 500 SER B 222 -79.25 -127.57 REMARK 500 ASN B 305 -168.38 -110.30 REMARK 500 ASN B 369 51.57 33.99 REMARK 500 REMARK 500 REMARK: NULL
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAG A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAG A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MAN A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MAN A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MAN A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MAN A 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MAN A 507 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BMA A 508 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MAN A 509 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GLC A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GLC A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAG B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAG B 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MAN B 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MAN B 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MAN B 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MAN B 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MAN B 507 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MAN B 508 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MAN B 509
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1CB2 RELATED DB: PDB REMARK 900 CELLOBIOHYDROLASE II, CATALYTIC DOMAIN, MUTANT Y169F REMARK 900 RELATED ID: 1HGW RELATED DB: PDB REMARK 900 CEL6A D175A MUTANT REMARK 900 RELATED ID: 1QJW RELATED DB: PDB REMARK 900 CEL6A (Y169F) WITH A NON-HYDROLYSABLE CELLOTETRAOSE REMARK 900 RELATED ID: 1QK0 RELATED DB: PDB REMARK 900 CEL6A (Y169F) WITH A NON-HYDROLYSABLE CELLOTETRAOSE REMARK 900 RELATED ID: 1QK2 RELATED DB: PDB REMARK 900 WILD TYPE CEL6A WITH A NON-HYDROLYSABLE CELLOTETRAOSE
DBREF 1HGY A 83 447 UNP P07987 GUX2_TRIRE 107 471 DBREF 1HGY B 83 447 UNP P07987 GUX2_TRIRE 107 471
SEQADV 1HGY ALA A 221 UNP P07987 ASP 245 ENGINEERED MUTATION SEQADV 1HGY ALA B 221 UNP P07987 ASP 245 ENGINEERED MUTATION
SEQRES 1 A 365 SER GLY THR ALA THR TYR SER GLY ASN PRO PHE VAL GLY SEQRES 2 A 365 VAL THR PRO TRP ALA ASN ALA TYR TYR ALA SER GLU VAL SEQRES 3 A 365 SER SER LEU ALA ILE PRO SER LEU THR GLY ALA MET ALA SEQRES 4 A 365 THR ALA ALA ALA ALA VAL ALA LYS VAL PRO SER PHE MET SEQRES 5 A 365 TRP LEU ASP THR LEU ASP LYS THR PRO LEU MET GLU GLN SEQRES 6 A 365 THR LEU ALA ASP ILE ARG