10 20 30 40 50 60 70 80 1FV3 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER TOXIN 18-SEP-00 1FV3
TITLE THE HC FRAGMENT OF TETANUS TOXIN COMPLEXED WITH AN ANALOGUE OF ITS TITLE 2 GANGLIOSIDE RECEPTOR GT1B
COMPND MOL_ID: 1; COMPND 2 MOLECULE: TETANUS TOXIN HEAVY CHAIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: C-TERMINAL DOMAIN OF HEAVY CHAIN; COMPND 5 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CLOSTRIDIUM TETANI; SOURCE 3 ORGANISM_TAXID: 1513; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_PLASMID: PET28
KEYWDS TOXIN, CARBOHYDRATE, GANGLIOSIDE, MULTI-VALENT BINDING, RECEPTOR
EXPDTA X-RAY DIFFRACTION
AUTHOR C.FOTINOU,P.EMSLEY,I.BLACK,H.ANDO,H.ISHIDA,M.KISO,K.A.SINHA, AUTHOR 2 N.F.FAIRWEATHER,N.W.ISAACS
REVDAT 6 08-JUN-16 1FV3 1 REMARK REVDAT 5 13-JUL-11 1FV3 1 VERSN REVDAT 4 08-SEP-09 1FV3 1 LINK REVDAT 3 21-APR-09 1FV3 1 REMARK REVDAT 2 24-FEB-09 1FV3 1 VERSN REVDAT 1 05-SEP-01 1FV3 0
JRNL AUTH C.FOTINOU,P.EMSLEY,I.BLACK,H.ANDO,H.ISHIDA,M.KISO,K.A.SINHA, JRNL AUTH 2 N.F.FAIRWEATHER,N.W.ISAACS JRNL TITL THE CRYSTAL STRUCTURE OF TETANUS TOXIN HC FRAGMENT COMPLEXED JRNL TITL 2 WITH A SYNTHETIC GT1B ANALOGUE SUGGESTS CROSS-LINKING JRNL TITL 3 BETWEEN GANGLIOSIDE RECEPTORS AND THE TOXIN. JRNL REF J.BIOL.CHEM. V. 276 32274 2001 JRNL REFN ISSN 0021-9258 JRNL PMID 11418600 JRNL DOI 10.1074/JBC.M103285200
REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH P.EMSLEY,C.FOTINOU,I.BLACK,N.F.FAIRWEATHER,I.G.CHARLES, REMARK 1 AUTH 2 C.WATTS,E.HEWITT,N.W.ISAACS REMARK 1 TITL THE STRUCTURES OF THE HC FRAGMENT OF TETANUS TOXIN WITH REMARK 1 TITL 2 CARBOHYDRATE SUBUNIT COMPLEXES PROVIDE INSIGHT INTO REMARK 1 TITL 3 GANGLIOSIDE BINDING REMARK 1 REF J.BIOL.CHEM. V. 275 8889 2000 REMARK 1 REFN ISSN 0021-9258 REMARK 1 DOI 10.1074/JBC.275.12.8889 REMARK 1 REFERENCE 2 REMARK 1 AUTH T.C.UMLAND,L.M.WINGERT,S.SWAMINATHAN,W.F.FUREY,J.J.SCHMIDT, REMARK 1 AUTH 2 M.SAX REMARK 1 TITL STRUCTURE OF THE RECEPTOR BINDING FRAGMENT HC OF TETANUS REMARK 1 TITL 2 NEUROTOXIN REMARK 1 REF NAT.STRUCT.BIOL. V. 4 788 1997 REMARK 1 REFN ISSN 1072-8368
REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 3 NUMBER OF REFLECTIONS : 48094 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.239 REMARK 3 R VALUE (WORKING SET) : 0.237 REMARK 3 FREE R VALUE : 0.306 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1543 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.36 REMARK 3 REFLECTION IN BIN (WORKING SET) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.3340 REMARK 3 BIN FREE R VALUE SET COUNT : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7296 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 233 REMARK 3 SOLVENT ATOMS : 241 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 41.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.84 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 4.91000 REMARK 3 B22 (A**2) : -1.74000 REMARK 3 B33 (A**2) : -3.15000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -2.30000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.377 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.289 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.411 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 17.184 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : NULL REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): NULL ; NULL ; NULL REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): NULL ; NULL ; NULL REMARK 3 GENERAL PLANES REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 865 A 1110 REMARK 3 ORIGIN FOR THE GROUP (A): 18.7808 -8.2852 46.5551 REMARK 3 T TENSOR REMARK 3 T11: 0.0623 T22: 0.1056 REMARK 3 T33: 0.0890 T12: 0.0089 REMARK 3 T13: 0.0159 T23: 0.0507 REMARK 3 L TENSOR REMARK 3 L11: 0.8581 L22: 1.0479 REMARK 3 L33: 1.8892 L12: -0.2963 REMARK 3 L13: 0.6388 L23: -0.1479 REMARK 3 S TENSOR REMARK 3 S11: -0.0894 S12: -0.0792 S13: -0.1360 REMARK 3 S21: 0.0357 S22: -0.0405 S23: 0.0232 REMARK 3 S31: 0.1389 S32: 0.0381 S33: 0.1299 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1111 A 1315 REMARK 3 ORIGIN FOR THE GROUP (A): 3.5153 8.0843 19.3561 REMARK 3 T TENSOR REMARK 3 T11: 0.0509 T22: 0.0690 REMARK 3 T33: 0.0627 T12: 0.0083 REMARK 3 T13: -0.0478 T23: -0.0054 REMARK 3 L TENSOR REMARK 3 L11: 1.8706 L22: 1.2052 REMARK 3 L33: 2.1387 L12: -0.4071 REMARK 3 L13: 1.0114 L23: -0.6997 REMARK 3 S TENSOR REMARK 3 S11: -0.0670 S12: -0.0384 S13: 0.0290 REMARK 3 S21: 0.0244 S22: -0.0292 S23: 0.0639 REMARK 3 S31: -0.2265 S32: -0.0944 S33: 0.0962 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 865 B 1110 REMARK 3 ORIGIN FOR THE GROUP (A): 57.3482 41.7251 44.4922 REMARK 3 T TENSOR REMARK 3 T11: 0.1176 T22: 0.0557 REMARK 3 T33: 0.0597 T12: -0.0011 REMARK 3 T13: 0.0232 T23: -0.0225 REMARK 3 L TENSOR REMARK 3 L11: 0.6410 L22: 1.3820 REMARK 3 L33: 1.8507 L12: -0.0711 REMARK 3 L13: -0.1563 L23: 0.3219 REMARK 3 S TENSOR REMARK 3 S11: 0.0186 S12: -0.0442 S13: 0.0849 REMARK 3 S21: 0.1417 S22: 0.0844 S23: -0.0894 REMARK 3 S31: -0.2074 S32: 0.1305 S33: -0.1030 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1111 B 1315 REMARK 3 ORIGIN FOR THE GROUP (A): 55.2173 20.3635 16.2413 REMARK 3 T TENSOR REMARK 3 T11: 0.0166 T22: 0.0742 REMARK 3 T33: 0.0721 T12: 0.0051 REMARK 3 T13: 0.0328 T23: -0.0129 REMARK 3 L TENSOR REMARK 3 L11: 0.5441 L22: 1.4434 REMARK 3 L33: 2.5470 L12: -0.0793 REMARK 3 L13: -0.3345 L23: 0.8839 REMARK 3 S TENSOR REMARK 3 S11: 0.0240 S12: 0.0007 S13: -0.0014 REMARK 3 S21: -0.0427 S22: 0.0698 S23: -0.1338 REMARK 3 S31: -0.0035 S32: 0.1579 S33: -0.0938 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : NULL REMARK 3 ION PROBE RADIUS : NULL REMARK 3 SHRINKAGE RADIUS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: USE OF MAXIMUM LIKELILHOOD REFINEMENT REMARK 3 (REFMAC REFINEMENT PROGRAMM)
REMARK 4 REMARK 4 1FV3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-SEP-00. REMARK 100 THE RCSB ID CODE IS RCSB011925.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-APR-99 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID13 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.782 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 49658 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : 0.17300 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 3.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.3 REMARK 200 DATA REDUNDANCY IN SHELL : 3.10 REMARK 200 R MERGE FOR SHELL (I) : 0.97000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.63 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.65 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% POLYETHYLENE GLYCOL 8000, SODIUM- REMARK 280 POTASSIUM PHOSPHATE, TRIS, IMIDAZOLE, SODIUM CHLORIDE, PH 8.5, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 26.53400 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS MONOMER
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 844 REMARK 465 GLY A 845 REMARK 465 SER A 846 REMARK 465 SER A 847 REMARK 465 HIS A 848 REMARK 465 HIS A 849 REMARK 465 HIS A 850 REMARK 465 HIS A 851 REMARK 465 HIS A 852 REMARK 465 HIS A 853 REMARK 465 SER A 854 REMARK 465 SER A 855 REMARK 465 GLY A 856 REMARK 465 LEU A 857 REMARK 465 VAL A 858 REMARK 465 PRO A 859 REMARK 465 ARG A 860 REMARK 465 GLY A 861 REMARK 465 SER A 862 REMARK 465 HIS A 863 REMARK 465 MET A 864 REMARK 465 MET B 844 REMARK 465 GLY B 845 REMARK 465 SER B 846 REMARK 465 SER B 847 REMARK 465 HIS B 848 REMARK 465 HIS B 849 REMARK 465 HIS B 850 REMARK 465 HIS B 851 REMARK 465 HIS B 852 REMARK 465 HIS B 853 REMARK 465 SER B 854 REMARK 465 SER B 855 REMARK 465 GLY B 856 REMARK 465 LEU B 857 REMARK 465 VAL B 858 REMARK 465 PRO B 859 REMARK 465 ARG B 860 REMARK 465 GLY B 861 REMARK 465 SER B 862 REMARK 465 HIS B 863 REMARK 465 MET B 864
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O8 SLB B 6 C2 SIA B 7 1.50 REMARK 500 O8 SLB B 6 C1 SIA B 7 1.86 REMARK 500 O1 BGC B 1 C5 CEQ B 8 2.04 REMARK 500 C3 BGC A 1 O1 GAL A 2 2.04 REMARK 500 C3 GAL B 2 O1 NGA B 3 2.05 REMARK 500 O8 SLB A 6 C3 SIA A 7 2.08 REMARK 500 O8 SLB B 6 O1B SIA B 7 2.08 REMARK 500 O8 SLB A 6 O6 SIA A 7 2.09 REMARK 500 C1 BGC A 1 C6 CEQ A 8 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O ASN B 873 OE1 GLU B 1127 1565 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 868 CB - CG - OD2 ANGL. DEV. = 5.6 DEGREES REMARK 500 ASP A 872 CB - CG - OD2 ANGL. DEV. = 5.9 DEGREES REMARK 500 ASP A 945 CB - CG - OD2 ANGL. DEV. = 6.2 DEGREES REMARK 500 MET A 980 CB - CG - SD ANGL. DEV. = -20.1 DEGREES REMARK 500 ASP A1067 CB - CG - OD2 ANGL. DEV. = 5.6 DEGREES REMARK 500 ASN A1183 N - CA - C ANGL. DEV. = 18.6 DEGREES REMARK 500 ASP A1282 CB - CG - OD2 ANGL. DEV. = 5.5 DEGREES REMARK 500 ASP A1309 CB - CG - OD2 ANGL. DEV. = 6.0 DEGREES REMARK 500 ASP B1075 CB - CG - OD2 ANGL. DEV. = 8.3 DEGREES REMARK 500 ASP B1087 CB - CG - OD2 ANGL. DEV. = 6.9 DEGREES REMARK 500 LEU B1104 CB - CG - CD1 ANGL. DEV. = -12.2 DEGREES REMARK 500 ASP B1222 CB - CG - OD2 ANGL. DEV. = 7.8 DEGREES REMARK 500 ASP B1260 CB - CG - OD2 ANGL. DEV. = 6.0 DEGREES REMARK 500 ASP B1282 CB - CG - OD2 ANGL. DEV. = 6.2 DEGREES REMARK 500 ASP B1302 CB - CG - OD2 ANGL. DEV. = 5.