10 20 30 40 50 60 70 80 1FSG - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER TRANSFERASE 08-SEP-00 1FSG
TITLE TOXOPLASMA GONDII HYPOXANTHINE-GUANINE PHOSPHORIBOSYLTRANSFERASE TITLE 2 COMPLEXED WITH 9-DEAZAGUANINE, ALPHA-D-5-PHOSPHORIBOSYL-1- TITLE 3 PYROPHOSPHATE (PRPP) AND TWO MG2+ IONS
COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOXANTHINE-GUANINE PHOSPHORIBOSYLTRANSFERASE; COMPND 3 CHAIN: A, C; COMPND 4 SYNONYM: HGPRTASE; COMPND 5 EC: 2.4.2.8; COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TOXOPLASMA GONDII; SOURCE 3 ORGANISM_TAXID: 383379; SOURCE 4 STRAIN: RH; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PET15B; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PETC1
KEYWDS GLYCOSYLTRANSFERASE, PURINE SALVAGE, TRANSFERASE
EXPDTA X-RAY DIFFRACTION
AUTHOR A.HEROUX,E.L.WHITE,L.J.ROSS,A.P.KUZIN,D.W.BORHANI
REVDAT 4 13-JUL-11 1FSG 1 VERSN REVDAT 3 24-FEB-09 1FSG 1 VERSN REVDAT 2 09-OCT-02 1FSG 1 REMARK REVDAT 1 06-DEC-00 1FSG 0
JRNL AUTH A.HEROUX,E.L.WHITE,L.J.ROSS,A.P.KUZIN,D.W.BORHANI JRNL TITL SUBSTRATE DEFORMATION IN A HYPOXANTHINE-GUANINE JRNL TITL 2 PHOSPHORIBOSYLTRANSFERASE TERNARY COMPLEX: THE STRUCTURAL JRNL TITL 3 BASIS FOR CATALYSIS. JRNL REF STRUCTURE FOLD.DES. V. 8 1309 2000 JRNL REFN ISSN 0969-2126 JRNL PMID 11188695 JRNL DOI 10.1016/S0969-2126(00)00546-3
REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH A.HEROUX,E.L.WHITE,L.J.ROSS,R.L.DAVIS,D.W.BORHANI REMARK 1 TITL CRYSTAL STRUCTURES OF THE TOXOPLASMA GONDII REMARK 1 TITL 2 HYPOXANTHINE-GUANINE PHOSPHORIBOSYLTRANSFERASE-GMP AND -IMP REMARK 1 TITL 3 COMPLEXES:COMPARISON OF PURINE BINDING INTERACTIONS WITH THE REMARK 1 TITL 4 XMP COMPLEX REMARK 1 REF BIOCHEMISTRY V. 38 14485 1999 REMARK 1 REFN ISSN 0006-2960 REMARK 1 DOI 10.1021/BI990507Q REMARK 1 REFERENCE 2 REMARK 1 AUTH A.HEROUX,E.L.WHITE,L.J.ROSS,D.W.BORHANI REMARK 1 TITL CRYSTAL STRUCTURE OF TOXOPLASMA GONDII HYPOXANTHINE-GUANINE REMARK 1 TITL 2 PHOSPHORIBOSYLTRANSFERASE WITH XMP, PYROPHOSPHATE, AND TWO REMARK 1 TITL 3 MG(2+) IONS BOUND:INSIGHTS INTO THE CATALYTIC MECHANISM REMARK 1 REF BIOCHEMISTRY V. 38 14495 1999 REMARK 1 REFN ISSN 0006-2960 REMARK 1 DOI 10.1021/BI990508I REMARK 1 REFERENCE 3 REMARK 1 AUTH G.VASANTHAKUMAR,S.VAN GINKEL,G.PARISH REMARK 1 TITL ISOLATION AND SEQUENCING OF A CDNA ENCODING THE REMARK 1 TITL 2 HYPOXANTHINE-GUANINE PHOSPHORIBOSYLTRANSFERASE FROM REMARK 1 TITL 3 TOXOPLASMA GONDII REMARK 1 REF GENE V. 147 153 1994 REMARK 1 REFN ISSN 0378-1119 REMARK 1 DOI 10.1016/0378-1119(94)90058-2