THR ALA ASN LYS ASN GLY GLY SEQRES 7 A 365 ASN TYR ALA GLY GLN PHE VAL VAL TYR ASP LEU PRO ASP SEQRES 8 A 365 ARG ASP CYS ALA ALA LEU ALA SER ASN GLY GLU TYR SER SEQRES 9 A 365 ILE ALA ASP GLY GLY VAL ALA LYS TYR LYS ASN TYR ILE SEQRES 10 A 365 ASP THR ILE ARG GLN ILE VAL VAL GLU TYR SER ASP ILE SEQRES 11 A 365 ARG THR LEU LEU VAL ILE GLU PRO ALA SER LEU ALA ASN SEQRES 12 A 365 LEU VAL THR ASN LEU GLY THR PRO LYS CYS ALA ASN ALA SEQRES 13 A 365 GLN SER ALA TYR LEU GLU CYS ILE ASN TYR ALA VAL THR SEQRES 14 A 365 GLN LEU ASN LEU PRO ASN VAL ALA MET TYR LEU ASP ALA SEQRES 15 A 365 GLY HIS ALA GLY TRP LEU GLY TRP PRO ALA ASN GLN ASP SEQRES 16 A 365 PRO ALA ALA GLN LEU PHE ALA ASN VAL TYR LYS ASN ALA SEQRES 17 A 365 SER SER PRO ARG ALA LEU ARG GLY LEU ALA THR ASN VAL SEQRES 18 A 365 ALA ASN TYR ASN GLY TRP ASN ILE THR SER PRO PRO SER SEQRES 19 A 365 TYR THR GLN GLY ASN ALA VAL TYR ASN GLU LYS LEU TYR SEQRES 20 A 365 ILE HIS ALA ILE GLY PRO LEU LEU ALA ASN HIS GLY TRP SEQRES 21 A 365 SER ASN ALA PHE PHE ILE THR ASP GLN GLY ARG SER GLY SEQRES 22 A 365 LYS GLN PRO THR GLY GLN GLN GLN TRP GLY ASP TRP CYS SEQRES 23 A 365 ASN VAL ILE GLY THR GLY PHE GLY ILE ARG PRO SER ALA SEQRES 24 A 365 ASN THR GLY ASP SER LEU LEU ASP SER PHE VAL TRP VAL SEQRES 25 A 365 LYS PRO GLY GLY GLU CYS ASP GLY THR SER ASP SER SER SEQRES 26 A 365 ALA PRO ARG PHE ASP SER HIS CYS ALA LEU PRO ASP ALA SEQRES 27 A 365 LEU GLN PRO ALA PRO GLN ALA GLY ALA TRP PHE GLN ALA SEQRES 28 A 365 TYR PHE VAL GLN LEU LEU THR ASN ALA ASN PRO SER PHE SEQRES 29 A 365 LEU SEQRES 1 B 365 SER GLY THR ALA THR TYR SER GLY ASN PRO PHE VAL GLY SEQRES 2 B 365 VAL THR PRO TRP ALA ASN ALA TYR TYR ALA SER GLU VAL SEQRES 3 B 365 SER SER LEU ALA ILE PRO SER LEU THR GLY ALA MET ALA SEQRES 4 B 365 THR ALA ALA ALA ALA VAL ALA LYS VAL PRO SER PHE MET SEQRES 5 B 365 TRP LEU ASP THR LEU ASP LYS THR PRO LEU MET GLU GLN SEQRES 6 B 365 THR LEU ALA ASP ILE ARG THR ALA ASN LYS ASN GLY GLY SEQRES 7 B 365 ASN TYR ALA GLY GLN PHE VAL VAL TYR ASP LEU PRO ASP SEQRES 8 B 365 ARG ASP CYS ALA ALA LEU ALA SER ASN GLY GLU TYR SER SEQRES 9 B 365 ILE ALA ASP GLY GLY VAL ALA LYS TYR LYS ASN TYR ILE SEQRES 10 B 365 ASP THR ILE ARG GLN ILE VAL VAL GLU TYR SER ASP ILE SEQRES 11 B 365 ARG THR LEU LEU VAL ILE GLU PRO ALA SER LEU ALA ASN SEQRES 12 B 365 LEU VAL THR ASN LEU GLY THR PRO LYS CYS ALA ASN ALA SEQRES 13 B 365 GLN SER ALA TYR LEU GLU CYS ILE ASN TYR ALA VAL THR SEQRES 14 B 365 GLN LEU ASN LEU PRO ASN VAL