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 866 -45.02 -28.97 REMARK 500 CYS A 869 -78.27 -84.80 REMARK 500 ASP A 872 -82.05 -114.82 REMARK 500 GLU A 874 32.66 -68.40 REMARK 500 LYS A 882 -70.05 -62.33 REMARK 500 ASN A 919 68.32 -172.70 REMARK 500 GLU A 929 19.26 -57.77 REMARK 500 MET A 939 -71.37 -37.08 REMARK 500 ASP A 940 26.05 -77.59 REMARK 500 ILE A 941 -18.27 -141.02 REMARK 500 GLU A 942 -57.09 -26.35 REMARK 500 ASN A 944 -54.40 -24.68 REMARK 500 PHE A 947 -30.26 -130.41 REMARK 500 TYR A 969 19.18 -141.13 REMARK 500 LYS A 981 132.35 -25.21 REMARK 500 HIS A 983 105.00 -169.73 REMARK 500 SER A1007 -38.21 -29.62 REMARK 500 ALA A1025 148.91 -25.95 REMARK 500 LEU A1027 56.71 -112.34 REMARK 500 SER A1042 -98.27 -153.42 REMARK 500 ALA A1063 91.34 64.04 REMARK 500 CYS A1093 52.52 -91.51 REMARK 500 ILE A1111 -31.48 -30.01 REMARK 500 THR A1112 -18.89 -49.26 REMARK 500 SER A1135 47.51 -142.52 REMARK 500 THR A1146 -19.69 89.94 REMARK 500 ASP A1147 -157.40 -105.35 REMARK 500 TYR A1170 24.59 87.19 REMARK 500 TYR A1180 -82.70 -55.80 REMARK 500 ASN A1203 38.00 77.08 REMARK 500 ASN A1204 -12.74 84.78 REMARK 500 LEU A1221 -34.94 -134.91 REMARK 500 ASP A1260 22.48 -77.64 REMARK 500 ASN A1262 21.67 80.93 REMARK 500 ASP B 868 -141.96 -178.49 REMARK 500 TRP B 870 11.78 -33.04 REMARK 500 ASP B 872 -30.47 178.98 REMARK 500 ASN B 873 62.55 -161.32 REMARK 500 GLU B 874 -69.52 -110.00 REMARK 500 GLU B 875 -166.87 -117.55 REMARK 500 ASN B 893 36.10 74.55 REMARK 500 ASN B 919 52.35 -175.28 REMARK 500 ASP B 940 -91.69 -81.41 REMARK 500 ASN B 944 87.05 -65.23 REMARK 500 ASN B 948 -176.76 -60.07 REMARK 500 PHE B 954 147.54 178.54 REMARK 500 ASN B 998 44.45 -106.27 REMARK 500 LEU B1027 70.68 -113.25 REMARK 500 ALA B1028 43.64 -162.15 REMARK 500 ASN B1029 1.37 96.91 REMARK 500 REMARK 500 THIS ENTRY HAS 70 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 PRO A 1182 ASN A 1183 -146.95 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 ASN A1029 18.9 L L OUTSIDE RANGE REMARK 500 ASN A1183 20.9 L L OUTSIDE RANGE REMARK 500 GLN B 968 24.5 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL
REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1373 DISTANCE = 5.38 ANGSTROMS REMARK 525 HOH B1461 DISTANCE = 5.67 ANGSTROMS
REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 BGC A 1 REMARK 610 BGC B 1 REMARK 610 SIA B 7
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BGC A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GAL A 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NGA A 3 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GAL A 4 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SIA A 5 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SLB A 6 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SIA A 7 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BGC B 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GAL B 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NGA B 3 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GAL B 4 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SIA B 5 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SLB B 6 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SIA B 7 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CEQ A 8 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CEQ B 8
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1D0H RELATED DB: PDB REMARK 900 1D0H CONTAINS THE SAME PROTEIN COMPLEXED WITH N-ACETYL- REMARK 900 GALACTOSAMINE REMARK 900 RELATED ID: 1DLL RELATED DB: PDB REMARK 900 1DLL CONTAINS THE SAME PROTEIN COMPLEXED WITH LACTOSE REMARK 900 RELATED ID: 1DIW RELATED DB: PDB REMARK 900 1DIW CONTAINS THE SAME PROTEIN COMPLEXED WITH GALACTOSE REMARK 900 RELATED ID: 1DFQ RELATED DB: PDB REMARK 900 1DFQ CONTAINS THE SAME PROTEIN COMPLEXED WITH SIALIC ACID REMARK 900 RELATED ID: 1AF9 RELATED DB: PDB REMARK 900 1AF9 CONTAINS THE STRUCTURE OF THE HC FRAGMENT TO 2.7 REMARK 900 RELATED ID: 1A8D RELATED DB: PDB REMARK 900 1A8D CONTAINS THE STRUCTURE OF THE HC FRAGMENT TO 1.57A REMARK 900 RELATED ID: 1FV2 RELATED DB: PDB
REMARK 999 REMARK 999 SEQUENCE REMARK 999 The HIS TAG was not cleaved and it is not seen in the density.
