10 20 30 40 50 60 70 80 1F67 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER OXIDOREDUCTASE 20-JUN-00 1F67
TITLE MOLECULAR MODELING OF HUMAN TYPE 10 17BETA-HYDROXYSTEROID TITLE 2 DEHYDROGENASE
COMPND MOL_ID: 1; COMPND 2 MOLECULE: 3-HYDROXYACYL-COA DEHYDROGENASE TYPE II; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: TYPE 10 17BETA-HYDROXYSTEROID DEHYDROGENASE; COMPND 5 EC: 1.1.1.35
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN
KEYWDS SDR, 17BETA-HYDROXYSTEROID DEHYDROGENASE, ERAB
EXPDTA THEORETICAL MODEL
AUTHOR E.NORDLING,U.C.OPPERMANN,H.JORNVALL,B.PERSSON
REVDAT 1 26-SEP-01 1F67 0
JRNL AUTH E.NORDLING,U.C.OPPERMANN,H.JORNVALL,B.PERSSON JRNL TITL HUMAN TYPE 10 17 BETA-HYDROXYSTEROID JRNL TITL 2 DEHYDROGENASE: MOLECULAR MODELLING AND SUBSTRATE JRNL TITL 3 DOCKING. JRNL REF J.MOL.GRAPH.MODEL. V. 19 514 2001 JRNL REFN US ISSN 1093-3263
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NULL REMARK 3 AUTHORS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: TEMPLATE STRUCURE IS 1FMC
REMARK 4 REMARK 4 1F67 COMPLIES WITH FORMAT V. 2.3, 09-JULY-1998
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-JUN-2000. REMARK 100 THE RCSB ID CODE IS RCSB011292.
REMARK 220 REMARK 220 EXPERIMENTAL DETAILS REMARK 220 EXPERIMENT TYPE : THEORETICAL MODELLING REMARK 220 REMARK 220 REMARK: THIS STRUCTURE IS DETERMINED USING HOMOLOGY MODELLING REMARK 220 TECHNIQUES
REMARK 225 REMARK 225 THEORETICAL MODEL REMARK 225 THE COORDINATES IN THIS ENTRY REPRESENT A MODEL STRUCTURE. REMARK 225 PROTEIN DATA BANK CONVENTIONS REQUIRE THAT CRYST1 AND REMARK 225 SCALE RECORDS BE INCLUDED, BUT THE VALUES ON THESE REMARK 225 RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI REMARK 500 CG1 VAL A 65 AN6 NAH 377 2.08 REMARK 500 OD1 ASP A 41 N PRO A 43 2.09 REMARK 500 CB VAL A 65 AN6 NAH 377 2.10 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),F6.3) REMARK 500 REMARK 500 EXPECTED VALUES: ENGH AND HUBER, 1991 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 TYR A 101 CD1 TYR A 101 CE1 0.058 REMARK 500 TYR A 101 CE2 TYR A 101 CD2 0.058 REMARK 500 TYR A 168 CD1 TYR A 168 CE1 0.058 REMARK 500 TYR A 168 CE2 TYR A 168 CD2 0.058 REMARK 500 TYR A 233 CD1 TYR A 233 CE1 0.058 REMARK 500 TYR A 233 CE2 TYR A 233 CD2 0.058 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES: ENGH AND HUBER, 1991 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 261 C - N - CD ANGL. DEV. =-14.9 DEGREES REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 139 164.22 59.47 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 LEU A 209 PRO A 210 -149.55
DBREF 1F67 A 1 261 UNP Q99714 HCD2_HUMAN 1 261
SEQRES 1 A 261 MET ALA ALA ALA CYS ARG SER VAL LYS GLY LEU VAL ALA SEQRES 2 A 261 VAL ILE THR GLY GLY ALA SER GLY LEU GLY LEU ALA THR SEQRES 3 A 261 ALA GLU ARG LEU VAL GLY GLN GLY ALA SER ALA VAL LEU SEQRES 4 A 261 LEU ASP LEU PRO ASN SER GLY GLY GLU ALA GLN ALA LYS SEQRES 5 A 261 LYS LEU GLY ASN ASN CYS VAL PHE ALA PRO ALA ASP VAL SEQRES 6 A 261 THR SER GLU LYS ASP VAL GLN THR ALA LEU ALA LEU ALA SEQRES 7 A 261 LYS GLY LYS PHE GLY ARG VAL ASP VAL ALA VAL ASN CYS SEQRES 8 A 261 ALA GLY ILE ALA VAL ALA SER LYS THR TYR ASN LEU LYS SEQRES 9 A 261 LYS GLY GLN THR HIS THR LEU GLU ASP PHE GLN ARG VAL SEQRES 10 A 261 LEU ASP VAL ASN LEU MET GLY THR PHE ASN VAL ILE ARG SEQRES 11 A 261 LEU VAL ALA GLY GLU MET GLY GLN ASN GLU PRO ASP GLN SEQRES 12 A 261 GLY GLY GLN ARG GLY VAL ILE ILE ASN THR ALA SER VAL SEQRES 13 A 261 ALA ALA PHE GLU GLY GLN VAL GLY GLN ALA ALA TYR SER SEQRES 14 A 261 ALA SER LYS GLY GLY ILE VAL GLY MET THR LEU PRO ILE SEQRES 15 A 261 ALA ARG ASP LEU ALA PRO ILE GLY ILE ARG VAL MET THR SEQRES 16 A 261 ILE ALA PRO GLY LEU PHE GLY THR PRO LEU LEU THR SER SEQRES 17 A 261 LEU PRO GLU LYS VAL CYS ASN PHE LEU ALA SER GLN VAL SEQRES 18 A 261 PRO PHE PRO SER ARG LEU GLY ASP PRO ALA GLU TYR ALA SEQRES 19 A 261 HIS LEU VAL GLN ALA ILE ILE GLU ASN PRO PHE LEU ASN SEQRES 20 A 261 GLY GLU VAL ILE ARG LEU ASP GLY ALA ILE ARG MET GLN SEQRES 21 A 261 PRO
HET NAH 377 70
HETNAM NAH NICOTINAMIDE-ADENINE-DINUCLEOTIDE
FORMUL 2 NAH C21 H27 N7 O14 P2
HELIX 1 1 ALA A 3 SER A 7 5 5 HELIX 2 2 GLY A 21 GLN A 33 1 13 HELIX 3 3 PRO A 43 GLY A 55 1 13 HELIX 4 4 SER A 67 GLY A 83 1 17 HELIX 5 5 THR A 110 LEU A 122 1 13 HELIX 6 6 LEU A 122 ASN A 139 1 18 HELIX 7 7 SER A 155 PHE A 159 5 5 HELIX 8 8 GLN A 165 LEU A 186 1 22 HELIX 9 9 THR A 203 SER A 208 1 6 HELIX 10 10 GLU A 211 GLN A 220 1 10 HELIX 11 11 ASP A 229 GLU A 242 1 14
SHEET 1 A 6 SER A 36 LEU A 40 0 SHEET 2 A 6 VAL A 12 THR A 16 1 N ALA A 13 O SER A 36 SHEET 3 A 6 VAL A 87 ASN A 90 1 N VAL A 87 O VAL A 12 SHEET 4 A 6 VAL A 149 THR A 153 1 O VAL A 149 N ALA A 88 SHEET 5 A 6 ARG A 192 PRO A 198 1 O ARG A 192 N ILE A 150 SHEET 6 A 6 ILE A 251 GLY A 255 1 O ILE A 251 N THR A 195
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000