1F2G - Header Asymmetric Unit

HEADER ELECTRON TRANSPORT 08-OCT-98 1F2G

TITLE THE NMR SOLUTION STRUCTURE OF THE 3FE FERREDOXIN II FROM TITLE 2 DESULFOVIBRIO GIGAS, 15 STRUCTURES

COMPND MOL_ID: 1; COMPND 2 MOLECULE: FERREDOXIN II; COMPND 3 CHAIN: A

SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DESULFOVIBRIO GIGAS; SOURCE 3 ORGANISM_TAXID: 879

KEYWDS ELECTRON TRANSPORT, FDII DESULFOVIBRIO GIGAS, FERREDOXIN II

EXPDTA SOLUTION NMR

NUMMDL 15

AUTHOR B.J.GOODFELLOW,A.L.MACEDO,P.RODRIGUES,V.WRAY,I.MOURA, AUTHOR 2 J.J.G.MOURA

REVDAT 3 24-FEB-09 1F2G 1 VERSN REVDAT 2 01-APR-03 1F2G 1 JRNL REVDAT 1 02-SEP-99 1F2G 0

JRNL AUTH B.J.GOODFELLOW,A.L.MACEDO,P.RODRIGUES,I.MOURA, JRNL AUTH 2 V.WRAY,J.J.MOURA JRNL TITL THE SOLUTION STRUCTURE OF A [3FE-4S] FERREDOXIN: JRNL TITL 2 OXIDISED FERREDOXIN II FROM DESULFOVIBRIO GIGAS. JRNL REF J.BIOL.INORG.CHEM. V. 4 421 1999 JRNL REFN ISSN 0949-8257 JRNL PMID 10555576 JRNL DOI 10.1007/S007750050328

REMARK 1

REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.

REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : DYANA REMARK 3 AUTHORS : GUNTERT,WUTHRICH REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL

REMARK 4 REMARK 4 1F2G COMPLIES WITH FORMAT V. 3.15, 01-DEC-08

REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL.

REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 300 REMARK 210 PH : 7.6 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 10% D2O/90% H2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : NOESY, COSY, TOCSY, 1D NOE REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : DMX600 REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : DYANA REMARK 210 METHOD USED : TORSION ANGLE DYANAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 2000 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 15 REMARK 210 CONFORMERS, SELECTION CRITERIA : LOWEST TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: NULL

REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.

REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASN A 5 -169.84 60.30 REMARK 500 1 MET A 9 -84.61 -108.64 REMARK 500 1 ALA A 10 59.56 168.00 REMARK 500 1 ASN A 25 -144.88 -60.89 REMARK 500 1 PRO A 36 35.09 -75.00 REMARK 500 1 ASP A 37 42.68 175.23 REMARK 500 1 SER A 38 -162.95 -58.93 REMARK 500 1 ASP A 39 32.94 -170.59 REMARK 500 1 GLU A 53 45.41 36.19 REMARK 500 1 ARG A 57 43.22 -87.74 REMARK 500 2 MET A 9 -68.06 -98.50 REMARK 500 2 ALA A 10 48.67 167.78 REMARK 500 2 ASN A 25 -155.71 -61.18 REMARK 500 2 PRO A 36 32.84 -74.93 REMARK 500 2 ASP A 37 40.65 177.26 REMARK 500 2 LEU A 40 -144.70 -85.99 REMARK 500 2 ASP A 41 13.38 -140.37 REMARK 500 2 GLU A 53 50.56 37.73 REMARK 500 2 ARG A 57 35.70 -90.31 REMARK 500 3 ASN A 5 -171.12 63.97 REMARK 500 3 CYS A 8 162.12 -47.98 REMARK 500 3 MET A 9 -77.36 -103.01 REMARK 500 3 ALA A 10 41.49 168.80 REMARK 500 3 GLU A 12 17.93 58.85 REMARK 500 3 ILE A 17 -43.66 -133.95 REMARK 500 3 MET A 24 153.10 -40.92 REMARK 500 3 ASN A 25 -150.85 -91.48 REMARK 500 3 GLU A 27 31.07 -154.56 REMARK 500 3 LYS A 30 109.20 -167.33 REMARK 500 3 ALA A 31 104.62 -48.75 REMARK 500 3 PRO A 36 37.58 -74.94 REMARK 500 3 ASP A 37 40.13 179.17 REMARK 500 3 SER A 38 -76.88 -83.43 REMARK 500 3 LEU A 40 44.16 -108.97 REMARK 500 3 ASP A 41 -51.35 79.49 REMARK 500 3 GLU A 53 38.45 38.22 REMARK 500 3 ARG A 57 48.87 -95.87 REMARK 500 4 GLU A 3 -156.13 -135.31 REMARK 500 4 VAL A 4 -104.66 -127.36 REMARK 500 4 ASN A 5 -171.04 178.01 REMARK 500 4 CYS A 8 162.36 -45.38 REMARK 500 4 MET A 9 -86.35 -106.69 REMARK 500 4 ALA A 10 61.17 166.50 REMARK 500 4 GLU A 16 41.40 -85.00 REMARK 500 4 ILE A 17 -40.66 -170.37 REMARK 500 4 MET A 24 163.04 -40.43 REMARK 500 4 ASN A 25 -149.18 -84.69 REMARK 500 4 GLU A 27 19.14 -152.17 REMARK 500 4 PRO A 36 26.25 -74.95 REMARK 500 4 ASP A 37 39.07 178.41 REMARK 500 4 SER A 38 -72.66 -36.49 REMARK 500 4 LEU A 40 -141.86 -66.87 REMARK 500 4 GLU A 53 37.02 38.43 REMARK 500 4 ARG A 57 40.48 -100.82 REMARK 500 5 ASN A 5 -169.71 62.12 REMARK 500 5 MET A 9 -85.05 -100.45 REMARK 500 5 ALA A 10 51.90 163.06 REMARK 500 5 ASN A 25 -150.26 -79.03 REMARK 500 5 ALA A 31 109.27 -57.41 REMARK 500 5 PRO A 36 37.36 -75.05 REMARK 500 5 ASP A 37 44.03 174.06 REMARK 500 5 SER A 38 -163.95 -58.43 REMARK 500 5 ASP A 39 32.91 -171.47 REMARK 500 5 GLU A 53 34.35 38.90 REMARK 500 6 ILE A 2 -172.00 -55.68 REMARK 500 6 ASN A 5 -170.98 46.02 REMARK 500 6 MET A 9 -92.68 -108.11 REMARK 500 6 ALA A 10 41.62 173.59 REMARK 500 6 ILE A 17 -46.55 -148.41 REMARK 500 6 MET A 24 142.12 -33.94 REMARK 500 6 ASN A 25 -156.31 -70.64 REMARK 500 6 ALA A 31 95.34 -68.61 REMARK 500 6 PRO A 36 28.56 -74.99 REMARK 500 6 ASP A 37 34.14 -172.73 REMARK 500 6 SER A 38 -95.91 -50.75 REMARK 500 6 ASP A 41 -37.12 87.11 REMARK 500 6 GLU A 53 45.76 34.17 REMARK 500 7 ASN A 5 -159.19 -119.94 REMARK 500 7 MET A 9 -93.52 -102.88 REMARK 500 7 ALA A 10 41.34 170.98 REMARK 500 7 GLU A 16 38.39 -83.93 REMARK 500 7 ILE A 17 -42.50 -165.88 REMARK 500 7 ASN A 25 -143.03 -60.83 REMARK 500 7 GLU A 27 11.70 -140.35 REMARK 500 7 ASN A 35 79.72 -117.41 REMARK 500 7 PRO A 36 39.09 -75.04 REMARK 500 7 ASP A 37 42.45 170.79 REMARK 500 7 SER A 38 -165.95 -69.77 REMARK 500 7 ASP A 39 33.69 -171.79 REMARK 500 7 GLU A 53 35.74 37.73 REMARK 500 7 ARG A 57 48.13 -104.99 REMARK 500 8 ILE A 2 -176.37 -55.46 REMARK 500 8 ASN A 5 -172.37 -53.83 REMARK 500 8 ASP A 7 -31.63 -39.07 REMARK 