DBREF 1FV3 A 865 1315 UNP P04958 TETX_CLOTE 864 1314 DBREF 1FV3 B 865 1315 UNP P04958 TETX_CLOTE 864 1314
SEQADV 1FV3 MET A 844 P04958 SEE REMARK 999 SEQADV 1FV3 GLY A 845 P04958 SEE REMARK 999 SEQADV 1FV3 SER A 846 P04958 SEE REMARK 999 SEQADV 1FV3 SER A 847 P04958 SEE REMARK 999 SEQADV 1FV3 HIS A 848 P04958 SEE REMARK 999 SEQADV 1FV3 HIS A 849 P04958 SEE REMARK 999 SEQADV 1FV3 HIS A 850 P04958 SEE REMARK 999 SEQADV 1FV3 HIS A 851 P04958 SEE REMARK 999 SEQADV 1FV3 HIS A 852 P04958 SEE REMARK 999 SEQADV 1FV3 HIS A 853 P04958 SEE REMARK 999 SEQADV 1FV3 SER A 854 P04958 SEE REMARK 999 SEQADV 1FV3 SER A 855 P04958 SEE REMARK 999 SEQADV 1FV3 GLY A 856 P04958 SEE REMARK 999 SEQADV 1FV3 LEU A 857 P04958 SEE REMARK 999 SEQADV 1FV3 VAL A 858 P04958 SEE REMARK 999 SEQADV 1FV3 PRO A 859 P04958 SEE REMARK 999 SEQADV 1FV3 ARG A 860 P04958 SEE REMARK 999 SEQADV 1FV3 GLY A 861 P04958 SEE REMARK 999 SEQADV 1FV3 SER A 862 P04958 SEE REMARK 999 SEQADV 1FV3 HIS A 863 P04958 SEE REMARK 999 SEQADV 1FV3 MET A 864 P04958 SEE REMARK 999 SEQADV 1FV3 MET B 844 P04958 SEE REMARK 999 SEQADV 1FV3 GLY B 845 P04958 SEE REMARK 999 SEQADV 1FV3 SER B 846 P04958 SEE REMARK 999 SEQADV 1FV3 SER B 847 P04958 SEE REMARK 999 SEQADV 1FV3 HIS B 848 P04958 SEE REMARK 999 SEQADV 1FV3 HIS B 849 P04958 SEE REMARK 999 SEQADV 1FV3 HIS B 850 P04958 SEE REMARK 999 SEQADV 1FV3 HIS B 851 P04958 SEE REMARK 999 SEQADV 1FV3 HIS B 852 P04958 SEE REMARK 999 SEQADV 1FV3 HIS B 853 P04958 SEE REMARK 999 SEQADV 1FV3 SER B 854 P04958 SEE REMARK 999 SEQADV 1FV3 SER B 855 P04958 SEE REMARK 999 SEQADV 1FV3 GLY B 856 P04958 SEE REMARK 999 SEQADV 1FV3 LEU B 857 P04958 SEE REMARK 999 SEQADV 1FV3 VAL B 858 P04958 SEE REMARK 999 SEQADV 1FV3 PRO B 859 P04958 SEE REMARK 999 SEQADV 1FV3 ARG B 860 P04958 SEE REMARK 999 SEQADV 1FV3 GLY B 861 P04958 SEE REMARK 999 SEQADV 1FV3 SER B 862 P04958 SEE REMARK 999 SEQADV 1FV3 HIS B 863 P04958 SEE REMARK 999 SEQADV 1FV3 MET B 864 P04958 SEE REMARK 999
SEQRES 1 A 472 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 472 LEU VAL PRO ARG GLY SER HIS MET LYS ASN LEU ASP CYS SEQRES 3 A 472 TRP VAL ASP ASN GLU GLU ASP ILE ASP VAL ILE LEU LYS SEQRES 4 A 472 LYS SER THR ILE LEU ASN LEU ASP ILE ASN ASN ASP ILE SEQRES 5 A 472 ILE SER ASP ILE SER GLY PHE ASN SER SER VAL ILE THR SEQRES 6 A 472 TYR PRO ASP ALA GLN LEU VAL PRO GLY ILE ASN GLY LYS SEQRES 7 A 472 ALA ILE HIS LEU VAL ASN ASN GLU SER SER GLU VAL ILE SEQRES 8 A 472 VAL HIS LYS ALA MET ASP ILE GLU TYR ASN ASP MET PHE SEQRES 9 A 472 ASN ASN PHE THR VAL SER PHE TRP LEU ARG VAL PRO LYS SEQRES 10 A 472 VAL SER ALA SER HIS LEU GLU GLN TYR GLY THR ASN GLU SEQRES 11 A 472 TYR SER ILE ILE SER SER MET LYS LYS HIS SER LEU SER SEQRES 12 A 472 ILE GLY SER GLY TRP SER VAL SER LEU LYS GLY ASN ASN SEQRES 13 A 472 LEU ILE TRP THR LEU LYS ASP SER ALA GLY GLU VAL ARG SEQRES 14 A 472 GLN ILE THR PHE ARG ASP LEU