10 20 30 40 50 60 70 80 1F9W - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER CONTRACTILE PROTEIN 11-JUL-00 1F9W
TITLE CRYSTAL STRUCTURES OF MUTANTS REVEAL A SIGNALLING PATHWAY TITLE 2 FOR ACTIVATION OF THE KINESIN MOTOR ATPASE
COMPND MOL_ID: 1; COMPND 2 MOLECULE: KINESIN-LIKE PROTEIN KAR3; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: E631A MUTANT MOTOR DOMAIN; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET28; SOURCE 9 OTHER_DETAILS: SACCHAROMYCES CEREVISIAE
KEYWDS KAR3, KINESIN-RELATED PROTEIN, MOTOR PROTEIN, MICROTUBULE KEYWDS 2 BINDING PROTEIN, CONTRACTILE PROTEIN
EXPDTA X-RAY DIFFRACTION
AUTHOR M.YUN,X.ZHANG,C.G.PARK,H.W.PARK,S.A.ENDOW
REVDAT 4 24-FEB-09 1F9W 1 VERSN REVDAT 3 09-MAY-06 1F9W 1 REMARK REVDAT 2 01-APR-03 1F9W 1 JRNL REVDAT 1 13-JUN-01 1F9W 0
JRNL AUTH M.YUN,X.ZHANG,C.G.PARK,H.W.PARK,S.A.ENDOW JRNL TITL A STRUCTURAL PATHWAY FOR ACTIVATION OF THE KINESIN JRNL TITL 2 MOTOR ATPASE. JRNL REF EMBO J. V. 20 2611 2001 JRNL REFN ISSN 0261-4189 JRNL PMID 11387196 JRNL DOI 10.1093/EMBOJ/20.11.2611
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 89.6 REMARK 3 NUMBER OF REFLECTIONS : 18420 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.230 REMARK 3 FREE R VALUE : 0.276 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 1802 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4744 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 56 REMARK 3 SOLVENT ATOMS : 135 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 1.42 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1F9W COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-JUL-00. REMARK 100 THE RCSB ID CODE IS RCSB011423.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-APR-00 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X4A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97950 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20874 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.0 REMARK 200 DATA REDUNDANCY : 12.700 REMARK 200 R MERGE (I) : 0.08500 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 18.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 66.9 REMARK 200 DATA REDUNDANCY IN SHELL : 2.30 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: X-PLOR REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 36.96 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.95 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: HEPES, PEG 2000 ME, ETYLEN GLYCOL, REMARK 280 MAGNESIUM CHLORIDE, SODIUM CHLORIDE, PH 8.0, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 291K
