10 20 30 40 50 60 70 80 1F43 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER TRANSCRIPTION 07-JUN-00 1F43
TITLE SOLUTION STRUCTURE OF THE MATA1 HOMEODOMAIN
COMPND MOL_ID: 1; COMPND 2 MOLECULE: MATING-TYPE PROTEIN A-1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: HOMEODOMAIN, C-TERMINAL DOMAIN (66-126); COMPND 5 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PCW/AL66-126
KEYWDS HOMEODOMAIN, HELIX-TURN-HELIX, TRANSCRIPTION
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR J.S.ANDERSON,M.FORMAN,S.MODLESKI,F.W.DAHLQUIST,S.M.BAXTER
REVDAT 4 24-FEB-09 1F43 1 VERSN REVDAT 3 01-APR-03 1F43 1 JRNL REVDAT 2 27-SEP-00 1F43 1 JRNL REVDAT 1 26-JUL-00 1F43 0
JRNL AUTH J.S.ANDERSON,M.D.FORMAN,S.MODLESKI,F.W.DAHLQUIST, JRNL AUTH 2 S.M.BAXTER JRNL TITL COOPERATIVE ORDERING IN HOMEODOMAIN-DNA JRNL TITL 2 RECOGNITION: SOLUTION STRUCTURE AND DYNAMICS OF JRNL TITL 3 THE MATA1 HOMEODOMAIN. JRNL REF BIOCHEMISTRY V. 39 10045 2000 JRNL REFN ISSN 0006-2960 JRNL PMID 10955992 JRNL DOI 10.1021/BI000677Z
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.851 REMARK 3 AUTHORS : A. BRUNGER REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE STRUCTURE IS BASED ON A TOTAL OF REMARK 3 1178 NOE-DERIVED DISTANCE CONSTRAINTS, 38 DIHEDRAL ANGLE REMARK 3 CONSTRAINTS, AND 42 HYDROGEN BOND RESTRAINTS.
REMARK 4 REMARK 4 1F43 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-JUN-00. REMARK 100 THE RCSB ID CODE IS RCSB011217.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298; 298; 298 REMARK 210 PH : 4.5; 4.5; 4.5 REMARK 210 IONIC STRENGTH : 100 MM KCL; 100 MM KCL; 100 REMARK 210 MM KCL REMARK 210 PRESSURE : AMBIENT; AMBIENT; AMBIENT REMARK 210 SAMPLE CONTENTS : 1.5 MM MATA1(66-126) U-15N, REMARK 210 13C 25 MM DEUTERATED ACETATE, REMARK 210 PH 4.5, 100 MM KCL, 0.01% REMARK 210 NAN3; 90% H2O, 10% D2O; 1.5 MM REMARK 210 MATA1 (66-126) U-15N 25 MM REMARK 210 DEUTERATED ACETATE, PH 4.5, REMARK 210 100 MM KCL, 0.01% NAN3; 90% REMARK 210 H2O, 10% D2O; 1.5 MM MATA1 REMARK 210 (66-126) 25 MM DEUTERATED REMARK 210 ACETATE, PH 4.5, 100 MM KCL, REMARK 210 0.01% NAN3; 90% H2O, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY, HNHA, REMARK 210 HNCA-J, 2D NOESY, DQF-COSY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ, 500 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 2.3, FELIX 970 REMARK 210 METHOD USED : DISTANCE GEOMETRY AND REMARK 210 SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 17 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LYS A -2 104.70 61.29 REMARK 500 1 GLU A -1 -74.06 -97.48 REMARK 500 1 LYS A 0 103.52 -165.47 REMARK 500 1 SER A 1 90.67 -162.49 REMARK 500 1 SER A 6 -78.59 64.71 REMARK 500 1 SER A 9 -177.49 -54.31 REMARK 500 1 LYS A 23 -147.57 -170.16 REMARK 500 1 GLN A 24 -51.96 -140.41 REMARK 500 1 ILE A 40 -163.91 -109.97 REMARK 500 1 VAL A 45 -32.61 -36.67 REMARK 500 1 ARG A 53 33.20 -179.84 REMARK 500 1 MET A 54 88.33 -52.92 REMARK 500 2 SER A 1 -61.99 -175.78 REMARK 500 2 SER A 6 -80.92 -67.71 REMARK 500 2 SER A 7 -167.04 47.42 REMARK 500 2 SER A 9 -176.68 -55.15 REMARK 500 2 LYS A 23 -145.79 -169.95 REMARK 500 2 GLN A 24 -50.04 -144.59 REMARK 500 2 ILE A 40 -164.04 -112.55 REMARK 500 2 VAL A 45 -32.82 -36.32 REMARK 500 2 ARG A 53 31.27 -177.50 REMARK 500 2 MET A 54 86.25 -53.54 REMARK 500 3 SER A 1 161.67 58.97 REMARK 500 3 PRO A 2 84.16 -57.96 REMARK 500 3 LYS A 3 146.88 -170.19 REMARK 500 3 LYS A 5 -58.13 -141.46 REMARK 500 3 SER A 7 -69.15 -123.62 REMARK 500 3 SER A 9 -175.45 -54.97 REMARK 500 3 LYS A 23 -147.87 -163.33 REMARK 500 3 GLN A 24 -49.43 -139.05 REMARK 500 3 ILE A 40 -162.59 -109.78 REMARK 500 3 VAL A 45 -33.25 -36.27 REMARK 500 3 ARG A 53 32.35 -170.57 REMARK 500 3 MET A 54 84.15 -53.51 REMARK 500 3 SER A 56 -169.34 -125.80 REMARK 500 4 LYS A -2 36.25 -98.60 REMARK 500 4 GLU A -1 -169.15 -169.78 REMARK 500 4 LYS A 0 99.49 61.84 REMARK 500 4 LYS A 3 126.42 63.35 REMARK 500 4 SER A 9 -176.90 -53.64 REMARK 500 4 LYS A 23 -138.93 -163.19 REMARK 500 4 GLN A 24 -46.50 -147.90 REMARK 500 4 ILE A 40 -163.26 -107.05 REMARK 500 4 VAL A 45 -33.89 -36.25 REMARK 500 4 ARG A 53 36.37 -178.14 REMARK 500 4 MET A 54 69.10 -61.87 REMARK 500 5 LYS A -2 -78.97 63.50 REMARK 500 5 LYS A 0 59.82 -108.95 REMARK 500 5 SER A 7 161.83 61.83 REMARK 500 5 SER A 9 -176.74 -54.21 REMARK 500 5 LYS A 23 -150.35 -164.48 REMARK 500 5 GLN A 24 -46.48 -141.68 REMARK 500 5 ILE A 40 -167.92 -112.57 REMARK 500 5 VAL A 45 -33.03 -36.62 REMARK 500 5 ARG A 53 32.73 -178.18 REMARK 500 5 MET A 54 89.17 -51.23 REMARK 500 5 SER A 56 -71.19 -141.53 REMARK 500 6 LYS A 0 38.67 -97.92 REMARK 500 6 LYS A 3 -76.97 -66.11 REMARK 500 6 SER A 7 96.62 -166.66 REMARK 500 6 SER A 9 -174.77 -60.45 REMARK 500 6 LYS A 23 -144.59 -164.23 REMARK 500 6 GLN A 24 -48.47 -145.45 REMARK 500 6 ILE A 40 -163.77 -110.08 REMARK 500 6 VAL A 45 -33.69 -35.94 REMARK 500 6 MET A 54 84.79 -54.84 REMARK 500 7 LYS A 0 135.33 63.22 REMARK 500 7 LYS A 3 -45.37 -169.25 REMARK 500 7 SER A 6 93.75 61.36 REMARK 500 7 SER A 7 -175.23 58.67 REMARK 500 7 SER A 9 -177.02 -54.68 REMARK 500 7 LYS A 23 -144.75 -168.89 REMARK 500 7 GLN A 24 -50.25 -144.58 REMARK 500 7 ILE A 40 -161.91 -113.10 REMARK 500 7 VAL A 45 -33.16 -36.20 REMARK 500 7 ARG A 53 32.27 -170.38 REMARK 500 7 MET A 54 85.77 -51.64 REMARK 500 8 GLU A -1 -171.30 58.96 REMARK 500 8 SER A 1 -57.14 -177.38 REMARK 500 8 LYS A 3 78.82 -167.36 REMARK 500 8 SER A 9 -175.48 -54.72 REMARK 500 8 LYS A 23 -139.58 -166.27 