REMARK 2 REMARK 2 RESOLUTION. 1.05 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : SHELXL-97 REMARK 3 AUTHORS : G.M.SHELDRICK REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : 5% OF THE REFLECTIONS WERE REMARK 3 RANDOMLY SELECTED FOR THE REMARK 3 TEST SET. REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (NO CUTOFF). REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : 0.122 REMARK 3 FREE R VALUE (NO CUTOFF) : 0.154 REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : 11158 REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : 220433 REMARK 3 REMARK 3 FIT/AGREEMENT OF MODEL FOR DATA WITH F>4SIG(F). REMARK 3 R VALUE (WORKING + TEST SET, F>4SIG(F)) : NULL REMARK 3 R VALUE (WORKING SET, F>4SIG(F)) : NULL REMARK 3 FREE R VALUE (F>4SIG(F)) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, F>4SIG(F)) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (F>4SIG(F)) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (F>4SIG(F)) : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3760 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 70 REMARK 3 SOLVENT ATOMS : 939 REMARK 3 REMARK 3 MODEL REFINEMENT. REMARK 3 OCCUPANCY SUM OF NON-HYDROGEN ATOMS : NULL REMARK 3 OCCUPANCY SUM OF HYDROGEN ATOMS : NULL REMARK 3 NUMBER OF DISCRETELY DISORDERED RESIDUES : NULL REMARK 3 NUMBER OF LEAST-SQUARES PARAMETERS : NULL REMARK 3 NUMBER OF RESTRAINTS : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM RESTRAINT TARGET VALUES. REMARK 3 BOND LENGTHS (A) : 0.015 REMARK 3 ANGLE DISTANCES (A) : 2.340 REMARK 3 SIMILAR DISTANCES (NO TARGET VALUES) (A) : NULL REMARK 3 DISTANCES FROM RESTRAINT PLANES (A) : NULL REMARK 3 ZERO CHIRAL VOLUMES (A**3) : NULL REMARK 3 NON-ZERO CHIRAL VOLUMES (A**3) : NULL REMARK 3 ANTI-BUMPING DISTANCE RESTRAINTS (A) : NULL REMARK 3 RIGID-BOND ADP COMPONENTS (A**2) : NULL REMARK 3 SIMILAR ADP COMPONENTS (A**2) : NULL REMARK 3 APPROXIMATELY ISOTROPIC ADPS (A**2) : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED: SHELX SWAT REMARK 3 REMARK 3 STEREOCHEMISTRY TARGET VALUES : ENGH & HUBER REMARK 3 SPECIAL CASE: NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REFINEMENT WITH X-PLOR, THEN REFMAC AND REMARK 3 ARP ALTERNATED WITH MANUAL REBUILDING IN O TO REDUCE THE FREE-R REMARK 3 TO 20.2% (35-1.05A). THE MODEL CONTAINED AT THAT POINT ALTERNATE REMARK 3 CONFORMATIONS, A CIS-PEPTIDE BOND (LEU78-LYS79), AND THE ACTIVE REMARK 3 SITE LIGANDS, ALL OF WHICH WERE PLACED IN UNAMBIGUOUS ELECTRON REMARK 3 DENSITY. REFINEMENT CONTINUED WITH SHELX-97, WITH REFINEMENT OF REMARK 3 ANISOTROPIC TEMPERATURE FACTORS. RIDING HYDROGEN ATOMS WERE ADDED REMARK 3 IN THE LATTER STAGES. NO RESTRAINTS WERE IMPOSED ON THE ATOMS OF REMARK 3 9-DEAZAGUANINE, PHOSPHORIBOSYLPYROPHOSPHATE, THE MAGNESIUM REMARK 3 CATIONS AND THEIR SURROUNDING WATER MOLECULES IN THE LATTER REMARK 3 STAGES OF THE REFINEMENT.
