10 20 30 40 50 60 70 80 1FL4 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER HYDROLASE 11-AUG-00 1FL4
TITLE THEORETICAL MODEL OF BOVINE PHOSPHODIESTERASE 5 1ST GAF TITLE 2 DOMAIN
COMPND MOL_ID: 1; COMPND 2 MOLECULE: CGMP-SPECIFIC 3'-5'-CYCLIC PHOSPHODIESTERASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CGB-PDE, CGMP-BINDING CGMP-SPECIFIC COMPND 5 PHOSPHODIESTERASE; COMPND 6 EC: 3.1.4.17
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BOS TAURUS; SOURCE 3 ORGANISM_COMMON: BOVINE
KEYWDS PHOSPHODIESTERASE, GAF DOMAIN, HOMOLOGY MODEL, CGMP BINDING KEYWDS 2 DOMAIN
EXPDTA THEORETICAL MODEL
AUTHOR Y.-S.J.HO,L.M.BURDEN,J.H.HURLEY
REVDAT 2 01-APR-03 1FL4 1 JRNL REVDAT 1 25-OCT-00 1FL4 0
JRNL AUTH Y.S.HO,L.M.BURDEN,J.H.HURLEY JRNL TITL STRUCTURE OF THE GAF DOMAIN, A UBIQUITOUS JRNL TITL 2 SIGNALING MOTIF AND A NEW CLASS OF CYCLIC GMP JRNL TITL 3 RECEPTOR. JRNL REF EMBO J. V. 19 5288 2000 JRNL REFN ASTM EMJODG UK ISSN 0261-4189
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : LOOK 3.5.2 3.5.2 REMARK 3 AUTHORS : C. LEE, T. TVERSKY, P. GENTRY REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1FL4 COMPLIES WITH FORMAT V. 2.3, 09-JULY-1998
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-SEP-2000. REMARK 100 THE RCSB ID CODE IS RCSB011680.
REMARK 220 REMARK 220 EXPERIMENTAL DETAILS REMARK 220 EXPERIMENT TYPE : THEORETICAL MODELLING REMARK 220 REMARK 220 REMARK: IT IS A THEORETICAL MODEL MADE WITH LOOK. THIS VERSION REMARK 220 WAS MINIMIZED WITH CNS 1.0 USING HARMONIC RESTRAINTS ON REMARK 220 CA ATOMS FOR 200 CYCLES.
REMARK 225 REMARK 225 THEORETICAL MODEL REMARK 225 THE COORDINATES IN THIS ENTRY REPRESENT A MODEL STRUCTURE. REMARK 225 PROTEIN DATA BANK CONVENTIONS REQUIRE THAT CRYST1 AND REMARK 225 SCALE RECORDS BE INCLUDED, BUT THE VALUES ON THESE REMARK 225 RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),F6.3) REMARK 500 REMARK 500 EXPECTED VALUES: ENGH AND HUBER, 1991 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ARG A 265 CB ARG A 265 CG -0.032 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES: ENGH AND HUBER, 1991 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 203 N - CA - C ANGL. DEV. = -8.2 DEGREES REMARK 500 GLU A 205 N - CA - C ANGL. DEV. = 7.3 DEGREES REMARK 500 ASN A 209 N - CA - C ANGL. DEV. = 6.9 DEGREES REMARK 500 THR A 253 N - CA - C ANGL. DEV. = 10.0 DEGREES REMARK 500 ASN A 263 N - CA - C ANGL. DEV. = 6.6 DEGREES
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1F5M RELATED DB: PDB REMARK 900 1F5M IS STRUCTURE OF THE GAF DOMAIN
DBREF 1FL4 A 118 309 UNP Q28156 CN5A_BOVIN 118 309
SEQRES 1 A 192 SER ASP LYS LYS GLU GLN MET PRO LEU THR SER PRO ARG SEQRES 2 A 192 PHE ASP ASN ASP GLU GLY ASP GLN CYS SER ARG LEU LEU SEQRES 3 A 192 GLU LEU VAL LYS ASP ILE SER SER HIS LEU ASP VAL THR SEQRES 4 A 192 ALA LEU CYS HIS LYS ILE PHE LEU HIS ILE HIS GLY LEU SEQRES 5 A 192 ILE SER ALA ASP ARG TYR SER LEU PHE LEU VAL CYS GLU SEQRES 6 A 192 ASP SER SER ASN ASP LYS PHE LEU ILE SER ARG LEU PHE SEQRES 7 A 192 ASP VAL ALA GLU GLY SER THR LEU GLU GLU ALA SER ASN SEQRES 8 A 192 ASN CYS ILE ARG LEU GLU TRP ASN LYS GLY ILE VAL GLY SEQRES 9 A 192 HIS VAL ALA ALA PHE GLY GLU PRO LEU ASN ILE LYS ASP SEQRES 10 A 192 ALA TYR GLU ASP PRO ARG PHE ASN ALA GLU VAL ASP GLN SEQRES 11 A 192 ILE THR GLY TYR LYS THR GLN SER ILE LEU CYS MET PRO SEQRES 12 A 192 ILE LYS ASN HIS ARG GLU GLU VAL VAL GLY VAL ALA GLN SEQRES 13 A 192 ALA ILE ASN LYS LYS SER GLY ASN GLY GLY THR PHE THR SEQRES 14 A 192 GLU LYS ASP GLU LYS ASP PHE ALA ALA TYR LEU ALA PHE SEQRES 15 A 192 CYS GLY ILE VAL LEU HIS ASN ALA GLN LEU
HELIX 1 1 ASP A 134 SER A 150 1 17 HELIX 2 2 ALA A 157 SER A 171 1 15 HELIX 3 3 LYS A 217 GLY A 227 1 11 HELIX 4 4 LYS A 277 ASN A 281 5 5 HELIX 5 5 THR A 286 VAL A 303 1 18
SHEET 1 A 6 LEU A 230 ILE A 232 0 SHEET 2 A 6 ILE A 256 LYS A 262 -1 N ILE A 256 O ILE A 232 SHEET 3 A 6 VAL A 268 ILE A 275 -1 N VAL A 269 O ILE A 261 SHEET 4 A 6 ARG A 174 VAL A 180 -1 O ARG A 174 N ILE A 275 SHEET 5 A 6 LEU A 190 SER A 192 -1 N SER A 192 O LEU A 179 SHEET 6 A 6 ARG A 212 GLU A 214 -1 N LEU A 213 O ILE A 191 SHEET 1 B 5 LEU A 230 ILE A 232 0 SHEET 2 B 5 ILE A 256 LYS A 262 -1 N ILE A 256 O ILE A 232 SHEET 3 B 5 VAL A 268 ILE A 275 -1 N VAL A 269 O ILE A 261 SHEET 4 B 5 ARG A 174 VAL A 180 -1 O ARG A 174 N ILE A 275 SHEET 5 B 5 GLY A 200 SER A 201 -1 O SER A 201 N TYR A 175
SSBOND 1 CYS A 159 CYS A 300
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 -0.000026 -0.000026 0.00000
SCALE2 0.000000 1.000000 -0.000026 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000