10 20 30 40 50 60 70 80 1FGX - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER TRANSFERASE 29-JUL-00 1FGX
TITLE CRYSTAL STRUCTURE OF THE BOVINE BETA 1,4 TITLE 2 GALACTOSYLTRANSFERASE (B4GALT1) CATALYTIC DOMAIN COMPLEXED TITLE 3 WITH UMP
COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA 1,4 GALACTOSYLTRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: CATALYTIC DOMAIN; COMPND 5 SYNONYM: BETA4GALT1; COMPND 6 EC: 2.4.1.38; COMPND 7 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BOS TAURUS; SOURCE 3 ORGANISM_COMMON: CATTLE; SOURCE 4 ORGANISM_TAXID: 9913; SOURCE 5 ORGAN: LIVER; SOURCE 6 EXPRESSION_SYSTEM: MUS MUSCULUS; SOURCE 7 EXPRESSION_SYSTEM_COMMON: HOUSE MOUSE; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 10090; SOURCE 9 EXPRESSION_SYSTEM_CELL_LINE: NSO; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PEE12
KEYWDS NUCLEOTIDE BINDING PROTEIN, ALPHA BETA ALPHA FOLD, KEYWDS 2 TRANSFERASE
EXPDTA X-RAY DIFFRACTION
AUTHOR L.N.GASTINEL,C.CAMBILLAU,Y.BOURNE
REVDAT 4 24-FEB-09 1FGX 1 VERSN REVDAT 3 30-SEP-03 1FGX 1 DBREF REVDAT 2 20-SEP-00 1FGX 1 JRNL REMARK REVDAT 1 16-AUG-00 1FGX 0
JRNL AUTH L.N.GASTINEL,C.CAMBILLAU,Y.BOURNE JRNL TITL CRYSTAL STRUCTURES OF THE BOVINE JRNL TITL 2 BETA4GALACTOSYLTRANSFERASE CATALYTIC DOMAIN AND JRNL TITL 3 ITS COMPLEX WITH URIDINE DIPHOSPHOGALACTOSE. JRNL REF EMBO J. V. 18 3546 1999 JRNL REFN ISSN 0261-4189 JRNL PMID 10393171 JRNL DOI 10.1093/EMBOJ/18.13.3546
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 0.9 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : CNS REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.28 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 3.0 REMARK 3 NUMBER OF REFLECTIONS : 34096 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.225 REMARK 3 FREE R VALUE : 0.268 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 1026 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4443 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 21 REMARK 3 SOLVENT ATOMS : 145 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 42.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.016 REMARK 3 BOND ANGLES (DEGREES) : 1.90 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: MAXIMUM LIKELIHOOD TARGET USING REMARK 3 AMPLITUDES
REMARK 4 REMARK 4 1FGX COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-AUG-00. REMARK 100 THE RCSB ID CODE IS RCSB011575.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-SEP-98 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.933 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : CUSTOM-MADE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34096 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 29.280 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.0 REMARK 200 DATA REDUNDANCY : 2.800 REMARK 200 R MERGE (I) : 0.05800 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 9.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.55 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.4 REMARK 200 DATA REDUNDANCY IN SHELL : 2.80 REMARK 200 R MERGE FOR SHELL (I) : 0.35000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: DM REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.27 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.54 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 5000, TRIS, MNCL2, LI2SO4, PH REMARK 280 8.