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+3/4 REMARK 290 4555 Y,-X,Z+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 76.78000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 115.17000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 38.39000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 383 REMARK 465 ARG A 384 REMARK 465 ASN A 402 REMARK 465 SER A 403 REMARK 465 LYS A 426 REMARK 465 ILE A 427 REMARK 465 GLN A 428 REMARK 465 ASN A 429 REMARK 465 THR A 430 REMARK 465 ALA A 431 REMARK 465 GLN A 432 REMARK 465 SER A 533 REMARK 465 ASP A 534 REMARK 465 ASN A 535 REMARK 465 ASN A 536 REMARK 465 ASN A 537 REMARK 465 LYS A 538 REMARK 465 GLU A 539 REMARK 465 ASP A 540 REMARK 465 THR A 541 REMARK 465 SER A 542 REMARK 465 ILE A 543 REMARK 465 GLY A 544 REMARK 465 ALA A 588 REMARK 465 SER A 589 REMARK 465 THR A 590 REMARK 465 ALA A 591 REMARK 465 SER A 592 REMARK 465 ASN A 593 REMARK 465 GLU A 594 REMARK 465 ILE A 633 REMARK 465 ASN A 634 REMARK 465 VAL A 635 REMARK 465 SER A 636 REMARK 465 GLN A 637 REMARK 465 VAL A 638 REMARK 465 VAL A 639 REMARK 465 GLY A 640 REMARK 465 ASP A 641 REMARK 465 ARG A 642 REMARK 465 THR A 723 REMARK 465 ARG A 724 REMARK 465 LEU A 725 REMARK 465 VAL A 726 REMARK 465 SER A 727 REMARK 465 ARG A 728 REMARK 465 LYS A 729 REMARK 465 MET B 383 REMARK 465 ARG B 384 REMARK 465 ASN B 402 REMARK 465 SER B 403 REMARK 465 LYS B 426 REMARK 465 ILE B 427 REMARK 465 GLN B 428 REMARK 465 ASN B 429 REMARK 465 THR B 430 REMARK 465 ALA B 431 REMARK 465 GLN B 432 REMARK 465 SER B 533 REMARK 465 ASP B 534 REMARK 465 ASN B 535 REMARK 465 ASN B 536 REMARK 465 ASN B 537 REMARK 465 LYS B 538 REMARK 465 GLU B 539 REMARK 465 ASP B 540 REMARK 465 THR B 541 REMARK 465 SER B 542 REMARK 465 ILE B 543 REMARK 465 GLY B 544 REMARK 465 ALA B 588 REMARK 465 SER B 589 REMARK 465 THR B 590 REMARK 465 ALA B 591 REMARK 465 SER B 592 REMARK 465 ASN B 593 REMARK 465 GLU B 594 REMARK 465 ILE B 633 REMARK 465 ASN B 634 REMARK 465 VAL B 635 REMARK 465 SER B 636 REMARK 465 GLN B 637 REMARK 465 VAL B 638 REMARK 465 VAL B 639 REMARK 465 GLY B 640 REMARK 465 ASP B 641 REMARK 465 ARG B 642 REMARK 465 THR B 723 REMARK 465 ARG B 724 REMARK 465 LEU B 725 REMARK 465 VAL B 726 REMARK 465 SER B 727 REMARK 465 ARG B 728 REMARK 465 LYS B 729
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 392 97.13 -160.85 REMARK 500 ALA A 396 -179.97 -53.01 REMARK 500 LEU A 400 -139.70 -138.37 REMARK 500 THR A 405 -150.12 33.52 REMARK 500 ASP A 415 10.45 -54.69 REMARK 500 ASN A 416 -74.00 -92.93 REMARK 500 SER A 417 -8.19 -59.03 REMARK 500 VAL A 419 -146.36 -77.79 REMARK 500 GLN A 420 95.63 168.11 REMARK 500 SER A 421 -173.90 -69.58 REMARK 500 MET A 422 142.31 176.33 REMARK 500 LYS A 437 78.03 -155.43 REMARK 500 PHE A 438 -167.03 -61.90 REMARK 500 LYS A 440 131.33 145.85 REMARK 500 ASP A 464 31.16 -99.77 REMARK 500 GLN A 475 153.32 -49.07 REMARK 500 THR A 508 -9.60 -50.64 REMARK 500 TRP A 511 -166.51 -54.83 REMARK 500 ASP A 512 134.21 163.91 REMARK 500 GLU A 525 14.21 45.05 REMARK 500 GLU A 554 -83.86 -78.41 REMARK 500 THR A 557 -169.23 -79.39 REMARK 