PRO ASP LYS PHE ASN ALA SEQRES 15 A 472 TYR LEU ALA ASN LYS TRP VAL PHE ILE THR ILE THR ASN SEQRES 16 A 472 ASP ARG LEU SER SER ALA ASN LEU TYR ILE ASN GLY VAL SEQRES 17 A 472 LEU MET GLY SER ALA GLU ILE THR GLY LEU GLY ALA ILE SEQRES 18 A 472 ARG GLU ASP ASN ASN ILE THR LEU LYS LEU ASP ARG CYS SEQRES 19 A 472 ASN ASN ASN ASN GLN TYR VAL SER ILE ASP LYS PHE ARG SEQRES 20 A 472 ILE PHE CYS LYS ALA LEU ASN PRO LYS GLU ILE GLU LYS SEQRES 21 A 472 LEU TYR THR SER TYR LEU SER ILE THR PHE LEU ARG ASP SEQRES 22 A 472 PHE TRP GLY ASN PRO LEU ARG TYR ASP THR GLU TYR TYR SEQRES 23 A 472 LEU ILE PRO VAL ALA SER SER SER LYS ASP VAL GLN LEU SEQRES 24 A 472 LYS ASN ILE THR ASP TYR MET TYR LEU THR ASN ALA PRO SEQRES 25 A 472 SER TYR THR ASN GLY LYS LEU ASN ILE TYR TYR ARG ARG SEQRES 26 A 472 LEU TYR ASN GLY LEU LYS PHE ILE ILE LYS ARG TYR THR SEQRES 27 A 472 PRO ASN ASN GLU ILE ASP SER PHE VAL LYS SER GLY ASP SEQRES 28 A 472 PHE ILE LYS LEU TYR VAL SER TYR ASN ASN ASN GLU HIS SEQRES 29 A 472 ILE VAL GLY TYR PRO LYS ASP GLY ASN ALA PHE ASN ASN SEQRES 30 A 472 LEU ASP ARG ILE LEU ARG VAL GLY TYR ASN ALA PRO GLY SEQRES 31 A 472 ILE PRO LEU TYR LYS LYS MET GLU ALA VAL LYS LEU ARG SEQRES 32 A 472 ASP LEU LYS THR TYR SER VAL GLN LEU LYS LEU TYR ASP SEQRES 33 A 472 ASP LYS ASN ALA SER LEU GLY LEU VAL GLY THR HIS ASN SEQRES 34 A 472 GLY GLN ILE GLY ASN ASP PRO ASN ARG ASP ILE LEU ILE SEQRES 35 A 472 ALA SER ASN TRP TYR PHE ASN HIS LEU LYS ASP LYS ILE SEQRES 36 A 472 LEU GLY CYS ASP TRP TYR PHE VAL PRO THR ASP GLU GLY SEQRES 37 A 472 TRP THR ASN ASP SEQRES 1 B 472 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 472 LEU VAL PRO ARG GLY SER HIS MET LYS ASN LEU ASP CYS SEQRES 3 B 472 TRP VAL ASP ASN GLU GLU ASP ILE ASP VAL ILE LEU LYS SEQRES 4 B 472 LYS SER THR ILE LEU ASN LEU ASP ILE ASN ASN ASP ILE SEQRES 5 B 472 ILE SER ASP ILE SER GLY PHE ASN SER SER VAL ILE THR SEQRES 6 B 472 TYR PRO ASP ALA GLN LEU VAL PRO GLY ILE ASN GLY LYS SEQRES 7 B 472 ALA ILE HIS LEU VAL ASN ASN GLU SER SER GLU VAL ILE SEQRES 8 B 472 VAL HIS LYS ALA MET ASP ILE GLU TYR ASN ASP MET PHE SEQRES 9 B 472 ASN ASN PHE THR VAL SER PHE TRP LEU ARG VAL PRO LYS SEQRES 10 B 472 VAL SER ALA SER HIS LEU GLU GLN TYR GLY THR ASN GLU SEQRES 11 B 472 TYR SER ILE ILE SER SER MET LYS LYS HIS SER LEU SER SEQRES 12 B 472 ILE GLY SER GLY TRP SER VAL SER LEU LYS GLY ASN ASN SEQRES 13 B 472 LEU ILE TRP THR LEU LYS ASP SER ALA GLY GLU VAL ARG SEQRES 14 B 472 GLN ILE THR PHE ARG ASP LEU PRO ASP LYS PHE ASN ALA SEQRES 15 B 472 TYR LEU ALA ASN LYS TRP VAL PHE ILE THR ILE THR ASN SEQRES 16 B 472 ASP ARG LEU SER SER ALA ASN LEU TYR ILE ASN GLY VAL SEQRES 17 B 472 LEU MET GLY SER ALA GLU ILE THR GLY LEU GLY ALA ILE SEQRES 18 B 472 ARG GLU ASP ASN ASN ILE THR LEU LYS LEU ASP ARG CYS SEQRES 19 B 472 ASN ASN ASN ASN GLN TYR VAL SER ILE ASP LYS PHE ARG SEQRES 20 B 472 ILE PHE CYS LYS ALA