10 20 30 40 50 60 70 80 1GNE - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER TRANSFERASE 16-JUN-94 1GNE
TITLE THE THREE-DIMENSIONAL STRUCTURE OF GLUTATHIONE S-TRANSFERASE OF TITLE 2 SCHISTOSOMA JAPONICUM FUSED WITH A CONSERVED NEUTRALIZING EPITOPE ON TITLE 3 GP41 OF HUMAN IMMUNODEFICIENCY VIRUS TYPE 1
COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUTATHIONE S-TRANSFERASE; COMPND 3 CHAIN: A; COMPND 4 EC: 2.5.1.18; COMPND 5 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 3 ORGANISM_TAXID: 32630; SOURCE 4 ORGAN: LIVER; SOURCE 5 GENE: GP41; SOURCE 6 EXPRESSION_SYSTEM_GENE: GP41
KEYWDS GLUTATHIONE TRANSFERASE, TRANSFERASE
EXPDTA X-RAY DIFFRACTION
AUTHOR K.LIM,J.X.HO,K.KEELING,G.L.GILLILAND,X.JI,F.RUKER,D.C.CARTER
REVDAT 4 20-FEB-13 1GNE 1 REMARK REVDAT 3 21-MAR-12 1GNE 1 HET VERSN REVDAT 2 24-FEB-09 1GNE 1 VERSN REVDAT 1 30-NOV-94 1GNE 0
JRNL AUTH K.LIM,J.X.HO,K.KEELING,G.L.GILLILAND,X.JI,F.RUKER,D.C.CARTER JRNL TITL THREE-DIMENSIONAL STRUCTURE OF SCHISTOSOMA JAPONICUM JRNL TITL 2 GLUTATHIONE S-TRANSFERASE FUSED WITH A SIX-AMINO ACID JRNL TITL 3 CONSERVED NEUTRALIZING EPITOPE OF GP41 FROM HIV. JRNL REF PROTEIN SCI. V. 3 2233 1994 JRNL REFN ISSN 0961-8368 JRNL PMID 7538846
REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH D.C.CARTER,F.RUKER,J.X.HO,K.LIM,K.KEELING,G.L.GILLILAND,X.JI REMARK 1 TITL FUSION PROTEINS AS ALTERNATE CRYSTALLIZATION PATHS TO REMARK 1 TITL 2 DIFFICULT STRUCTURE PROBLEMS REMARK 1 REF PROTEIN PEPT.LETT. V. 1 175 1994 REMARK 1 REFN ISSN 0929-8665 REMARK 1 REFERENCE 2 REMARK 1 AUTH I.GARCIA-SAEZ,A.PARRAGA,M.F.PHILLIPS,T.J.MANTLE,M.COLL REMARK 1 TITL MOLECULAR STRUCTURE AT 1.8 ANGSTROMS OF MOUSE LIVER CLASS PI REMARK 1 TITL 2 GLUTATHIONE S-TRANSFERASE COMPLEXED WITH REMARK 1 TITL 3 S-(P-NITROBENZYL)GLUTATHIONE AND OTHER INHIBITORS REMARK 1 REF J.MOL.BIOL. V. 237 298 1994 REMARK 1 REFN ISSN 0022-2836 REMARK 1 REFERENCE 3 REMARK 1 AUTH G.L.GILLILAND REMARK 1 TITL GLUTATHIONE PROTEINS REMARK 1 REF CURR.OPIN.STRUCT.BIOL. V. 3 875 1993 REMARK 1 REFN ISSN 0959-440X REMARK 1 REFERENCE 4 REMARK 1 AUTH T.MUSTER,F.STEINDL,M.PURTSCHER,A.TRKOLA,A.KLIMA,G.HIMMLER, REMARK 1 AUTH 2 F.RUKER,H.KATINGER REMARK 1 TITL A CONSERVED NEUTRALIZING EPITOPE ON GP41 OF HUMAN REMARK 1 TITL 2 IMMUNODEFICIENCY VIRUS TYPE 1 REMARK 1 REF J.VIROL. V. 67 6642 1993 REMARK 1 REFN ISSN 0022-538X REMARK 1 REFERENCE 5 REMARK 1 AUTH I.SINNING,G.J.KLEYWEGT,S.W.COWAN,P.REINEMER,H.W.DIRR, REMARK 1 AUTH 2 R.HUBER,G.L.GILLILAND,R.N.ARMSTRONG,X.JI,P.G.BOARD,B.OLIN, REMARK 1 AUTH 3 B.MANNERVIK,T.A.JONES REMARK 1 TITL STRUCTURE DETERMINATION AND REFINEMENT OF HUMAN ALPHA CLASS REMARK 1 TITL 2 GLUTATHIONE TRANSFERASE A1-1, AND A COMPARISON WITH THE MU REMARK 1 TITL 3 AND PI