REMARK 4 REMARK 4 1FSG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-OCT-00. REMARK 100 THE RCSB ID CODE IS RCSB011862.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-MAR-99 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.783 REMARK 200 MONOCHROMATOR : SI (111) REMARK 200 OPTICS : RH-COATED MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 220504 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.050 REMARK 200 RESOLUTION RANGE LOW (A) : 35.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 4.200 REMARK 200 R MERGE (I) : 0.07200 REMARK 200 R SYM (I) : 0.07200 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 8.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.05 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.08 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 3.30 REMARK 200 R MERGE FOR SHELL (I) : 0.55500 REMARK 200 R SYM FOR SHELL (I) : 0.55500 REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: UNPUBLISHED T. GONDII HGPRT-GMP COMPLEX STRUCTURE. REMARK 200 LOOPS, WATERS AND GMP WERE REMOVED FROM ALL SUBUNITS OF THE REMARK 200 MOLECULAR REPLACEMENT MODEL. REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.22 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: THE PROTEIN (20 MG ML-1) WAS MIXED REMARK 280 WITH A SOLUTION CONSISTING OF 30% PEG 4000, 100 MM TRIS.HCL (PH REMARK 280 8.0), 200 MM LI2SO4, AND 0.5 % BETA-OCTYLGLUCOPYRANOSIDE. THE REMARK 280 CRYSTAL WAS GROWN IN THE PRESENCE OF 2 MM 9-DEAZAGUANINE, 2 MM REMARK 280 PRPP AND 10 MM MGCL2 AT 277 K. THE CRYSTAL GREW IN 2 DAYS., VAPOR REMARK 280 DIFFUSION, HANGING DROP
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 34.66500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 45.09000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 34.66500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 45.09000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 15740 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 34050 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -169.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 69.33000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 90.18000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000
REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH C1768 LIES ON A SPECIAL POSITION.
REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 7 CG CD OE1 OE2
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 TYR A 20 CB - CG - CD1 ANGL. DEV. = -3.9 DEGREES REMARK 500 LYS A 39 CD - CE - NZ ANGL. DEV. = 16.4 DEGREES REMARK 500 PHE A 68 CB - CG - CD1 ANGL. DEV. = 6.2 DEGREES REMARK 500 PHE A 68 CG - CD1 - CE1 ANGL. DEV. = 6.8 DEGREES REMARK 500 ASN A 86 CB - CG - OD1 ANGL. DEV. = 17.2 DEGREES REMARK 500 GLN A 96 OE1 - CD - NE2 ANGL. DEV. = -14.5 DEGREES REMARK 500 ARG A 138 NE - CZ - NH1 ANGL. DEV. = 4.6 DEGREES REMARK 500 ARG A 161 NE - CZ - NH2 ANGL. DEV. = -4.6 DEGREES REMARK 500 ARG A 179 NH1 - CZ - NH2 ANGL. DEV. = -7.8 