REMARK 500 8 GLN A 24 -46.88 -148.27 REMARK 500 8 ILE A 40 -165.43 -110.40 REMARK 500 8 VAL A 45 -33.39 -35.89 REMARK 500 8 MET A 54 83.10 -57.21 REMARK 500 9 LYS A -2 -45.59 -139.07 REMARK 500 9 GLU A -1 -91.09 44.67 REMARK 500 9 SER A 1 -61.90 -178.37 REMARK 500 9 PRO A 2 178.25 -57.45 REMARK 500 9 LYS A 3 94.69 63.19 REMARK 500 9 SER A 9 -175.23 -52.17 REMARK 500 9 LYS A 23 -143.10 -162.37 REMARK 500 9 GLN A 24 -44.82 -147.07 REMARK 500 9 ILE A 40 -165.36 -109.55 REMARK 500 9 VAL A 45 -33.23 -36.53 REMARK 500 9 ARG A 53 30.63 -176.27 REMARK 500 9 MET A 54 88.12 -51.32 REMARK 500 10 LYS A 5 -163.78 61.91 REMARK 500 10 SER A 6 -79.76 70.67 REMARK 500 10 SER A 7 91.57 48.83 REMARK 500 10 SER A 9 -175.70 -53.14 REMARK 500 10 LYS A 23 -155.30 -160.64 REMARK 500 10 GLN A 24 -47.99 -139.72 REMARK 500 10 ILE A 40 -164.77 -110.27 REMARK 500 10 VAL A 45 -35.03 -35.73 REMARK 500 10 ARG A 53 35.43 -178.15 REMARK 500 10 MET A 54 79.56 -57.89 REMARK 500 11 LYS A -2 -66.06 -163.14 REMARK 500 11 PRO A 2 -74.58 -60.34 REMARK 500 11 SER A 9 -176.61 -50.95 REMARK 500 11 LYS A 23 -145.61 -161.48 REMARK 500 11 GLN A 24 -50.54 -141.12 REMARK 500 11 ILE A 40 -163.37 -109.14 REMARK 500 11 MET A 54 89.00 -49.49 REMARK 500 12 GLU A -1 59.35 -150.21 REMARK 500 12 PRO A 2 -169.51 -68.56 REMARK 500 12 LYS A 5 -80.25 63.03 REMARK 500 12 SER A 6 -179.71 62.01 REMARK 500 12 SER A 9 -175.78 -54.14 REMARK 500 12 LYS A 23 -145.50 -158.62 REMARK 500 12 GLN A 24 -50.60 -141.72 REMARK 500 12 ILE A 40 -164.22 -115.48 REMARK 500 12 ARG A 53 34.49 -174.35 REMARK 500 12 MET A 54 85.08 -55.81 REMARK 500 12 SER A 56 -50.89 -137.13 REMARK 500 13 GLU A -1 88.34 53.36 REMARK 500 13 LYS A 3 -74.22 -90.59 REMARK 500 13 LYS A 5 63.85 62.16 REMARK 500 13 SER A 9 -174.98 -63.09 REMARK 500 13 LYS A 23 -156.78 -169.07 REMARK 500 13 GLN A 24 -51.01 -134.56 REMARK 500 13 ILE A 40 -161.96 -106.50 REMARK 500 13 VAL A 45 -34.09 -35.90 REMARK 500 13 MET A 54 91.17 -48.39 REMARK 500 13 SER A 56 55.03 38.54 REMARK 500 14 GLU A -1 109.47 59.10 REMARK 500 14 SER A 6 -63.40 70.26 REMARK 500 14 SER A 7 -65.03 71.95 REMARK 500 14 SER A 9 -176.93 -56.35 REMARK 500 14 LYS A 23 -143.95 -167.80 REMARK 500 14 GLN A 24 -48.75 -145.82 REMARK 500 14 ILE A 40 -167.52 -106.61 REMARK 500 14 VAL A 45 -34.75 -36.70 REMARK 500 14 ARG A 53 29.67 -178.90 REMARK 500 14 MET A 54 84.52 -52.29 REMARK 500 15 LYS A -2 -174.40 60.05 REMARK 500 15 SER A 9 -176.51 -54.01 REMARK 500 15 LYS A 23 -147.91 -164.44 REMARK 500 15 GLN A 24 -48.53 -146.34 REMARK 500 15 ILE A 40 -164.04 -112.01 REMARK 500 15 VAL A 45 -36.40 -36.23 REMARK 500 15 ARG A 53 33.04 -178.34 REMARK 500 15 MET A 54 76.61 -58.71 REMARK 500 15 SER A 56 -55.44 -130.32 REMARK 500 16 LYS A 3 -70.37 