CLASS ENZYMES REMARK 1 REF J.MOL.BIOL. V. 232 192 1993 REMARK 1 REFN ISSN 0022-2836 REMARK 1 REFERENCE 6 REMARK 1 AUTH X.JI,P.ZHANG,R.N.ARMSTRONG,G.L.GILLILAND REMARK 1 TITL THE THREE-DIMENSIONAL STRUCTURE OF A GLUTATHIONE REMARK 1 TITL 2 S-TRANSFERASE FROM THE MU GENE CLASS. STRUCTURAL ANALYSIS OF REMARK 1 TITL 3 THE BINARY COMPLEX OF ISOENZYME 3-3 AND GLUTATHIONE AT 2.2 REMARK 1 TITL 4 ANGSTROMS RESOLUTION REMARK 1 REF BIOCHEMISTRY V. 31 10169 1992 REMARK 1 REFN ISSN 0006-2960 REMARK 1 REFERENCE 7 REMARK 1 AUTH P.REINEMER,H.W.DIRR,R.LADENSTEIN,R.HUBER,M.LOBELLO, REMARK 1 AUTH 2 G.FEDERICI,M.W.PARKER REMARK 1 TITL THREE-DIMENSIONAL STRUCTURE OF CLASS P GLUTATHIONE REMARK 1 TITL 2 S-TRANSFERASE FROM HUMAN PLACENTA IN COMPLEX WITH REMARK 1 TITL 3 S-HEXYLGLUTATHIONE AT 2.8 ANGSTROMS RESOLUTION REMARK 1 REF J.MOL.BIOL. V. 227 214 1992 REMARK 1 REFN ISSN 0022-2836 REMARK 1 REFERENCE 8 REMARK 1 AUTH P.REINEMER,H.W.DIRR,R.LADENSTEIN,J.SCHIFFER,O.GALLAY,R.HUBER REMARK 1 TITL THE THREE-DIMENSIONAL STRUCTURE OF CLASS P GLUTATHIONE REMARK 1 TITL 2 S-TRANSFERASE IN COMPLEX WITH GLUTATHIONE SULFONATE AT 2.3 REMARK 1 TITL 3 ANGSTROMS RESOLUTION REMARK 1 REF EMBO J. V. 10 1997 1991 REMARK 1 REFN ISSN 0261-4189 REMARK 1 REFERENCE 9 REMARK 1 AUTH D.B.SMITH,K.S.JOHNSON REMARK 1 TITL SINGLE-STEP PURIFICATION OF POLYPEPTIDES EXPRESSED IN REMARK 1 TITL 2 ESCHERICHIA COLI AS FUSIONS WITH GLUTATHIONE S-TRANSFERASE REMARK 1 REF GENE V. 67 31 1988 REMARK 1 REFN ISSN 0378-1119 REMARK 1 REFERENCE 10 REMARK 1 AUTH D.B.SMITH,K.M.DAVERN,P.G.BOARD,W.U.TIU,E.G.GARCIA, REMARK 1 AUTH 2 G.F.MITCHELL REMARK 1 TITL CORRECTION REMARK 1 REF PROC.NATL.ACAD.SCI.USA V. 84 6541 1987 REMARK 1 REFN ISSN 0027-8424 REMARK 1 REFERENCE 11 REMARK 1 AUTH D.B.SMITH,K.M.DAVERN,P.G.BOARD,W.U.TIU,E.G.GARCIA, REMARK 1 AUTH 2 G.F.MITCHELL REMARK 1 TITL MR 26,000 ANTIGEN OF SCHISTOSOMA JAPONICUM RECOGNIZED BY REMARK 1 TITL 2 RESISTANT WEHI 129(SLASH)J MICE IS A PARASITE GLUTATHIONE REMARK 1 TITL 3 S-TRANSFERASE REMARK 1 REF PROC.NATL.ACAD.SCI.USA V. 83 8703 1986 REMARK 1 REFN ISSN 0027-8424
REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : GPRLSA, X-PLOR REMARK 3 AUTHORS : FUREY,BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 6.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 7622 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : 0.219 REMARK 3 R VALUE (WORKING SET) : 0.219 REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 FIT/AGREEMENT OF MODEL WITH ALL DATA. REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : NULL REMARK 3 FREE R VALUE (NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1905 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 20 REMARK 3 SOLVENT ATOMS : 126 