LEU ASN PRO LYS GLU ILE GLU LYS SEQRES 21 B 472 LEU TYR THR SER TYR LEU SER ILE THR PHE LEU ARG ASP SEQRES 22 B 472 PHE TRP GLY ASN PRO LEU ARG TYR ASP THR GLU TYR TYR SEQRES 23 B 472 LEU ILE PRO VAL ALA SER SER SER LYS ASP VAL GLN LEU SEQRES 24 B 472 LYS ASN ILE THR ASP TYR MET TYR LEU THR ASN ALA PRO SEQRES 25 B 472 SER TYR THR ASN GLY LYS LEU ASN ILE TYR TYR ARG ARG SEQRES 26 B 472 LEU TYR ASN GLY LEU LYS PHE ILE ILE LYS ARG TYR THR SEQRES 27 B 472 PRO ASN ASN GLU ILE ASP SER PHE VAL LYS SER GLY ASP SEQRES 28 B 472 PHE ILE LYS LEU TYR VAL SER TYR ASN ASN ASN GLU HIS SEQRES 29 B 472 ILE VAL GLY TYR PRO LYS ASP GLY ASN ALA PHE ASN ASN SEQRES 30 B 472 LEU ASP ARG ILE LEU ARG VAL GLY TYR ASN ALA PRO GLY SEQRES 31 B 472 ILE PRO LEU TYR LYS LYS MET GLU ALA VAL LYS LEU ARG SEQRES 32 B 472 ASP LEU LYS THR TYR SER VAL GLN LEU LYS LEU TYR ASP SEQRES 33 B 472 ASP LYS ASN ALA SER LEU GLY LEU VAL GLY THR HIS ASN SEQRES 34 B 472 GLY GLN ILE GLY ASN ASP PRO ASN ARG ASP ILE LEU ILE SEQRES 35 B 472 ALA SER ASN TRP TYR PHE ASN HIS LEU LYS ASP LYS ILE SEQRES 36 B 472 LEU GLY CYS ASP TRP TYR PHE VAL PRO THR ASP GLU GLY SEQRES 37 B 472 TRP THR ASN ASP
HET BGC A 1 11 HET GAL A 2 10 HET NGA A 3 14 HET GAL A 4 11 HET SIA A 5 21 HET SLB A 6 21 HET SIA A 7 20 HET BGC B 1 11 HET GAL B 2 10 HET NGA B 3 14 HET GAL B 4 11 HET SIA B 5 21 HET SLB B 6 21 HET SIA B 7 20 HET PO4 B 301 5 HET CEQ A 8 12 HET CEQ B 8 12
HETNAM BGC BETA-D-GLUCOSE HETNAM GAL BETA-D-GALACTOSE HETNAM NGA N-ACETYL-D-GALACTOSAMINE HETNAM SIA O-SIALIC ACID HETNAM SLB 5-N-ACETYL-BETA-D-NEURAMINIC ACID HETNAM PO4 PHOSPHATE ION HETNAM CEQ ETHYL-TRIMETHYL-SILANE
HETSYN SLB BETA-SIALIC ACID
FORMUL 3 BGC 2(C6 H12 O6) FORMUL 3 GAL 4(C6 H12 O6) FORMUL 3 NGA 2(C8 H15 N O6) FORMUL 3 SIA 4(C11 H19 N O9) FORMUL 3 SLB 2(C11 H19 N O9) FORMUL 5 PO4 O4 P 3- FORMUL 6 CEQ 2(C5 H14 SI) FORMUL 8 HOH *241(H2 O)
HELIX 1 1 ASP A 876 SER A 884 1 9 HELIX 2 2 ALA A 938 GLU A 942 5 5 HELIX 3 3 TYR A 943 PHE A 947 5 5 HELIX 4 4 SER A 962 TYR A 969 1 8 HELIX 5 5 ASN A 1097 SER A 1107 1 11 HELIX 6 6 ALA A 1134 SER A 1136 5 3 HELIX 7 7 ASN A 1219 LEU A 1221 5 3 HELIX 8 8 ASN A 1288 HIS A 1293 5 6 HELIX 9 9 ASP B 876 SER B 884 1 9 HELIX 10 10 SER B 962 GLY B 970 1 9 HELIX 11 11 ASN B 1097 SER B 1107 1 11 HELIX 12 12 ALA B 1134 SER B 1136 5 3 HELIX 13 13 TRP B 1289 LEU B 1294 5 6
SHEET 1 A11 ILE A 895 ASP A 898 0 SHEET 2 A11 THR A 885 ASN A 892 -1 N ASP A 890 O SER A 897 SHEET 3 A11 TYR A1083 PHE A1092 -1 O PHE A1089 N LEU A 889 SHEET 4 A11 GLY A 920 VAL A 926 -1 O ILE A 923 N ILE A1086 SHEET 5 A11 GLN A 913 GLY A 917 -1 O GLN A 913 N HIS A 924 SHEET 6 A11 GLY A 920 VAL A 926 -1 O GLY A 920 N GLY A 917 SHEET 7 A11 TYR A1083 PHE A1092 -1 O VAL A1084 N LEU A 925 SHEET 8 A11 PHE A 950 ARG A 957 -1 O THR A 951 N PHE A1092 SHEET 9 A11 VAL A1032 ASN A1038 -1 O VAL A1032 N LEU A 956 SHEET 10 A11 SER A1043 ILE