DEGREES REMARK 500 ARG A 179 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 ARG A 179 NE - CZ - NH2 ANGL. DEV. = 4.6 DEGREES REMARK 500 ARG A 182 NH1 - CZ - NH2 ANGL. DEV. = -6.7 DEGREES REMARK 500 ARG A 182 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG A 182 NE - CZ - NH2 ANGL. DEV. = 3.6 DEGREES REMARK 500 TRP A 199 CD1 - NE1 - CE2 ANGL. DEV. = -6.8 DEGREES REMARK 500 CYS A 203 CB - CA - C ANGL. DEV. = 7.5 DEGREES REMARK 500 ASP A 222 CB - CG - OD1 ANGL. DEV. = -7.4 DEGREES REMARK 500 ARG A 225 NE - CZ - NH2 ANGL. DEV. = -4.0 DEGREES REMARK 500 ASP C 8 CB - CG - OD1 ANGL. DEV. = 10.1 DEGREES REMARK 500 ARG C 55 NE - CZ - NH1 ANGL. DEV. = 4.9 DEGREES REMARK 500 ARG C 55 NE - CZ - NH2 ANGL. DEV. = -3.6 DEGREES REMARK 500 GLU C 71 N - CA - CB ANGL. DEV. = 17.8 DEGREES REMARK 500 ARG C 82 NE - CZ - NH1 ANGL. DEV. = -4.0 DEGREES REMARK 500 ASN C 86 OD1 - CG - ND2 ANGL. DEV. = -15.7 DEGREES REMARK 500 ASN C 86 CB - CG - ND2 ANGL. DEV. = 22.1 DEGREES REMARK 500 ASP C 132 CB - CG - OD1 ANGL. DEV. = 6.2 DEGREES REMARK 500 ARG C 161 NE - CZ - NH1 ANGL. DEV. = 7.1 DEGREES REMARK 500 ARG C 161 NE - CZ - NH2 ANGL. DEV. = -5.5 DEGREES REMARK 500 ARG C 179 NE - CZ - NH1 ANGL. DEV. = 4.6 DEGREES REMARK 500 HIS C 216 CG - ND1 - CE1 ANGL. DEV. = 6.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 120 -129.49 50.01 REMARK 500 ASP A 150 -84.85 -121.99 REMARK 500 SER A 185 -2.27 81.62 REMARK 500 CYS A 204 -16.28 83.00 REMARK 500 GLU A 209 -1.62 78.46 REMARK 500 PHE A 211 1.77 87.24 REMARK 500 ASN C 120 -133.09 50.80 REMARK 500 ASP C 150 -87.73 -121.63 REMARK 500 SER C 185 -1.09 81.46 REMARK 500 CYS C 204 -15.70 82.82 REMARK 500 GLU C 209 -2.65 77.26 REMARK 500 PHE C 211 1.21 86.30 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 GLU C 71 46.5 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL
REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 301 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A1931 O REMARK 620 2 HOH A1930 O 102.4 REMARK 620 3 PRP A 303 O3 83.2 92.3 REMARK 620 4 PRP A 303 O1 89.5 165.6 80.9 REMARK 620 5 PRP A 303 O2 156.2 92.5 77.7 73.7 REMARK 620 6 PRP A 303 O1B 98.6 95.8 171.0 90.3 98.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 302 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A1932 O REMARK 620 2 HOH A1934 O 173.0 REMARK 620 3 HOH A1933 O 88.4 86.3 REMARK 620 4 PRP A 303 O2A 91.2 94.0 95.9 REMARK 620 5 PRP A 303 O2B 89.4 95.2 172.2 91.6 REMARK 620 6 ASP A 206 OD1 88.1 86.8 84.9 178.9 87.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C 301 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH C1935 O REMARK 620 2 HOH C1936 O 102.3 REMARK 620 3 PRP C 303 O1B 96.8 97.8 REMARK 620 4 PRP C 303 O3 92.1 83.3 170.5 REMARK 620 5 PRP C 303 O1 164.8 90.1 90.1 80.4 REMARK 620 6 PRP C 303 O2 92.8 155.7 99.2 77.2 72.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C 302 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH C1939 O REMARK 620 2 HOH C1938 O 85.2 REMARK 620 3 HOH C1937 O 172.8 88.8 REMARK 620 4 PRP C 303 O2B 95.6 173.0 89.8 REMARK 620 5 ASP C 206 OD1 86.6 85.4 88.9 87.7 REMARK 620 6 PRP C 303 O2A 92.7 94.6 91.8 92.3 179.3 REMARK 620 N 1 2 3 4 5