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : NULL ; NULL REMARK 3 ANGLE DISTANCE (A) : NULL ; NULL REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : NULL ; NULL REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : NULL ; NULL REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : NULL ; NULL REMARK 3 MULTIPLE TORSION (A) : NULL ; NULL REMARK 3 H-BOND (X...Y) (A) : NULL ; NULL REMARK 3 H-BOND (X-H...Y) (A) : NULL ; NULL REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : NULL ; NULL REMARK 3 STAGGERED (DEGREES) : NULL ; NULL REMARK 3 TRANSVERSE (DEGREES) : NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1GNE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: X-PLOR REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.88 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.41 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 29.06500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 47.37000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 47.37000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 43.59750 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 47.37000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 47.37000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 14.53250 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 47.37000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 47.37000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 43.59750 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 47.37000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 47.37000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 14.53250 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 29.06500 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 29.06500
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 17 CD - NE - CZ ANGL. DEV. = 9.3 DEGREES REMARK 500 LEU A 19 CA - CB - CG ANGL. DEV. = 14.8 DEGREES REMARK 500 HIS A 30 CA - CB - CG ANGL. DEV. = 10.8 DEGREES REMARK 500 LEU A 31 CA - CB - CG ANGL. DEV. = 20.6 DEGREES REMARK 500 ARG A 34 CA - CB - CG ANGL. DEV. = 14.0 DEGREES REMARK 500 ARG A 34 NE - CZ - NH1 ANGL. DEV. = 5.4 DEGREES REMARK 500 ASP A 35 CB - CG - OD2 ANGL. DEV. = 5.6 DEGREES REMARK 500 ARG A 41 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 GLU A 50 CA - CB - CG ANGL. DEV. = 14.4 DEGREES REMARK 500 LEU A 54 CA - CB - CG ANGL. DEV. = 23.2 DEGREES REMARK 500 ARG A 72 CD - NE - CZ ANGL. DEV. = 14.9 DEGREES REMARK 500 ARG A 72 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 ARG A 88 CD - NE - CZ ANGL. DEV. = 18.9 DEGREES REMARK 500 ARG A 88 NE - CZ - NH2 ANGL. DEV. = -3.0 DEGREES REMARK 500 GLU A 95 CA - CB - CG ANGL. DEV. = 17.3 DEGREES REMARK 500 ARG A 102 