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 53.70000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 53.70000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 54.25000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 80.50000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 54.25000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 80.50000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 53.70000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 54.25000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 80.50000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 53.70000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 54.25000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 80.50000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 115 REMARK 465 SER A 116 REMARK 465 ASN A 117 REMARK 465 LEU A 118 REMARK 465 THR A 119 REMARK 465 SER A 120 REMARK 465 ALA A 121 REMARK 465 PRO A 122 REMARK 465 VAL A 123 REMARK 465 PRO A 124 REMARK 465 SER A 125 REMARK 465 THR A 126 REMARK 465 THR A 127 REMARK 465 THR A 128 REMARK 465 ARG A 129 REMARK 465 SER A 130 REMARK 465 GLY B 115 REMARK 465 SER B 116 REMARK 465 ASN B 117 REMARK 465 LEU B 118 REMARK 465 THR B 119 REMARK 465 SER B 120 REMARK 465 ALA B 121 REMARK 465 PRO B 122 REMARK 465 VAL B 123 REMARK 465 PRO B 124 REMARK 465 SER B 125 REMARK 465 THR B 126 REMARK 465 THR B 127 REMARK 465 THR B 128 REMARK 465 ARG B 129
REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS(M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER B 130 OG
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH2 ARG B 328 O HOH B 522 2.06 REMARK 500 N ASP B 361 O HOH B 585 2.09 REMARK 500 N THR A 379 O HOH A 549 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OH TYR A 200 OE1 GLN B 160 6554 1.36 REMARK 500 OE1 GLN A 161 OE1 GLN B 161 6554 1.63 REMARK 500 NE2 GLN A 161 OE1 GLN B 161 6554 1.66 REMARK 500 CD GLN A 161 OE1 GLN B 161 6554 1.82 REMARK 500 O HOH A 553 O HOH B 522 3555 2.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLY A 222 N - CA - C ANGL. DEV. = 22.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 135 177.72 -45.88 REMARK 500 GLU A 136 -73.08 -64.02 REMARK 500 ARG A 189 107.66 -173.03 REMARK 500 GLU A 223 13.95 87.72 REMARK 500 ASP A 260 6.40 -61.78 REMARK 500 TYR A 286 146.97 -173.66 REMARK 500 TRP A 312 -128.90 52.18 REMARK 500 SER A 348 -143.57 35.65 REMARK 500 LYS A 352 88.13 -23.85 REMARK 500 THR B 132 -70.59 -65.98 REMARK 500 ALA B 133 124.85 139.01 REMARK 500 ARG B 189 111.22 -172.01 REMARK 500 GLU B 223 21.21 -159.30 REMARK 500 ASN B 259 111.63 -161.87 REMARK 500 ASP B 260 5.24 -62.97 REMARK 500 TYR B 286 145.81 -176.91 REMARK 500 HIS B 347 -156.48 -89.35 REMARK 500 SER B 348 65.72 0.26 REMARK 500 ARG B 349 74.89 39.32 REMARK 500 ASP B 350 50.49 -105.42 REMARK 500 REMARK 500 REMARK: NULL
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE U5P B 101