500 THR A 558 113.89 -169.47 REMARK 500 SER A 610 -154.41 -81.37 REMARK 500 ASN A 611 91.57 169.70 REMARK 500 LYS A 613 -71.74 -41.26 REMARK 500 ALA A 616 85.47 -64.97 REMARK 500 ALA A 631 151.59 -44.72 REMARK 500 PRO A 666 -85.12 -51.69 REMARK 500 ASN A 677 20.20 -74.96 REMARK 500 SER A 678 135.87 -177.58 REMARK 500 HIS A 706 15.64 -147.94 REMARK 500 ARG B 392 98.07 -161.36 REMARK 500 ALA B 396 179.72 -52.65 REMARK 500 LEU B 400 -139.45 -138.79 REMARK 500 THR B 405 -150.18 33.55 REMARK 500 ASP B 415 10.96 -55.18 REMARK 500 ASN B 416 -74.24 -93.11 REMARK 500 SER B 417 -8.75 -58.57 REMARK 500 VAL B 419 -146.60 -77.74 REMARK 500 GLN B 420 95.70 167.90 REMARK 500 SER B 421 -172.81 -69.64 REMARK 500 MET B 422 141.90 175.68 REMARK 500 LYS B 437 77.57 -155.51 REMARK 500 PHE B 438 -166.45 -61.27 REMARK 500 LYS B 440 132.06 146.16 REMARK 500 ASP B 464 30.52 -99.88 REMARK 500 GLN B 475 153.89 -49.97 REMARK 500 THR B 508 -9.78 -50.42 REMARK 500 TRP B 511 -166.62 -54.94 REMARK 500 ASP B 512 134.44 163.65 REMARK 500 GLU B 525 14.14 44.69 REMARK 500 GLU B 554 -83.55 -77.85 REMARK 500 THR B 557 -169.22 -79.42 REMARK 500 THR B 558 114.24 -169.38 REMARK 500 SER B 610 -154.16 -81.88 REMARK 500 ASN B 611 91.91 169.42 REMARK 500 LYS B 613 -71.43 -41.61 REMARK 500 ALA B 616 85.44 -65.02 REMARK 500 ALA B 631 151.55 -44.30 REMARK 500 PRO B 666 -85.18 -51.88 REMARK 500 ASN B 677 20.82 -75.06 REMARK 500 SER B 678 136.05 -178.60 REMARK 500 HIS B 706 15.31 -147.64 REMARK 500 REMARK 500 REMARK: NULL
REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1020 DISTANCE = 5.07 ANGSTROMS REMARK 525 HOH B1029 DISTANCE = 6.38 ANGSTROMS REMARK 525 HOH A1047 DISTANCE = 5.70 ANGSTROMS REMARK 525 HOH A1052 DISTANCE = 10.62 ANGSTROMS REMARK 525 HOH B1045 DISTANCE = 10.78 ANGSTROMS REMARK 525 HOH A1068 DISTANCE = 14.14 ANGSTROMS REMARK 525 HOH A1070 DISTANCE = 9.46 ANGSTROMS REMARK 525 HOH B1057 DISTANCE = 5.07 ANGSTROMS REMARK 525 HOH A1072 DISTANCE = 5.34 ANGSTROMS REMARK 525 HOH B1064 DISTANCE = 5.42 ANGSTROMS REMARK 525 HOH A1109 DISTANCE = 5.31 ANGSTROMS REMARK 525 HOH A1115 DISTANCE = 7.59 ANGSTROMS REMARK 525 HOH B1110 DISTANCE = 5.00 ANGSTROMS REMARK 525 HOH A1120 DISTANCE = 5.23 ANGSTROMS REMARK 525 HOH B1121 DISTANCE = 5.34 ANGSTROMS REMARK 525 HOH B1123 DISTANCE = 6.40 ANGSTROMS REMARK 525 HOH B1124 DISTANCE = 5.10 ANGSTROMS REMARK 525 HOH A1132 DISTANCE = 7.01 ANGSTROMS REMARK 525 HOH A1139 DISTANCE = 8.32 ANGSTROMS REMARK 525 HOH B1129 DISTANCE = 6.30 ANGSTROMS REMARK 525 HOH A1140 DISTANCE = 6.12 ANGSTROMS REMARK 525 HOH B1145 DISTANCE = 6.25 ANGSTROMS REMARK 525 HOH B1157 DISTANCE = 6.69 ANGSTROMS REMARK 525 HOH A1174 DISTANCE = 5.13 ANGSTROMS REMARK 525 HOH B1165 DISTANCE = 6.00 ANGSTROMS REMARK 525 HOH A1201 DISTANCE = 8.60 ANGSTROMS REMARK 525 HOH A1206 DISTANCE = 6.77 ANGSTROMS REMARK 525 HOH B1202 DISTANCE = 6.58 ANGSTROMS REMARK 525 HOH B1214 DISTANCE = 5.53 ANGSTROMS
REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 996 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 481 OG1 REMARK 620 2 ADP A 998 O2B 67.4 REMARK 620 3 ADP A 998 O3B 117.5 54.4 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 997 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ADP B 999 O2B REMARK 620 2 ADP B 999 O3B 53.9 REMARK 620 3 THR B 481 OG1 68.3 118.1 REMARK 620 N 1 2
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 996 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 997 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP A 998 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP B 999
DBREF 1F9W A 383 729 UNP P17119 KAR3_YEAST 383 729 DBREF 1F9W B 383 729 UNP P17119 KAR3_YEAST 383 729
SEQADV 1F9W MET A 383 UNP P17119 LYS 383 ENGINEERED SEQADV 1F9W ALA A 631 UNP P17119 GLU 631 ENGINEERED SEQADV 1F9W MET B 383 UNP P17119 LYS 383 ENGINEERED SEQADV 1F9W ALA B 631 UNP P17119 GLU 631 ENGINEERED
SEQRES 1 A 347 MET ARG GLY ASN ILE ARG VAL TYR CYS ARG ILE ARG PRO SEQRES 2 A 347 ALA LEU LYS ASN LEU GLU ASN SER ASP THR SER LEU ILE SEQRES 3 A 347 ASN VAL ASN GLU PHE ASP ASP ASN SER GLY VAL GLN SER SEQRES 4 A 347 MET GLU VAL THR LYS ILE GLN ASN THR ALA GLN VAL HIS SEQRES 5 A 347 GLU PHE LYS PHE ASP LYS ILE PHE ASP GLN GLN ASP THR SEQRES 6 A 347 ASN VAL ASP VAL PHE LYS GLU VAL GLY GLN LEU VAL GLN SEQRES 7 A 347 SER SER LEU ASP GLY TYR ASN VAL CYS ILE PHE ALA TYR SEQRES 8 A 347 GLY GLN THR GLY SER GLY LYS THR PHE THR MET LEU ASN SEQRES 9 A 347 PRO GLY ASP GLY ILE ILE PRO SER THR ILE SER HIS ILE SEQRES 10 A 347 PHE ASN TRP ILE ASN LYS LEU LYS THR LYS GLY TRP ASP SEQRES 11 A 347 TYR LYS VAL ASN CYS GLU PHE ILE GLU ILE TYR ASN GLU SEQRES 12 A 347 ASN ILE VAL ASP LEU LEU ARG SER ASP ASN ASN ASN LYS SEQRES 13 A 347 GLU ASP THR SER ILE GLY LEU LYS HIS GLU ILE ARG HIS SEQRES 14 A 347 ASP GLN GLU THR LYS THR THR THR ILE THR ASN VAL THR SEQRES 15 A 347 SER CYS LYS LEU GLU SER GLU GLU MET VAL GLU ILE ILE SEQRES 16 A 347 LEU LYS LYS ALA ASN LYS LEU ARG SER THR ALA SER THR SEQRES 17 A 347 ALA SER ASN GLU HIS SER SER ARG SER HIS SER ILE PHE SEQRES 18 A 347 ILE ILE HIS LEU SER GLY SER ASN ALA LYS THR GLY ALA SEQRES 19 A 347 HIS SER TYR GLY THR LEU ASN LEU VAL ASP LEU ALA GLY SEQRES 20 A 347 SER ALA ARG ILE ASN VAL SER GLN VAL VAL GLY ASP ARG SEQRES 21 A 347 LEU ARG GLU THR GLN ASN ILE ASN LYS SER LEU SER CYS SEQRES 22 A 347 LEU GLY ASP VAL ILE HIS ALA LEU GLY GLN PRO ASP SER SEQRES 23 A 347 THR LYS ARG HIS ILE PRO PHE ARG ASN SER LYS LEU THR SEQRES 24 A 347 TYR LEU LEU GLN TYR SER LEU THR GLY ASP SER LYS THR SEQRES 25 A 347 LEU MET PHE VAL ASN ILE SER PRO SER SER SER HIS ILE SEQRES 26 A 347 ASN GLU THR LEU ASN SER LEU ARG PHE ALA SER LYS VAL SEQRES 27 A 347 ASN SER THR ARG LEU VAL