ALA MET TYR LEU ASP ALA SEQRES 15 B 365 GLY HIS ALA GLY TRP LEU GLY TRP PRO ALA ASN GLN ASP SEQRES 16 B 365 PRO ALA ALA GLN LEU PHE ALA ASN VAL TYR LYS ASN ALA SEQRES 17 B 365 SER SER PRO ARG ALA LEU ARG GLY LEU ALA THR ASN VAL SEQRES 18 B 365 ALA ASN TYR ASN GLY TRP ASN ILE THR SER PRO PRO SER SEQRES 19 B 365 TYR THR GLN GLY ASN ALA VAL TYR ASN GLU LYS LEU TYR SEQRES 20 B 365 ILE HIS ALA ILE GLY PRO LEU LEU ALA ASN HIS GLY TRP SEQRES 21 B 365 SER ASN ALA PHE PHE ILE THR ASP GLN GLY ARG SER GLY SEQRES 22 B 365 LYS GLN PRO THR GLY GLN GLN GLN TRP GLY ASP TRP CYS SEQRES 23 B 365 ASN VAL ILE GLY THR GLY PHE GLY ILE ARG PRO SER ALA SEQRES 24 B 365 ASN THR GLY ASP SER LEU LEU ASP SER PHE VAL TRP VAL SEQRES 25 B 365 LYS PRO GLY GLY GLU CYS ASP GLY THR SER ASP SER SER SEQRES 26 B 365 ALA PRO ARG PHE ASP SER HIS CYS ALA LEU PRO ASP ALA SEQRES 27 B 365 LEU GLN PRO ALA PRO GLN ALA GLY ALA TRP PHE GLN ALA SEQRES 28 B 365 TYR PHE VAL GLN LEU LEU THR ASN ALA ASN PRO SER PHE SEQRES 29 B 365 LEU
MODRES 1HGY THR A 87 THR GLYCOSYLATION SITE MODRES 1HGY THR A 97 THR GLYCOSYLATION SITE MODRES 1HGY SER A 106 SER GLYCOSYLATION SITE MODRES 1HGY SER A 109 SER GLYCOSYLATION SITE MODRES 1HGY SER A 110 SER GLYCOSYLATION SITE MODRES 1HGY SER A 115 SER GLYCOSYLATION SITE MODRES 1HGY THR A 122 THR GLYCOSYLATION SITE MODRES 1HGY ASN A 289 ASN GLYCOSYLATION SITE MODRES 1HGY ASN A 310 ASN GLYCOSYLATION SITE MODRES 1HGY THR B 87 THR GLYCOSYLATION SITE MODRES 1HGY THR B 97 THR GLYCOSYLATION SITE MODRES 1HGY SER B 106 SER GLYCOSYLATION SITE MODRES 1HGY SER B 109 SER GLYCOSYLATION SITE MODRES 1HGY SER B 110 SER GLYCOSYLATION SITE MODRES 1HGY SER B 115 SER GLYCOSYLATION SITE MODRES 1HGY THR B 122 THR GLYCOSYLATION SITE MODRES 1HGY ASN B 289 ASN GLYCOSYLATION SITE MODRES 1HGY ASN B 310 ASN GLYCOSYLATION SITE
HET NAG A 501 14 HET NAG A 502 14 HET MAN A 503 11 HET MAN A 504 11 HET MAN A 505 11 HET MAN A 506 11 HET MAN A 507 11 HET BMA A 508 11 HET MAN A 509 11 HET GLC A 601 12 HET GLC A 602 12 HET NAG B 501 14 HET NAG B 502 14 HET MAN B 503 11 HET MAN B 504 11 HET MAN B 505 11 HET MAN B 506 11 HET MAN B 507 11 HET MAN B 508 11 HET MAN B 509 11
HETNAM NAG N-ACETYL-D-GLUCOSAMINE HETNAM MAN ALPHA-D-MANNOSE HETNAM BMA BETA-D-MANNOSE HETNAM GLC ALPHA-D-GLUCOSE
FORMUL 3 NAG 4(C8 H15 N O6) FORMUL 5 MAN 13(C6 H12 O6) FORMUL 10 BMA C6 H12 O6 FORMUL 12 GLC 2(C6 H12 O6) FORMUL 23 HOH *185(H2 O)