A1048 -1 N ASN A1045 O THR A1037 SHEET 11 A11 VAL A1051 GLU A1057 -1 O VAL A1051 N ILE A1048 SHEET 1 B 7 SER A 905 THR A 908 0 SHEET 2 B 7 VAL A 933 HIS A 936 -1 N ILE A 934 O ILE A 907 SHEET 3 B 7 ASN A1069 ASP A1075 -1 O ILE A1070 N VAL A 935 SHEET 4 B 7 TYR A 974 SER A 978 -1 O SER A 975 N ASP A1075 SHEET 5 B 7 GLY A 990 LYS A 996 -1 N VAL A 993 O ILE A 977 SHEET 6 B 7 ASN A 999 ASP A1006 -1 O ASN A 999 N LYS A 996 SHEET 7 B 7 GLU A1010 ARG A1017 -1 O GLU A1010 N ASP A1006 SHEET 1 C 2 LYS A 982 HIS A 983 0 SHEET 2 C 2 SER A 986 ILE A 987 -1 O SER A 986 N HIS A 983 SHEET 1 D 8 TRP A1303 VAL A1306 0 SHEET 2 D 8 GLU A1127 PRO A1132 -1 O TYR A1129 N VAL A1306 SHEET 3 D 8 LYS A1174 ARG A1179 -1 O PHE A1175 N TYR A1128 SHEET 4 D 8 ASP A1194 TYR A1202 -1 N LYS A1197 O LYS A1178 SHEET 5 D 8 ASN A1205 PRO A1212 -1 O ASN A1205 N TYR A1202 SHEET 6 D 8 ARG A1226 VAL A1227 -1 N ARG A1226 O GLY A1210 SHEET 7 D 8 ASN A1205 PRO A1212 -1 O GLY A1210 N ARG A1226 SHEET 8 D 8 LEU A1236 TYR A1237 -1 N TYR A1237 O TYR A1211 SHEET 1 E10 TRP A1303 VAL A1306 0 SHEET 2 E10 GLU A1127 PRO A1132 -1 O TYR A1129 N VAL A1306 SHEET 3 E10 LYS A1174 ARG A1179 -1 O PHE A1175 N TYR A1128 SHEET 4 E10 ASP A1194 TYR A1202 -1 N LYS A1197 O LYS A1178 SHEET 5 E10 MET A1240 VAL A1243 -1 N MET A1240 O ILE A1196 SHEET 6 E10 GLN A1254 TYR A1258 -1 O GLN A1254 N VAL A1243 SHEET 7 E10 SER A1264 GLY A1273 -1 N LEU A1265 O LEU A1257 SHEET 8 E10 ARG A1281 SER A1287 -1 N ARG A1281 O GLY A1273 SHEET 9 E10 ASP A1222 ILE A1224 -1 N ARG A1223 O ALA A1286 SHEET 10 E10 ALA A1217 PHE A1218 -1 O PHE A1218 N ASP A1222 SHEET 1 F 2 LYS A1138 LEU A1142 0 SHEET 2 F 2 MET A1149 ASN A1153 -1 O TYR A1150 N GLN A1141 SHEET 1 G 2 SER A1156 ASN A1159 0 SHEET 2 G 2 ILE A1164 ARG A1167 -1 N ILE A1164 O ASN A1159 SHEET 1 H11 ILE B 896 ASP B 898 0 SHEET 2 H11 THR B 885 ILE B 891 -1 O ASP B 890 N SER B 897 SHEET 3 H11 TYR B1083 PHE B1092 -1 O PHE B1089 N LEU B 889 SHEET 4 H11 GLY B 920 VAL B 926 -1 N ILE B 923 O ILE B1086 SHEET 5 H11 GLN B 913 GLY B 917 -1 O GLN B 913 N HIS B 924 SHEET 6 H11 GLY B 920 VAL B 926 -1 O GLY B 920 N GLY B 917 SHEET 7 H11 TYR B1083 PHE B1092 -1 O VAL B1084 N LEU B 925 SHEET 8 H11 PHE B 950 ARG B 957 -1 O THR B 951 N PHE B1092 SHEET 9 H11 VAL B1032 ASN B1038 -1 O VAL B1032 N LEU B 956 SHEET 10 H11 SER B1043 ILE B1048 -1 N ASN B1045 O THR B1037 SHEET 11 H11 VAL B1051 GLU B1057 -1 O VAL B1051 N ILE B1048 SHEET 1 I 7 SER B 905 THR B 908 0 SHEET 2 I 7 GLU B 932 HIS B 936 -1 O ILE B 934 N ILE B 907 SHEET 3 I 7 ASN B1069 ASP B1075 -1 N ILE B1070 O VAL B 935 SHEET 4 I 7 TYR B 974 SER B 978 -1 N SER B 975 O ASP B1075 SHEET 5 I 7 GLY B 990 LEU B 995 -1 O VAL B 993 N ILE B 976 SHEET 6 I 7 ASN B 999 LYS B1005 -1 O ILE B1001 N SER B 994 SHEET 7 I 7 VAL B1011 ARG B1017 -1 N ARG B1012 O LEU B1004 SHEET 1 J 2 LYS B 982 HIS B 983 0 SHEET 2 J 2 SER B 986 ILE B 987 -1 O SER