SER ARG LYS SEQRES 1 B 347 MET ARG GLY ASN ILE ARG VAL TYR CYS ARG ILE ARG PRO SEQRES 2 B 347 ALA LEU LYS ASN LEU GLU ASN SER ASP THR SER LEU ILE SEQRES 3 B 347 ASN VAL ASN GLU PHE ASP ASP ASN SER GLY VAL GLN SER SEQRES 4 B 347 MET GLU VAL THR LYS ILE GLN ASN THR ALA GLN VAL HIS SEQRES 5 B 347 GLU PHE LYS PHE ASP LYS ILE PHE ASP GLN GLN ASP THR SEQRES 6 B 347 ASN VAL ASP VAL PHE LYS GLU VAL GLY GLN LEU VAL GLN SEQRES 7 B 347 SER SER LEU ASP GLY TYR ASN VAL CYS ILE PHE ALA TYR SEQRES 8 B 347 GLY GLN THR GLY SER GLY LYS THR PHE THR MET LEU ASN SEQRES 9 B 347 PRO GLY ASP GLY ILE ILE PRO SER THR ILE SER HIS ILE SEQRES 10 B 347 PHE ASN TRP ILE ASN LYS LEU LYS THR LYS GLY TRP ASP SEQRES 11 B 347 TYR LYS VAL ASN CYS GLU PHE ILE GLU ILE TYR ASN GLU SEQRES 12 B 347 ASN ILE VAL ASP LEU LEU ARG SER ASP ASN ASN ASN LYS SEQRES 13 B 347 GLU ASP THR SER ILE GLY LEU LYS HIS GLU ILE ARG HIS SEQRES 14 B 347 ASP GLN GLU THR LYS THR THR THR ILE THR ASN VAL THR SEQRES 15 B 347 SER CYS LYS LEU GLU SER GLU GLU MET VAL GLU ILE ILE SEQRES 16 B 347 LEU LYS LYS ALA ASN LYS LEU ARG SER THR ALA SER THR SEQRES 17 B 347 ALA SER ASN GLU HIS SER SER ARG SER HIS SER ILE PHE SEQRES 18 B 347 ILE ILE HIS LEU SER GLY SER ASN ALA LYS THR GLY ALA SEQRES 19 B 347 HIS SER TYR GLY THR LEU ASN LEU VAL ASP LEU ALA GLY SEQRES 20 B 347 SER ALA ARG ILE ASN VAL SER GLN VAL VAL GLY ASP ARG SEQRES 21 B 347 LEU ARG GLU THR GLN ASN ILE ASN LYS SER LEU SER CYS SEQRES 22 B 347 LEU GLY ASP VAL ILE HIS ALA LEU GLY GLN PRO ASP SER SEQRES 23 B 347 THR LYS ARG HIS ILE PRO PHE ARG ASN SER LYS LEU THR SEQRES 24 B 347 TYR LEU LEU GLN TYR SER LEU THR GLY ASP SER LYS THR SEQRES 25 B 347 LEU MET PHE VAL ASN ILE SER PRO SER SER SER HIS ILE SEQRES 26 B 347 ASN GLU THR LEU ASN SER LEU ARG PHE ALA SER LYS VAL SEQRES 27 B 347 ASN SER THR ARG LEU VAL SER ARG LYS
HET MG A 996 1 HET MG B 997 1 HET ADP A 998 27 HET ADP B 999 27
HETNAM MG MAGNESIUM ION HETNAM ADP ADENOSINE-5'-DIPHOSPHATE
FORMUL 3 MG 2(MG 2+) FORMUL 5 ADP 2(C10 H15 N5 O10 P2) FORMUL 7 HOH *135(H2 O)
HELIX 1 1 THR A 447 GLN A 460 1 14 HELIX 2 2 SER A 461 GLY A 465 5 5 HELIX 3 3 GLY A 479 ASN A 486 1 8 HELIX 4 4 GLY A 490 THR A 508 1 19 HELIX 5 5 SER A 570 SER A 586 1 17 HELIX 6 6 HIS A 595 SER A 599 5 5 HELIX 7 7 ARG A 644 GLY A 664 1 21 HELIX 8 8 SER A 678 GLN A 685 1 8 HELIX 9 9 TYR A 686 THR A 689 5 4 HELIX 10 10 SER A 703 SER A 705 5 3 HELIX 11 11 HIS A 706 ASN A 721 1 16 HELIX 12 12 THR B 447 GLN B 460 1 14 HELIX 13 13 SER B 461 GLY B 465 5 5 HELIX 14 14 GLY B 479 ASN B 486 1 8 HELIX 15 15 GLY B 490 THR B 508 1 19 HELIX 16 16 SER B 570 SER B 586 1 17 HELIX 17 17 HIS B 595 SER B 599 5 5 HELIX 18 18 ARG B 644 GLY B 664 1 21 HELIX 19 19 SER B 678 GLN B 685 1 8 HELIX 20 20 TYR B 686 THR B 689 5 4 HELIX 21 21 SER B 703 SER B 705 5 3 HELIX 22 22 HIS B 706 ASN B 721 1 16