HELIX 1 1 ASN A 101 SER A 110 1 10 HELIX 2 2 ALA A 112 LEU A 116 5 5 HELIX 3 3 GLY A 118 ALA A 128 1 11 HELIX 4 4 THR A 138 ASP A 140 5 3 HELIX 5 5 LYS A 141 ASN A 158 1 18 HELIX 6 6 GLY A 190 TYR A 209 1 20 HELIX 7 7 SER A 222 ASN A 229 1 8 HELIX 8 8 THR A 232 ASN A 237 1 6 HELIX 9 9 ALA A 238 LEU A 253 1 16 HELIX 10 10 HIS A 266 GLY A 271 1 6 HELIX 11 11 TRP A 272 ALA A 290 1 19 HELIX 12 12 PRO A 315 GLN A 319 5 5 HELIX 13 13 ASN A 325 HIS A 340 1 16 HELIX 14 14 ASP A 412 LEU A 417 5 6 HELIX 15 15 PHE A 431 ASN A 441 1 11 HELIX 16 16 ASN B 101 ALA B 112 1 12 HELIX 17 17 ILE B 113 LEU B 116 5 4 HELIX 18 18 GLY B 118 ALA B 128 1 11 HELIX 19 19 THR B 138 ASP B 140 5 3 HELIX 20 20 LYS B 141 ASN B 158 1 18 HELIX 21 21 SER B 186 ASP B 189 5 4 HELIX 22 22 GLY B 190 TYR B 209 1 20 HELIX 23 23 ALA B 224 ASN B 229 1 6 HELIX 24 24 THR B 232 LEU B 253 1 22 HELIX 25 25 TRP B 272 ALA B 290 1 19 HELIX 26 26 PRO B 315 GLN B 319 5 5 HELIX 27 27 ASN B 325 HIS B 340 1 16 HELIX 28 28 ASP B 412 LEU B 417 5 6 HELIX 29 29 PHE B 431 ASN B 441 1 11
SHEET 1 AA 3 THR A 97 PRO A 98 0 SHEET 2 AA 3 TYR A 162 VAL A 168 1 N ALA A 163 O THR A 97 SHEET 3 AA 3 MET A 134 LEU A 136 1 O MET A 134 N VAL A 167 SHEET 1 AB 7 THR A 97 PRO A 98 0 SHEET 2 AB 7 TYR A 162 VAL A 168 1 N ALA A 163 O THR A 97 SHEET 3 AB 7 THR A 214 ILE A 218 1 O LEU A 215 N PHE A 166 SHEET 4 AB 7 VAL A 258 ASP A 263 1 O ALA A 259 N LEU A 216 SHEET 5 AB 7 LEU A 296 THR A 301 1 O GLY A 298 N LEU A 262 SHEET 6 AB 7 PHE A 346 ASP A 350 1 O PHE A 346 N LEU A 299 SHEET 7 AB 7 LEU A 388 VAL A 392 1 N ASP A 389 O PHE A 347 SHEET 1 BA 3 THR B 97 PRO B 98 0 SHEET 2 BA 3 TYR B 162 VAL B 168 1 N ALA B 163 O THR B 97 SHEET 3 BA 3 MET B 134 LEU B 136 1 O MET B 134 N VAL B 167 SHEET 1 BB 7 THR B 97 PRO B 98 0 SHEET 2 BB 7 TYR B 162 VAL B 168 1 N ALA B 163 O THR B 97 SHEET 3 BB 7 ARG B 213 ILE B 218 1 O ARG B 213 N GLY B 164 SHEET 4 BB 7 VAL B 258 ASP B 263 1 O ALA B 259 N LEU B 216 SHEET 5 BB 7 LEU B 296 THR B 301 1 N ARG B 297 O MET B 260 SHEET 6 BB 7 PHE B 346 ASP B 350 1 O PHE B 346 N LEU B 299 SHEET 7 BB 7 LEU B 388 VAL B 392 1 N ASP B 389 O PHE B 347
SSBOND 1 CYS A 176 CYS A 235 1555 1555 2.03 SSBOND 2 CYS A 368 CYS A 415 1555 1555 2.02 SSBOND 3 CYS B 176 CYS B 235 1555 1555 2.03 SSBOND 4 CYS B 368 CYS B 415 1555 1555 2.02