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES REMARK 500 TYR A 103 CA - CB - CG ANGL. DEV. = 13.2 DEGREES REMARK 500 ARG A 107 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 GLU A 133 CA - CB - CG ANGL. DEV. = 15.2 DEGREES REMARK 500 ASP A 134 CB - CG - OD1 ANGL. DEV. = 8.9 DEGREES REMARK 500 ARG A 135 CD - NE - CZ ANGL. DEV. = 11.8 DEGREES REMARK 500 CYS A 137 N - CA - CB ANGL. DEV. = 11.4 DEGREES REMARK 500 THR A 140 CA - CB - CG2 ANGL. DEV. = 8.6 DEGREES REMARK 500 LEU A 142 CA - CB - CG ANGL. DEV. = 18.9 DEGREES REMARK 500 VAL A 160 CA - CB - CG1 ANGL. DEV. = 10.5 DEGREES REMARK 500 LEU A 162 CA - CB - CG ANGL. DEV. = 15.0 DEGREES REMARK 500 ASP A 170 CB - CG - OD1 ANGL. DEV. = 6.2 DEGREES REMARK 500 LEU A 175 CA - CB - CG ANGL. DEV. = 13.9 DEGREES REMARK 500 CYS A 177 CA - CB - SG ANGL. DEV. = 8.6 DEGREES REMARK 500 ARG A 181 CG - CD - NE ANGL. DEV. = 12.9 DEGREES REMARK 500 ARG A 181 CD - NE - CZ ANGL. DEV. = 11.0 DEGREES REMARK 500 ARG A 181 NE - CZ - NH1 ANGL. DEV. = 6.5 DEGREES REMARK 500 LYS A 196 CA - CB - CG ANGL. DEV. = 16.8 DEGREES REMARK 500 LYS A 217 CB - CA - C ANGL. DEV. = 12.8 DEGREES REMARK 500 LEU A 220 CA - CB - CG ANGL. DEV. = 21.3 DEGREES REMARK 500 VAL A 221 C - N - CA ANGL. DEV. = 17.1 DEGREES REMARK 500 ARG A 223 CD - NE - CZ ANGL. DEV. = 15.4 DEGREES REMARK 500 ARG A 223 NE - CZ - NH1 ANGL. DEV. = 4.6 DEGREES REMARK 500 ARG A 223 NE - CZ - NH2 ANGL. DEV. = -3.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 36 -17.30 -35.03 REMARK 500 LEU A 47 43.55 -76.83 REMARK 500 PRO A 52 108.31 -54.25 REMARK 500 ASP A 61 -77.34 -81.81 REMARK 500 GLN A 66 114.34 70.97 REMARK 500 ASN A 79 26.68 81.32 REMARK 500 PRO A 85 -60.16 -14.83 REMARK 500 ASP A 113 55.15 -92.61 REMARK 500 ASN A 143 39.26 85.25 REMARK 500 TRP A 200 151.69 171.90 REMARK 500 TRP A 205 -16.76 -44.67 REMARK 500 ASP A 213 -8.90 -151.11 REMARK 500 LYS A 217 -159.06 -87.64 REMARK 500 ASP A 219 20.48 -167.04 REMARK 500 LEU A 220 -151.96 -131.89 REMARK 500 PRO A 222 -163.11 -107.01 REMARK 500 ARG A 223 -34.74 -147.94 REMARK 500 GLU A 227 113.95 46.71 REMARK 500 LEU A 228 15.51 52.92 REMARK 500 LYS A 230 98.66 72.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 LYS A 10 -13.26 REMARK 500 GLU A 115 -15.37 REMARK 500 CYS A 168 -12.45 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 GLN A 14 22.1 L L OUTSIDE RANGE REMARK 500 TRP A 40 21.9 L L OUTSIDE RANGE REMARK 500 LEU A 125 23.0 L L OUTSIDE RANGE REMARK 500 CYS A 137 23.9 L L OUTSIDE RANGE REMARK 500 ASN A 143 24.7 L L OUTSIDE RANGE REMARK 500 HIS A 149 22.7 L L OUTSIDE RANGE REMARK 500 VAL A 161 24.8 L L OUTSIDE RANGE REMARK 500 PRO A 216 24.7 L L OUTSIDE RANGE REMARK 500 LYS A 230 23.9 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL
REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 247 DISTANCE = 5.41 ANGSTROMS REMARK 525 HOH A 250 DISTANCE = 5.78 ANGSTROMS REMARK 525 HOH A 296 DISTANCE = 5.95 ANGSTROMS REMARK 525 HOH A 359 DISTANCE = 6.07 ANGSTROMS
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GSH A 233
DBREF 1GNE A 1 217 UNP P08515 GST26_SCHJA 2 218
SEQRES 1 A 232 SER PRO ILE LEU GLY TYR TRP LYS ILE LYS GLY LEU VAL SEQRES 2 A 232 GLN PRO THR ARG LEU LEU LEU GLU TYR LEU GLU GLU LYS SEQRES 3 A 232 TYR GLU GLU HIS LEU TYR GLU ARG ASP GLU GLY ASP LYS SEQRES 4 A 232 TRP ARG ASN LYS LYS PHE GLU LEU GLY LEU GLU PHE PRO SEQRES 5 A 232 ASN LEU PRO TYR TYR ILE ASP GLY ASP VAL LYS LEU THR SEQRES 6 A 232 GLN SER MET ALA ILE ILE ARG TYR ILE ALA ASP LYS HIS SEQRES 7 A 232 ASN MET LEU GLY GLY CYS PRO LYS GLU ARG ALA GLU ILE SEQRES 8 A 232 SER MET LEU GLU GLY ALA VAL LEU ASP ILE ARG TYR GLY SEQRES 9 A 232 VAL SER ARG ILE ALA TYR SER LYS ASP PHE GLU THR LEU SEQRES 10 A 232 LYS VAL ASP PHE LEU SER LYS LEU PRO GLU MET LEU LYS SEQRES 11 A 232 MET PHE GLU ASP ARG LEU CYS HIS LYS THR TYR LEU ASN SEQRES 12 A 232 GLY ASP HIS VAL THR HIS PRO ASP PHE MET LEU TYR ASP SEQRES 13 A 232 ALA LEU ASP VAL VAL LEU TYR MET ASP PRO MET CYS LEU SEQRES 14 A 232 ASP ALA PHE PRO LYS LEU VAL CYS PHE LYS LYS ARG ILE SEQRES 15 A 232 GLU ALA ILE PRO GLN ILE ASP LYS TYR LEU LYS SER SER SEQRES 16 A 232 LYS TYR ILE ALA TRP PRO LEU GLN GLY TRP GLN ALA THR SEQRES 17 A 232 PHE GLY GLY GLY ASP HIS PRO PRO LYS SER ASP LEU VAL SEQRES 18 A 232 PRO ARG GLY SER MET GLU LEU ASP LYS TRP ALA
HET GSH A 233 20
HETNAM GSH GLUTATHIONE
FORMUL 2 GSH C10 H17 N3 O6 S FORMUL 3 HOH *126(H2 O)
HELIX 1 H1 GLN A 14 TYR A 22 1 9 HELIX 2 H2 ASP A 38 LYS A 43 1 6 HELIX 3 H3 SER A 67 LYS A 77 1 11 HELIX 4 H4 PRO A 85 TYR A 110 1BENDS BY ABOUT 15 DEGREES 26 HELIX 5 H5 ASP A 113 LEU A 136 1BENDS BY ABOUT 35 DEGREES 24 HELIX 6 H6 HIS A 149 MET A 164 1 16 HELIX 7 H7 PRO A 173 ALA A 184 1 12 HELIX 8 H8 PRO A 186 LEU A 192 1 7
SHEET 1 S1 4 TYR A 27 TYR A 32 0 SHEET 2 S1 4 PRO A 2 TYR A 6 1 O PRO A 2 N GLU A 28 SHEET 3 S1 4 TYR A 56 GLY A 60 -1 O ILE A 58 N ILE A 3 SHEET 4 S1 4 VAL A 62 THR A 65 -1 O VAL A 62 N ASP A 59
CISPEP 1 LEU A 54 PRO A 55 0 9.05 CISPEP 2 TRP A 200 PRO A 201 0 -5.35
SITE 1 AC1 19 TYR A 6 TRP A 7 LEU A 12 TRP A 40 SITE 2 AC1 19 LYS A 44 ASN A 53 LEU A 54 PRO A 55 SITE 3 AC1 19 GLN A 66 SER A 67 ASP A 100 HOH A 235 SITE 4 AC1 19 HOH A 243 HOH A 284 HOH A 289 HOH A 293 SITE 5 AC1 19 HOH A 333 HOH A 341 HOH A 348
CRYST1 94.740 94.740 58.130 90.00 90.00 90.00 P 43 21 2 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.010555 0.000000 0.000000 0.00000
SCALE2 0.000000 0.010555 0.000000 0.00000
SCALE3 0.000000 0.000000 0.017203 0.00000