B 986 N HIS B 983 SHEET 1 K 8 TRP B1303 VAL B1306 0 SHEET 2 K 8 GLU B1127 PRO B1132 -1 O TYR B1129 N VAL B1306 SHEET 3 K 8 LYS B1174 ARG B1179 -1 N PHE B1175 O TYR B1128 SHEET 4 K 8 ASP B1194 SER B1201 -1 O LYS B1197 N LYS B1178 SHEET 5 K 8 GLU B1206 PRO B1212 -1 N HIS B1207 O VAL B1200 SHEET 6 K 8 ARG B1226 VAL B1227 -1 N ARG B1226 O GLY B1210 SHEET 7 K 8 GLU B1206 PRO B1212 -1 O GLY B1210 N ARG B1226 SHEET 8 K 8 LEU B1236 TYR B1237 -1 N TYR B1237 O TYR B1211 SHEET 1 L10 TRP B1303 VAL B1306 0 SHEET 2 L10 GLU B1127 PRO B1132 -1 O TYR B1129 N VAL B1306 SHEET 3 L10 LYS B1174 ARG B1179 -1 N PHE B1175 O TYR B1128 SHEET 4 L10 ASP B1194 SER B1201 -1 O LYS B1197 N LYS B1178 SHEET 5 L10 LYS B1239 VAL B1243 -1 O MET B1240 N ILE B1196 SHEET 6 L10 GLN B1254 TYR B1258 -1 O GLN B1254 N VAL B1243 SHEET 7 L10 SER B1264 GLY B1273 -1 N LEU B1265 O LEU B1257 SHEET 8 L10 ARG B1281 SER B1287 -1 N ARG B1281 O GLY B1273 SHEET 9 L10 ASP B1222 ILE B1224 -1 O ARG B1223 N ALA B1286 SHEET 10 L10 ALA B1217 PHE B1218 -1 N PHE B1218 O ASP B1222
SSBOND 1 CYS A 869 CYS A 1093 1555 1555 2.03 SSBOND 2 CYS B 869 CYS B 1093 1555 1555 2.04
LINK O1 BGC B 1 C6 ACEQ B 8 1555 1555 1.34 LINK O1 BGC B 1 C6 BCEQ B 8 1555 1555 1.34 LINK O1 BGC A 1 C6 ACEQ A 8 1555 1555 1.33 LINK O1 BGC A 1 C6 BCEQ A 8 1555 1555 1.31 LINK C4 BGC A 1 O1 GAL A 2 1555 1555 1.32 LINK C3 GAL A 2 O2 SLB A 6 1555 1555 1.33 LINK C4 GAL A 2 O1 NGA A 3 1555 1555 1.34 LINK C3 NGA A 3 O1 GAL A 4 1555 1555 1.34 LINK C3 GAL A 4 O2 SIA A 5 1555 1555 1.45 LINK O8 SLB A 6 C2 SIA A 7 1555 1555 1.46 LINK C4 BGC B 1 O1 GAL B 2 1555 1555 1.32 LINK C3 GAL B 2 O2 SLB B 6 1555 1555 1.33 LINK C4 GAL B 2 O1 NGA B 3 1555 1555 1.34 LINK C3 NGA B 3 O1 GAL B 4 1555 1555 1.32 LINK C3 GAL B 4 O2 SIA B 5 1555 1555 1.34
SITE 1 AC1 3 GAL A 2 CEQ A 8 ASN A1219 SITE 1 AC2 5 BGC A 1 NGA A 3 SLB A 6 ASN A1219 SITE 2 AC2 5 HOH A1366 SITE 1 AC3 6 GAL A 2 GAL A 4 SLB A 6 ASP A1222 SITE 2 AC3 6 HIS A1271 TRP A1289 SITE 1 AC4 7 NGA A 3 SIA A 5 ASP A1222 THR A1270 SITE 2 AC4 7 HIS A1271 ILE A1285 TYR A1290 SITE 1 AC5 2 GAL A 4 TRP A1289 SITE 1 AC6 4 GAL A 2 NGA A 3 SIA A 7 HOH A1351 SITE 1 AC7 1 SLB A 6 SITE 1 AC8 2 GAL B 2 CEQ B 8 SITE 1 AC9 4 BGC B 1 NGA B 3 SLB B 6 ASN B1219 SITE 1 BC1 6 GAL B 2 GAL B 4 SLB B 6 ASN B1219 SITE 2 BC1 6 ASP B1222 HIS B1271 SITE 1 BC2 6 NGA B 3 SIA B 5 ASP B1222 THR B1270 SITE 2 BC2 6 HIS B1271 TRP B1289 SITE 1 BC3 3 GAL B 4 TRP B1289 HOH B1338 SITE 1 BC4 6 GAL B 2 NGA B 3 SIA B 7 TRP B1289 SITE 2 BC4 6 HOH B1359 HOH B1447 SITE 1 BC5 1 SLB B 6 SITE 1 BC6 5 HIS B 983 GLY B 988 SER B 989 SER B1007 SITE 2 BC6 5 ARG B1065 SITE 1 BC7 1 BGC A 1 SITE 1 BC8 1 BGC B 1
CRYST1 91.311 53.068 118.278 90.00 89.78 90.00 P 1 21 1 4
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.010950 0.000000 -0.000040 0.00000
SCALE2 0.000000 0.018840 0.000000 0.00000
SCALE3 0.000000 0.000000 0.008450 0.00000