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG C 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG C 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PRP A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 9DG A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PRP C 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 9DG C 304
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1DBR RELATED DB: PDB REMARK 900 1DBR IS HYPOXANTHINE GUANINE XANTHINE REMARK 900 PHOSPHORIBOSYLTRANSFERASE REMARK 900 RELATED ID: 1HMP RELATED DB: PDB REMARK 900 1HMP IS HYPOXANTHINE GUANINE PHOSPHORIBOSYLTRANSFERASE REMARK 900 RELATED ID: 1QK3 RELATED DB: PDB REMARK 900 1QK3 IS HYPOXANTHINE GUANINE PHOSPHORIBOSYLTRANSFERASE REMARK 900 RELATED ID: 1QK4 RELATED DB: PDB REMARK 900 1QK4 IS HYPOXANTHINE GUANINE PHOSPHORIBOSYLTRANSFERASE REMARK 900 RELATED ID: 1QK5 RELATED DB: PDB REMARK 900 1QK5 IS HYPOXANTHINE GUANINE PHOSPHORIBOSYLTRANSFERASE REMARK 900 RELATED ID: 1TC2 RELATED DB: PDB REMARK 900 1TC2 IS HYPOXANTHINE PHOSPHORIBOSYLTRANSFERASE REMARK 900 RELATED ID: 1BZY RELATED DB: PDB REMARK 900 1BZY IS HYPOXANTHINE-GUANINE PHOSPHORIBOSYLTRANSFERASE
DBREF 1FSG A 1 230 UNP Q26997 HGXR_TOXGO 1 230 DBREF 1FSG C 1 230 UNP Q26997 HGXR_TOXGO 1 230
SEQADV 1FSG GLY A 0A UNP Q26997 CLONING ARTIFACT SEQADV 1FSG SER A 0B UNP Q26997 CLONING ARTIFACT SEQADV 1FSG HIS A 0C UNP Q26997 CLONING ARTIFACT SEQADV 1FSG GLY C 0A UNP Q26997 CLONING ARTIFACT SEQADV 1FSG SER C 0B UNP Q26997 CLONING ARTIFACT SEQADV 1FSG HIS C 0C UNP Q26997 CLONING ARTIFACT
SEQRES 1 A 233 GLY SER HIS MET ALA SER LYS PRO ILE GLU ASP TYR GLY SEQRES 2 A 233 LYS GLY LYS GLY ARG ILE GLU PRO MET TYR ILE PRO ASP SEQRES 3 A 233 ASN THR PHE TYR ASN ALA ASP ASP PHE LEU VAL PRO PRO SEQRES 4 A 233 HIS CYS LYS PRO TYR ILE ASP LYS ILE LEU LEU PRO GLY SEQRES 5 A 233 GLY LEU VAL LYS ASP ARG VAL GLU LYS LEU ALA TYR ASP SEQRES 6 A 233 ILE HIS ARG THR TYR PHE GLY GLU GLU LEU HIS ILE ILE SEQRES 7 A 233 CYS ILE LEU LYS GLY SER ARG GLY PHE PHE ASN LEU LEU SEQRES 8 A 233 ILE ASP TYR LEU ALA THR ILE GLN LYS TYR SER GLY ARG SEQRES 9 A 233 GLU SER SER VAL PRO PRO PHE PHE GLU HIS TYR VAL ARG SEQRES 10 A 233 LEU LYS SER TYR GLN ASN ASP ASN SER THR GLY GLN LEU SEQRES 11 A 233 THR VAL LEU SER ASP ASP LEU SER ILE PHE ARG ASP LYS SEQRES 12 A 233 HIS VAL LEU ILE VAL GLU ASP ILE VAL ASP THR GLY PHE SEQRES 13 A 233 THR LEU THR GLU PHE GLY GLU ARG LEU LYS ALA VAL GLY SEQRES 14 A 233 PRO LYS SER MET ARG ILE ALA THR LEU VAL GLU LYS ARG SEQRES 15 A 233 THR ASP ARG SER ASN SER LEU LYS GLY ASP PHE VAL GLY SEQRES 16 A 233 PHE SER ILE GLU ASP VAL TRP ILE VAL GLY CYS CYS TYR SEQRES 17 A 233 ASP PHE ASN GLU MET PHE ARG ASP PHE ASP HIS VAL ALA SEQRES 18 A 233 VAL LEU