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1FR8 RELATED DB: PDB REMARK 900 1FR8 CONTAINS THE SAME PROTEIN COMPLEXED WITH URIDINE REMARK 900 DIPHOSPHOGALACTOSE
DBREF 1FGX A 115 402 UNP P08037 B4GT1_BOVIN 115 402 DBREF 1FGX B 115 402 UNP P08037 B4GT1_BOVIN 115 402
SEQADV 1FGX PRO A 187 UNP P08037 LEU 187 SEE REMARK 999 SEQADV 1FGX PRO B 187 UNP P08037 LEU 187 SEE REMARK 999
SEQRES 1 A 288 GLY SER ASN LEU THR SER ALA PRO VAL PRO SER THR THR SEQRES 2 A 288 THR ARG SER LEU THR ALA CYS PRO GLU GLU SER PRO LEU SEQRES 3 A 288 LEU VAL GLY PRO MET LEU ILE GLU PHE ASN ILE PRO VAL SEQRES 4 A 288 ASP LEU LYS LEU ILE GLU GLN GLN ASN PRO LYS VAL LYS SEQRES 5 A 288 LEU GLY GLY ARG TYR THR PRO MET ASP CYS ILE SER PRO SEQRES 6 A 288 HIS LYS VAL ALA ILE ILE ILE PRO PHE ARG ASN ARG GLN SEQRES 7 A 288 GLU HIS LEU LYS TYR TRP LEU TYR TYR LEU HIS PRO ILE SEQRES 8 A 288 LEU GLN ARG GLN GLN LEU ASP TYR GLY ILE TYR VAL ILE SEQRES 9 A 288 ASN GLN ALA GLY GLU SER MET PHE ASN ARG ALA LYS LEU SEQRES 10 A 288 LEU ASN VAL GLY PHE LYS GLU ALA LEU LYS ASP TYR ASP SEQRES 11 A 288 TYR ASN CYS PHE VAL PHE SER ASP VAL ASP LEU ILE PRO SEQRES 12 A 288 MET ASN ASP HIS ASN THR TYR ARG CYS PHE SER GLN PRO SEQRES 13 A 288 ARG HIS ILE SER VAL ALA MET ASP LYS PHE GLY PHE SER SEQRES 14 A 288 LEU PRO TYR VAL GLN TYR PHE GLY GLY VAL SER ALA LEU SEQRES 15 A 288 SER LYS GLN GLN PHE LEU SER ILE ASN GLY PHE PRO ASN SEQRES 16 A 288 ASN TYR TRP GLY TRP GLY GLY GLU ASP ASP ASP ILE TYR SEQRES 17 A 288 ASN ARG LEU ALA PHE ARG GLY MET SER VAL SER ARG PRO SEQRES 18 A 288 ASN ALA VAL ILE GLY LYS CYS ARG MET ILE ARG HIS SER SEQRES 19 A 288 ARG ASP LYS LYS ASN GLU PRO ASN PRO GLN ARG PHE ASP SEQRES 20 A 288 ARG ILE ALA HIS THR LYS GLU THR MET LEU SER ASP GLY SEQRES 21 A 288 LEU ASN SER LEU THR TYR MET VAL LEU GLU VAL GLN ARG SEQRES 22 A 288 TYR PRO LEU TYR THR LYS ILE THR VAL ASP ILE GLY THR SEQRES 23 A 288 PRO SER SEQRES 1 B 288 GLY SER ASN LEU THR SER ALA PRO VAL PRO SER THR THR SEQRES 2 B 288 THR ARG SER LEU THR ALA CYS PRO GLU GLU SER PRO LEU SEQRES 3 B 288 LEU VAL GLY PRO MET LEU ILE GLU PHE ASN ILE PRO VAL SEQRES 4 B 288 ASP LEU LYS LEU ILE GLU GLN GLN ASN PRO LYS VAL LYS SEQRES 5 B 288 LEU GLY GLY ARG TYR THR PRO MET ASP CYS ILE SER PRO SEQRES 6 B 288 HIS LYS VAL ALA ILE ILE ILE PRO PHE ARG ASN ARG GLN SEQRES 7 B 288 GLU HIS LEU LYS TYR TRP LEU TYR TYR LEU HIS PRO ILE SEQRES 8 B 288 LEU GLN ARG GLN GLN LEU ASP TYR GLY ILE TYR VAL ILE SEQRES 9 B 288 ASN GLN ALA GLY GLU SER MET PHE ASN ARG ALA LYS LEU SEQRES 10 B 288 LEU ASN VAL GLY PHE LYS GLU ALA LEU LYS ASP TYR ASP SEQRES 11 B 288 TYR ASN CYS PHE VAL PHE SER ASP VAL ASP LEU ILE PRO SEQRES 12 B 288 MET ASN ASP HIS ASN THR TYR ARG CYS PHE SER GLN PRO SEQRES 13 B 288 ARG HIS ILE SER VAL ALA MET ASP LYS PHE GLY PHE SER SEQRES 14 B 288 LEU PRO TYR VAL GLN TYR PHE GLY GLY VAL SER ALA LEU SEQRES 15 B 288 SER LYS GLN GLN PHE LEU SER ILE ASN GLY PHE PRO ASN SEQRES 16 B 288 ASN TYR TRP GLY TRP GLY GLY GLU ASP ASP ASP ILE TYR SEQRES 17 B 288 ASN ARG LEU ALA PHE ARG GLY MET SER VAL SER ARG PRO SEQRES 18 B 288 ASN ALA VAL ILE GLY LYS CYS ARG MET ILE ARG HIS SER SEQRES 19 B 288 ARG ASP LYS LYS ASN GLU PRO ASN PRO GLN ARG PHE ASP SEQRES 20 B 288 ARG ILE ALA HIS THR LYS GLU THR MET LEU SER ASP GLY SEQRES 21 B 288 LEU ASN SER LEU THR TYR MET VAL LEU GLU VAL GLN ARG SEQRES 22 B 288 TYR PRO LEU TYR THR LYS ILE THR VAL ASP ILE GLY THR SEQRES 23 B 288 PRO SER