LINK OG1 THR A 87 C1 MAN A 503 1555 1555 1.44 LINK OG1 THR A 97 C1 MAN A 504 1555 1555 1.43 LINK OG SER A 106 C1 MAN A 505 1555 1555 1.43 LINK OG SER A 109 C1 MAN A 506 1555 1555 1.43 LINK OG SER A 110 C1 MAN A 507 1555 1555 1.42 LINK OG SER A 115 C1 BMA A 508 1555 1555 1.43 LINK OG1 THR A 122 C1 MAN A 509 1555 1555 1.43 LINK ND2 ASN A 289 C1 NAG A 501 1555 1555 1.44 LINK ND2 ASN A 310 C1 NAG A 502 1555 1555 1.45 LINK OG1 THR B 87 C1 MAN B 503 1555 1555 1.44 LINK OG1 THR B 97 C1 MAN B 504 1555 1555 1.44 LINK OG SER B 106 C1 MAN B 505 1555 1555 1.43 LINK OG SER B 109 C1 MAN B 506 1555 1555 1.43 LINK OG SER B 110 C1 MAN B 507 1555 1555 1.43 LINK OG SER B 115 C1 MAN B 508 1555 1555 1.43 LINK OG1 THR B 122 C1 MAN B 509 1555 1555 1.44 LINK ND2 ASN B 289 C1 NAG B 501 1555 1555 1.45 LINK ND2 ASN B 310 C1 NAG B 502 1555 1555 1.46
CISPEP 1 GLN A 357 PRO A 358 0 -0.09 CISPEP 2 GLN A 422 PRO A 423 0 -0.21 CISPEP 3 ASN A 443 PRO A 444 0 0.32 CISPEP 4 GLN B 357 PRO B 358 0 -0.17 CISPEP 5 GLN B 422 PRO B 423 0 -0.14 CISPEP 6 ASN B 443 PRO B 444 0 0.16
SITE 1 AC1 4 LEU A 243 GLU A 244 ASN A 247 ASN A 289 SITE 1 AC2 7 TRP A 309 ASN A 310 THR A 383 PHE A 391 SITE 2 AC2 7 HOH A2087 GLN B 204 SER B 406 SITE 1 AC3 3 THR A 87 GLY A 372 ASN A 441 SITE 1 AC4 3 THR A 97 ASN A 161 MAN B 506 SITE 1 AC5 5 TYR A 103 SER A 106 GLU A 107 LEU A 111 SITE 2 AC5 5 MAN A 507 SITE 1 AC6 4 ALA A 105 SER A 109 ALA A 125 ASN A 339 SITE 1 AC7 5 SER A 106 SER A 110 GLN A 281 HIS A 340 SITE 2 AC7 5 MAN A 505 SITE 1 AC8 1 SER A 115 SITE 1 AC9 5 GLY A 118 THR A 122 ALA B 150 THR B 154 SITE 2 AC9 5 LYS B 157 SITE 1 BC1 7 ASP A 175 ALA A 178 HIS A 266 ASN A 305 SITE 2 BC1 7 HOH A2017 HOH A2090 HOH A2091 SITE 1 BC2 9 TRP A 135 ASP A 137 TYR A 169 SER A 181 SITE 2 BC2 9 LYS A 395 PRO A 396 GLU A 399 HOH A2091 SITE 3 BC2 9 HOH A2092 SITE 1 BC3 4 LEU B 243 ASN B 247 ASN B 289 HOH B2089 SITE 1 BC4 7 ASP A 405 SER A 406 TRP B 309 ASN B 310 SITE 2 BC4 7 THR B 312 HOH B2055 HOH B2091 SITE 1 BC5 5 THR B 87 LYS B 356 GLY B 372 ASN B 441 SITE 2 BC5 5 HOH B2092 SITE 1 BC6 3 THR B 97 GLY B 160 TYR B 162 SITE 1 BC7 3 TYR B 103 SER B 106 MAN B 507 SITE 1 BC8 5 MAN A 504 ALA B 105 SER B 109 ALA B 125 SITE 2 BC8 5 HOH B2093 SITE 1 BC9 3 SER B 106 SER B 110 MAN B 505 SITE 1 CC1 3 LEU B 111 SER B 115 GLN B 432 SITE 1 CC2 3 GLY B 118 THR B 122 ASP B 189
CRYST1 49.600 67.500 53.800 76.30 75.20 78.40 P 1 2
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.020161 -0.004138 -0.004605 0.00000
SCALE2 0.000000 0.015124 -0.003020 0.00000
SCALE3 0.000000 0.000000 0.019605 0.00000
MTRIX1 1 -0.999982 -0.004826 0.003536 33.08800 1
MTRIX2 1 -0.004027 0.105745 -0.994385 35.15500 1
MTRIX3 1 0.004425 -0.994382 -0.105762 22.25500 1