SER ASP ALA ALA ARG LYS LYS PHE GLU LYS SEQRES 1 C 233 GLY SER HIS MET ALA SER LYS PRO ILE GLU ASP TYR GLY SEQRES 2 C 233 LYS GLY LYS GLY ARG ILE GLU PRO MET TYR ILE PRO ASP SEQRES 3 C 233 ASN THR PHE TYR ASN ALA ASP ASP PHE LEU VAL PRO PRO SEQRES 4 C 233 HIS CYS LYS PRO TYR ILE ASP LYS ILE LEU LEU PRO GLY SEQRES 5 C 233 GLY LEU VAL LYS ASP ARG VAL GLU LYS LEU ALA TYR ASP SEQRES 6 C 233 ILE HIS ARG THR TYR PHE GLY GLU GLU LEU HIS ILE ILE SEQRES 7 C 233 CYS ILE LEU LYS GLY SER ARG GLY PHE PHE ASN LEU LEU SEQRES 8 C 233 ILE ASP TYR LEU ALA THR ILE GLN LYS TYR SER GLY ARG SEQRES 9 C 233 GLU SER SER VAL PRO PRO PHE PHE GLU HIS TYR VAL ARG SEQRES 10 C 233 LEU LYS SER TYR GLN ASN ASP ASN SER THR GLY GLN LEU SEQRES 11 C 233 THR VAL LEU SER ASP ASP LEU SER ILE PHE ARG ASP LYS SEQRES 12 C 233 HIS VAL LEU ILE VAL GLU ASP ILE VAL ASP THR GLY PHE SEQRES 13 C 233 THR LEU THR GLU PHE GLY GLU ARG LEU LYS ALA VAL GLY SEQRES 14 C 233 PRO LYS SER MET ARG ILE ALA THR LEU VAL GLU LYS ARG SEQRES 15 C 233 THR ASP ARG SER ASN SER LEU LYS GLY ASP PHE VAL GLY SEQRES 16 C 233 PHE SER ILE GLU ASP VAL TRP ILE VAL GLY CYS CYS TYR SEQRES 17 C 233 ASP PHE ASN GLU MET PHE ARG ASP PHE ASP HIS VAL ALA SEQRES 18 C 233 VAL LEU SER ASP ALA ALA ARG LYS LYS PHE GLU LYS
HET MG A 301 1 HET MG A 302 1 HET MG C 301 1 HET MG C 302 1 HET PRP A 303 22 HET 9DG A 304 11 HET PRP C 303 22 HET 9DG C 304 11
HETNAM MG MAGNESIUM ION HETNAM PRP ALPHA-PHOSPHORIBOSYLPYROPHOSPHORIC ACID HETNAM 9DG 9-DEAZAGUANINE
FORMUL 3 MG 4(MG 2+) FORMUL 7 PRP 2(C5 H13 O14 P3) FORMUL 8 9DG 2(C6 H6 N4 O) FORMUL 11 HOH *939(H2 O)
HELIX 1 1 SER A 0B SER A 3 5 5 HELIX 2 2 PRO A 5 TYR A 9 5 5 HELIX 3 3 ASP A 30 PHE A 32 5 3 HELIX 4 4 PRO A 48 PHE A 68 1 21 HELIX 5 5 SER A 81 SER A 99 1 19 HELIX 6 6 ASP A 133 ARG A 138 5 6 HELIX 7 7 GLY A 152 ALA A 164 1 13 HELIX 8 8 SER A 221 GLU A 229 1 9 HELIX 9 9 GLY C 0A SER C 3 1 6 HELIX 10 10 PRO C 5 TYR C 9 5 5 HELIX 11 11 ASP C 30 PHE C 32 5 3 HELIX 12 12 PRO C 48 PHE C 68 1 21 HELIX 13 13 SER C 81 GLY C 100 1 20 HELIX 14 14 ASP C 133 ARG C 138 5 6 HELIX 15 15 GLY C 152 ALA C 164 1 13 HELIX 16 16 SER C 221 GLU C 229 1 9
SHEET 1 A 7 MET A 19 TYR A 20 0 SHEET 2 A 7 PHE A 190 ILE A 195 1 O GLY A 192 N MET A 19 SHEET 3 A 7 SER A 169 LYS A 178 1 O ILE A 172 N PHE A 190 SHEET 4 A 7 HIS A 141 VAL A 149 1 N VAL A 142 O SER A 169 SHEET 5 A 7 LEU A 72 LEU A 78 1 N HIS A 73 O HIS A 141 SHEET 6 A 7 PHE A 109 GLN A 119 1 O PHE A 109 N ILE A 74 SHEET 7 A 7 ASN A 122 LEU A 130 -1 N ASN A 122 O GLN A 119 SHEET 1 B 4 TYR A 27 ASN A 28 0 SHEET 2 B 4 LYS A 44 LEU A 47 -1 O ILE A 45 N TYR A 27 SHEET 3 B 4 VAL A 217 VAL A 219 -1 N VAL A 217 O LEU A 47 SHEET 4 B 4 ILE A 200 VAL A 201 -1 O VAL A 201 N ALA A 218 SHEET 1 C 7 MET C 19 TYR C 20 0 SHEET 2 C 7 PHE C 190 ILE C 195 1 O GLY C 192 N MET C 19 SHEET 3 C 7 SER C 169 LYS C 178 1 O ILE C 172 N PHE C 190 SHEET 4 C 7 HIS C 141 VAL C 149 1 N VAL C 142 O SER C 169 SHEET 5 C 7 LEU C 72 LEU C 78 1 N HIS C 73 O HIS C 141 SHEET 6 C 7 PHE C 109 GLN C 119 1 O PHE C 109 N ILE C 74 SHEET 7 C 7 ASN C 122 SER C 131 -1 N ASN C 122 O GLN C 119 SHEET 1 D 4 TYR C 27 ASN C 28 0 SHEET 2 D 4 LYS C 44 LEU C 47 -1 O ILE C 45 N TYR C 27 SHEET 3 D 4 VAL C 217 VAL C 219 -1 N VAL C 217 O LEU C 47 SHEET 4 D 4 ILE C 200 VAL C 201 -1 O VAL C 201 N ALA C 218