HET U5P B 101 21
HETNAM U5P URIDINE-5'-MONOPHOSPHATE
FORMUL 3 U5P C9 H13 N2 O9 P FORMUL 4 HOH *145(H2 O)
HELIX 1 1 ASP A 154 ASN A 162 1 9 HELIX 2 2 ARG A 191 GLN A 209 1 19 HELIX 3 3 ASN A 227 LEU A 240 1 14 HELIX 4 4 LYS A 279 GLY A 281 5 3 HELIX 5 5 LYS A 298 ILE A 304 1 7 HELIX 6 6 GLY A 316 ARG A 328 1 13 HELIX 7 7 ARG A 362 MET A 370 1 9 HELIX 8 8 GLY A 374 LEU A 378 5 5 HELIX 9 9 ASP B 154 ASN B 162 1 9 HELIX 10 10 ARG B 191 GLN B 210 1 20 HELIX 11 11 ASN B 227 TYR B 243 1 17 HELIX 12 12 LYS B 279 GLY B 281 5 3 HELIX 13 13 LYS B 298 ILE B 304 1 7 HELIX 14 14 GLY B 316 ARG B 328 1 13 HELIX 15 15 ARG B 362 MET B 370 1 9 HELIX 16 16 GLY B 374 LEU B 378 5 5
SHEET 1 A 6 ARG A 271 HIS A 272 0 SHEET 2 A 6 VAL A 293 SER A 297 -1 N ALA A 295 O ARG A 271 SHEET 3 A 6 CYS A 247 SER A 251 -1 O PHE A 248 N LEU A 296 SHEET 4 A 6 LYS A 181 PHE A 188 1 O LYS A 181 N CYS A 247 SHEET 5 A 6 ASP A 212 GLN A 220 1 O ASP A 212 N VAL A 182 SHEET 6 A 6 ARG A 170 TYR A 171 -1 O TYR A 171 N TYR A 213 SHEET 1 B 7 ARG A 271 HIS A 272 0 SHEET 2 B 7 VAL A 293 SER A 297 -1 N ALA A 295 O ARG A 271 SHEET 3 B 7 CYS A 247 SER A 251 -1 O PHE A 248 N LEU A 296 SHEET 4 B 7 LYS A 181 PHE A 188 1 O LYS A 181 N CYS A 247 SHEET 5 B 7 ASP A 212 GLN A 220 1 O ASP A 212 N VAL A 182 SHEET 6 B 7 THR A 392 ASP A 397 1 O THR A 392 N VAL A 217 SHEET 7 B 7 MET A 381 ARG A 387 -1 O MET A 381 N ASP A 397 SHEET 1 C 3 LEU A 255 PRO A 257 0 SHEET 2 C 3 LYS A 341 MET A 344 -1 N ARG A 343 O ILE A 256 SHEET 3 C 3 ALA A 276 MET A 277 1 O ALA A 276 N CYS A 342 SHEET 1 D 6 ARG B 271 HIS B 272 0 SHEET 2 D 6 VAL B 293 SER B 297 -1 N ALA B 295 O ARG B 271 SHEET 3 D 6 CYS B 247 SER B 251 -1 N PHE B 248 O LEU B 296 SHEET 4 D 6 LYS B 181 PHE B 188 1 O LYS B 181 N CYS B 247 SHEET 5 D 6 ASP B 212 GLN B 220 1 O ASP B 212 N VAL B 182 SHEET 6 D 6 ARG B 170 TYR B 171 -1 N TYR B 171 O TYR B 213 SHEET 1 E 7 ARG B 271 HIS B 272 0 SHEET 2 E 7 VAL B 293 SER B 297 -1 N ALA B 295 O ARG B 271 SHEET 3 E 7 CYS B 247 SER B 251 -1 N PHE B 248 O LEU B 296 SHEET 4 E 7 LYS B 181 PHE B 188 1 O LYS B 181 N CYS B 247 SHEET 5 E 7 ASP B 212 GLN B 220 1 O ASP B 212 N VAL B 182 SHEET 6 E 7 THR B 392 ASP B 397 1 O THR B 392 N VAL B 217 SHEET 7 E 7 MET B 381 ARG B 387 -1 N MET B 381 O ASP B 397 SHEET 1 F 3 LEU B 255 PRO B 257 0 SHEET 2 F 3 LYS B 341 MET B 344 -1 N ARG B 343 O ILE B 256 SHEET 3 F 3 ALA B 276 MET B 277 1 O ALA B 276 N CYS B 342
SSBOND 1 CYS A 134 CYS A 176 1555 1555 2.05 SSBOND 2 CYS A 247 CYS A 266 1555 1555 2.06 SSBOND 3 CYS B 134 CYS B 176 1555 1555 2.05 SSBOND 4 CYS B 247 CYS B 266 1555 1555 2.04
SITE 1 AC1 6 ARG B 189 ASN B 190 ARG B 191 MET B 225 SITE 2 AC1 6 PHE B 226 HOH B 615
CRYST1 108.500 161.000 107.400 90.00 90.00 90.00 C 2 2 21 16
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.009217 0.000000 0.000000 0.00000
SCALE2 0.000000 0.006211 0.000000 0.00000
SCALE3 0.000000 0.000000 0.009311 0.00000