SHEET 1 A 7 ILE A 387 ILE A 393 0 SHEET 2 A 7 SER A 692 ILE A 700 1 O THR A 694 N ARG A 388 SHEET 3 A 7 ASN A 467 TYR A 473 1 O ASN A 467 N LYS A 693 SHEET 4 A 7 SER A 618 ASP A 626 1 O THR A 621 N VAL A 468 SHEET 5 A 7 HIS A 600 GLY A 609 -1 O SER A 601 N ASP A 626 SHEET 6 A 7 LYS A 514 TYR A 523 -1 O LYS A 514 N SER A 608 SHEET 7 A 7 ASN A 526 VAL A 528 -1 O ASN A 526 N TYR A 523 SHEET 1 B 7 ILE A 387 ILE A 393 0 SHEET 2 B 7 SER A 692 ILE A 700 1 O THR A 694 N ARG A 388 SHEET 3 B 7 ASN A 467 TYR A 473 1 O ASN A 467 N LYS A 693 SHEET 4 B 7 SER A 618 ASP A 626 1 O THR A 621 N VAL A 468 SHEET 5 B 7 HIS A 600 GLY A 609 -1 O SER A 601 N ASP A 626 SHEET 6 B 7 LYS A 514 TYR A 523 -1 O LYS A 514 N SER A 608 SHEET 7 B 7 CYS A 566 LYS A 567 -1 O CYS A 566 N CYS A 517 SHEET 1 C 2 SER A 421 VAL A 424 0 SHEET 2 C 2 HIS A 434 LYS A 437 -1 N HIS A 434 O VAL A 424 SHEET 1 D 2 ILE A 549 ASP A 552 0 SHEET 2 D 2 THR A 557 ILE A 560 -1 O THR A 557 N ASP A 552 SHEET 1 E 7 ILE B 387 ILE B 393 0 SHEET 2 E 7 SER B 692 ILE B 700 1 O THR B 694 N ARG B 388 SHEET 3 E 7 ASN B 467 TYR B 473 1 O ASN B 467 N LYS B 693 SHEET 4 E 7 SER B 618 ASP B 626 1 O THR B 621 N VAL B 468 SHEET 5 E 7 HIS B 600 GLY B 609 -1 O SER B 601 N ASP B 626 SHEET 6 E 7 LYS B 514 TYR B 523 -1 O LYS B 514 N SER B 608 SHEET 7 E 7 ASN B 526 VAL B 528 -1 O ASN B 526 N TYR B 523 SHEET 1 F 7 ILE B 387 ILE B 393 0 SHEET 2 F 7 SER B 692 ILE B 700 1 O THR B 694 N ARG B 388 SHEET 3 F 7 ASN B 467 TYR B 473 1 O ASN B 467 N LYS B 693 SHEET 4 F 7 SER B 618 ASP B 626 1 O THR B 621 N VAL B 468 SHEET 5 F 7 HIS B 600 GLY B 609 -1 O SER B 601 N ASP B 626 SHEET 6 F 7 LYS B 514 TYR B 523 -1 O LYS B 514 N SER B 608 SHEET 7 F 7 CYS B 566 LYS B 567 -1 O CYS B 566 N CYS B 517 SHEET 1 G 2 SER B 421 VAL B 424 0 SHEET 2 G 2 HIS B 434 LYS B 437 -1 N HIS B 434 O VAL B 424 SHEET 1 H 2 ILE B 549 ASP B 552 0 SHEET 2 H 2 THR B 557 ILE B 560 -1 O THR B 557 N ASP B 552
LINK MG MG A 996 OG1 THR A 481 1555 1555 2.44 LINK MG MG A 996 O2B ADP A 998 1555 1555 2.63 LINK MG MG A 996 O3B ADP A 998 1555 1555 3.00 LINK MG MG B 997 O2B ADP B 999 1555 1555 2.64 LINK MG MG B 997 O3B ADP B 999 1555 1555 3.02 LINK MG MG B 997 OG1 THR B 481 1555 1555 2.44
SITE 1 AC1 2 THR A 481 ADP A 998 SITE 1 AC2 2 THR B 481 ADP B 999 SITE 1 AC3 13 ARG A 392 ARG A 394 PRO A 395 GLN A 475 SITE 2 AC3 13 THR A 476 GLY A 477 SER A 478 GLY A 479 SITE 3 AC3 13 LYS A 480 THR A 481 PHE A 482 MG A 996 SITE 4 AC3 13 HOH A1003 SITE 1 AC4 13 ARG B 392 ARG B 394 PRO B 395 GLN B 475 SITE 2 AC4 13 THR B 476 GLY B 477 SER B 478 GLY B 479 SITE 3 AC4 13 LYS B 480 THR B 481 PHE B 482 MG B 997 SITE 4 AC4 13 HOH B1050
CRYST1 62.890 62.890 153.560 90.00 90.00 90.00 P 43 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.015901 0.000000 0.000000 0.00000
SCALE2 0.000000 0.015901 0.000000 0.00000
SCALE3 0.000000 0.000000 0.006512 0.00000