LINK MG MG A 301 O HOH A1931 1555 1555 2.04 LINK MG MG A 301 O HOH A1930 1555 1555 2.06 LINK MG MG A 302 O HOH A1932 1555 1555 2.14 LINK MG MG A 302 O HOH A1934 1555 1555 2.04 LINK MG MG A 302 O HOH A1933 1555 1555 2.12 LINK MG MG C 301 O HOH C1935 1555 1555 2.03 LINK MG MG C 301 O HOH C1936 1555 1555 2.04 LINK MG MG C 302 O HOH C1939 1555 1555 2.07 LINK MG MG C 302 O HOH C1938 1555 1555 2.14 LINK MG MG C 302 O HOH C1937 1555 1555 2.14 LINK MG MG A 301 O3 PRP A 303 1555 1555 2.12 LINK MG MG A 301 O1 PRP A 303 1555 1555 2.30 LINK MG MG A 301 O2 PRP A 303 1555 1555 2.10 LINK MG MG A 301 O1B PRP A 303 1555 1555 1.98 LINK MG MG A 302 O2A PRP A 303 1555 1555 2.04 LINK MG MG A 302 O2B PRP A 303 1555 1555 2.07 LINK MG MG A 302 OD1 ASP A 206 1555 1555 2.11 LINK MG MG C 301 O1B PRP C 303 1555 1555 1.97 LINK MG MG C 301 O3 PRP C 303 1555 1555 2.11 LINK MG MG C 301 O1 PRP C 303 1555 1555 2.30 LINK MG MG C 301 O2 PRP C 303 1555 1555 2.10 LINK MG MG C 302 O2B PRP C 303 1555 1555 2.04 LINK MG MG C 302 OD1 ASP C 206 1555 1555 2.13 LINK MG MG C 302 O2A PRP C 303 1555 1555 2.03
CISPEP 1 LEU A 78 LYS A 79 0 -3.27 CISPEP 2 LEU C 78 LYS C 79 0 -2.55
SITE 1 AC1 3 PRP A 303 HOH A1930 HOH A1931 SITE 1 AC2 5 ASP A 206 PRP A 303 HOH A1932 HOH A1933 SITE 2 AC2 5 HOH A1934 SITE 1 AC3 3 PRP C 303 HOH C1935 HOH C1936 SITE 1 AC4 5 ASP C 206 PRP C 303 HOH C1937 HOH C1938 SITE 2 AC4 5 HOH C1939 SITE 1 AC5 28 LYS A 79 GLY A 80 ARG A 114 LYS A 116 SITE 2 AC5 28 SER A 117 TYR A 118 GLU A 146 ASP A 147 SITE 3 AC5 28 ILE A 148 ASP A 150 THR A 151 GLY A 152 SITE 4 AC5 28 PHE A 153 THR A 154 ASP A 206 ARG A 212 SITE 5 AC5 28 MG A 301 MG A 302 9DG A 304 HOH A1004 SITE 6 AC5 28 HOH A1009 HOH A1019 HOH A1045 HOH A1930 SITE 7 AC5 28 HOH A1931 HOH A1932 HOH A1933 HOH A1934 SITE 1 AC6 10 TYR A 118 ASP A 150 LYS A 178 VAL A 198 SITE 2 AC6 10 TRP A 199 ILE A 200 TYR A 205 ASP A 206 SITE 3 AC6 10 PRP A 303 HOH A1934 SITE 1 AC7 27 LYS C 79 GLY C 80 ARG C 114 LYS C 116 SITE 2 AC7 27 SER C 117 TYR C 118 GLU C 146 ASP C 147 SITE 3 AC7 27 ILE C 148 ASP C 150 THR C 151 GLY C 152 SITE 4 AC7 27 THR C 154 ASP C 206 ARG C 212 MG C 301 SITE 5 AC7 27 MG C 302 9DG C 304 HOH C1070 HOH C1075 SITE 6 AC7 27 HOH C1085 HOH C1109 HOH C1935 HOH C1936 SITE 7 AC7 27 HOH C1937 HOH C1938 HOH C1939 SITE 1 AC8 9 TYR C 118 ASP C 150 LYS C 178 TRP C 199 SITE 2 AC8 9 ILE C 200 TYR C 205 ASP C 206 PRP C 303 SITE 3 AC8 9 HOH C1939
CRYST1 69.330 90.180 75.720 90.00 90.00 90.00 P 21 21 2 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.014420 0.000000 0.000000 0.00000
SCALE2 0.000000 0.011090 0.000000 0.00000
SCALE3 0.000000 0.000000 0.013210 0.00000