67.37 REMARK 500 16 LYS A 5 -49.70 -159.97 REMARK 500 16 SER A 6 111.61 60.87 REMARK 500 16 SER A 9 -175.58 -54.99 REMARK 500 16 LYS A 23 -160.35 -164.22 REMARK 500 16 GLN A 24 -46.63 -141.99 REMARK 500 16 ILE A 40 -163.39 -105.77 REMARK 500 16 VAL A 45 -32.96 -35.82 REMARK 500 16 ARG A 53 37.20 -164.93 REMARK 500 16 MET A 54 73.96 -62.25 REMARK 500 17 GLU A -1 -69.12 -175.80 REMARK 500 17 SER A 1 63.66 60.37 REMARK 500 17 LYS A 5 84.95 60.82 REMARK 500 17 SER A 6 -82.98 58.53 REMARK 500 17 SER A 7 -70.91 171.14 REMARK 500 17 SER A 9 -175.67 -53.92 REMARK 500 17 LYS A 23 -145.18 -167.15 REMARK 500 17 GLN A 24 -50.25 -140.68 REMARK 500 17 ILE A 40 -163.89 -109.80 REMARK 500 17 VAL A 45 -32.75 -36.69 REMARK 500 17 ARG A 53 44.03 -145.04 REMARK 500 17 MET A 54 68.92 -62.49 REMARK 500 17 SER A 56 -89.34 36.40 REMARK 500 18 GLU A -1 -72.05 -158.92 REMARK 500 18 LYS A 0 104.49 60.65 REMARK 500 18 SER A 1 -61.24 -178.88 REMARK 500 18 PRO A 2 -165.69 -67.71 REMARK 500 18 LYS A 3 90.45 68.53 REMARK 500 18 SER A 9 -176.48 -53.42 REMARK 500 18 LYS A 23 -164.76 -160.01 REMARK 500 18 SER A 25 74.33 -102.89 REMARK 500 18 ILE A 40 -163.13 -110.80 REMARK 500 18 ARG A 53 32.49 -98.75 REMARK 500 18 MET A 54 86.57 -51.87 REMARK 500 19 LYS A -2 84.07 58.27 REMARK 500 19 GLU A -1 -60.78 -131.47 REMARK 500 19 SER A 1 153.31 68.93 REMARK 500 19 LYS A 5 73.74 60.84 REMARK 500 19 SER A 9 -174.08 -55.65 REMARK 500 19 LYS A 23 -149.30 -165.05 REMARK 500 19 GLN A 24 -49.07 -144.25 REMARK 500 19 ILE A 40 -163.65 -114.02 REMARK 500 19 VAL A 45 -31.31 -36.35 REMARK 500 19 MET A 54 85.28 -55.84 REMARK 500 19 SER A 56 105.07 -54.08 REMARK 500 20 GLU A -1 94.10 43.21 REMARK 500 20 LYS A 3 79.73 64.75 REMARK 500 20 LYS A 5 68.30 -167.41 REMARK 500 20 SER A 7 115.33 61.94 REMARK 500 20 SER A 9 -175.46 -52.86 REMARK 500 20 LYS A 23 -155.36 -153.15 REMARK 500 20 GLN A 24 -48.01 -140.31 REMARK 500 20 ILE A 40 -162.30 -109.26 REMARK 500 20 VAL A 45 -33.22 -36.12 REMARK 500 20 MET A 54 85.17 -55.01 REMARK 500 REMARK 500 REMARK: NULL
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1YRN RELATED DB: PDB REMARK 900 1YRN CONTAINS THE SAME PROTEIN COMPLEXED WITH MATALPHA2 REMARK 900 HOMEODOMAIN AND DNA
DBREF 1F43 A -3 57 UNP P01366 MATA1_YEAST 66 126
SEQRES 1 A 61 LYS LYS GLU LYS SER PRO LYS GLY LYS SER SER ILE SER SEQRES 2 A 61 PRO GLN ALA ARG ALA PHE LEU GLU GLN VAL PHE ARG ARG SEQRES 3 A 61 LYS GLN SER LEU ASN SER LYS GLU LYS GLU GLU VAL ALA SEQRES 4 A 61 LYS LYS CYS GLY ILE THR PRO LEU GLN VAL ARG VAL TRP SEQRES 5 A 61 PHE ILE ASN LYS ARG MET ARG SER LYS
HELIX 1 1 PRO A 10 LYS A 23 1 14 HELIX 2 2 ASN A 27 GLY A 39 1 13 HELIX 3 3 LEU A 43 LYS A 52 1 10
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000