500 8 MET A 9 -82.94 -104.81 REMARK 500 8 ALA A 10 62.47 166.83 REMARK 500 8 CYS A 18 75.26 -151.10 REMARK 500 8 MET A 24 151.47 -35.32 REMARK 500 8 ASN A 25 -143.66 -63.64 REMARK 500 8 GLU A 27 15.38 -144.62 REMARK 500 8 PRO A 36 25.92 -74.91 REMARK 500 8 ASP A 37 38.77 -174.11 REMARK 500 8 SER A 38 -87.99 -31.03 REMARK 500 8 ASP A 39 24.87 81.61 REMARK 500 8 ASP A 41 49.14 -94.58 REMARK 500 8 GLU A 53 48.99 31.84 REMARK 500 9 ILE A 2 165.85 -44.17 REMARK 500 9 ASN A 5 -148.16 -91.95 REMARK 500 9 MET A 9 -70.62 -107.25 REMARK 500 9 ALA A 10 67.41 164.57 REMARK 500 9 MET A 24 151.81 -39.23 REMARK 500 9 ASN A 25 -147.09 -66.64 REMARK 500 9 GLU A 27 11.32 -142.06 REMARK 500 9 LYS A 30 104.81 -169.49 REMARK 500 9 PRO A 36 36.87 -74.95 REMARK 500 9 ASP A 37 41.19 170.97 REMARK 500 9 SER A 38 -167.52 -63.03 REMARK 500 9 ASP A 39 32.44 -171.22 REMARK 500 9 LEU A 40 -148.47 -97.28 REMARK 500 9 GLU A 53 34.02 36.65 REMARK 500 10 VAL A 4 -110.19 -130.62 REMARK 500 10 ASN A 5 -171.52 175.82 REMARK 500 10 MET A 9 -88.31 -100.54 REMARK 500 10 ALA A 10 41.85 174.14 REMARK 500 10 GLU A 12 17.97 59.36 REMARK 500 10 ASN A 25 -147.15 -61.94 REMARK 500 10 LYS A 30 133.01 -171.62 REMARK 500 10 PRO A 36 29.76 -74.99 REMARK 500 10 ASP A 37 48.53 -177.87 REMARK 500 10 SER A 38 -161.98 -59.12 REMARK 500 10 ASP A 39 32.11 -171.38 REMARK 500 10 LEU A 40 -169.07 -107.38 REMARK 500 10 GLU A 53 36.11 35.93 REMARK 500 11 ALA A 10 70.08 87.74 REMARK 500 11 GLU A 12 7.87 90.05 REMARK 500 11 CYS A 18 83.77 -160.54 REMARK 500 11 ASN A 25 -154.12 -59.75 REMARK 500 11 PRO A 36 24.63 -74.99 REMARK 500 11 ASP A 37 36.76 -175.72 REMARK 500 11 SER A 38 -77.59 -22.75 REMARK 500 11 ASP A 39 15.93 86.11 REMARK 500 11 GLU A 53 45.34 34.12 REMARK 500 11 ARG A 57 51.98 -104.12 REMARK 500 12 MET A 9 -70.94 -108.04 REMARK 500 12 ALA A 10 58.75 162.96 REMARK 500 12 GLU A 12 14.16 59.54 REMARK 500 12 ASN A 25 -157.12 -64.86 REMARK 500 12 ALA A 31 99.65 -68.24 REMARK 500 12 PRO A 36 40.10 -75.05 REMARK 500 12 ASP A 37 37.86 177.44 REMARK 500 12 SER A 38 -83.63 -58.72 REMARK 500 12 ASP A 41 -36.90 87.49 REMARK 500 12 GLU A 53 46.28 34.81 REMARK 500 12 ARG A 57 51.54 -104.68 REMARK 500 13 ASN A 5 -172.88 56.29 REMARK 500 13 MET A 9 -84.66 -102.83 REMARK 500 13 ALA A 10 59.84 162.45 REMARK 500 13 MET A 24 148.97 -37.74 REMARK 500 13 ASN A 25 -143.22 -60.60 REMARK 500 13 PRO A 36 38.75 -75.07 REMARK 500 13 ASP A 37 41.37 174.21 REMARK 500 13 SER A 38 -81.36 -82.31 REMARK 500 13 ASP A 41 2.54 90.71 REMARK 500 13 GLU A 53 45.87 32.98 REMARK 500 14 ALA A 10 65.79 90.88 REMARK 500 14 MET A 24 156.28 -38.04 REMARK 500 14 ASN A 25 -147.95 -75.21 REMARK 500 14 GLU A 27 15.44 -149.56 REMARK 500 14 LYS A 30 89.00 -169.23 REMARK 500 14 ALA A 31 121.78 -39.33 REMARK 500 14 PRO A 36 33.43 -74.98 REMARK 500 14 ASP A 37 42.24 171.24 REMARK 500 14 SER A 38 -169.15 -63.09 REMARK 500 14 ASP A 39 30.50 -167.61 REMARK 500 14 GLU A 53 45.73 35.58 REMARK 500 15 ILE A 2 -179.87 -50.60 REMARK 500 15 VAL A 4 -44.64 -136.32 REMARK 500 15 ASN A 5 -171.57 82.81 REMARK 500 15 MET A 9 -90.46 -98.86 REMARK 500 15 ALA A 10 50.30 162.27 REMARK 500 15 ASN A 25 -155.95 -67.46 REMARK 500 15 ASN A 35 79.09 -117.95 REMARK 500 15 PRO A 36 38.39 -74.97 REMARK 500 15 ASP A 37 43.36 172.55 REMARK 500 15 SER A 38 -164.23 -65.97 REMARK 500 15 ASP A 39 33.54 -171.48 REMARK 500 15 GLU A 53 45.86 34.51 REMARK 500 REMARK 500 REMARK: NULL

REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE F3S A 59

DBREF 1F2G A 1 58 UNP P00209 FER_DESGI 1 58

SEQRES 1 A 58 PRO ILE GLU VAL ASN ASP ASP CYS MET ALA CYS GLU ALA SEQRES 2 A 58 CYS VAL GLU ILE CYS PRO ASP VAL PHE GLU MET ASN GLU SEQRES 3 A 58 GLU GLY ASP LYS ALA VAL VAL ILE ASN PRO ASP SER ASP SEQRES 4 A 58 LEU ASP CYS VAL GLU GLU ALA ILE ASP SER CYS PRO ALA SEQRES 5 A 58 GLU ALA ILE VAL ARG SER

HET F3S A 59 7

HETNAM F3S FE3-S4 CLUSTER

FORMUL 2 F3S FE3 S4

HELIX 1 1 ALA A 13 ILE A 17 1 5 HELIX 2 2 ASP A 41 ASP A 48 5 8

SHEET 1 A 2 PHE A 22 MET A 24 0 SHEET 2 A 2 ALA A 31 VAL A 33 -1 N VAL A 32 O GLU A 23

SSBOND 1 CYS A 18 CYS A 42 1555 1555 2.08

LINK FE1 F3S A 59 SG CYS A 8 1555 1555 2.30 LINK FE3 F3S A 59 SG CYS A 50 1555 1555 2.30 LINK SG CYS A 14 FE4 F3S A 59 1555 1555 2.30

SITE 1 AC1 9 VAL A 4 CYS A 8 CYS A 11 GLU A 12 SITE 2 AC1 9 ALA A 13 CYS A 14 ALA A 31 CYS A 50 SITE 3 AC1 9 ILE A 55

CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1

ORIGX1 1.000000 0.000000 0.000000 0.00000

ORIGX2 0.000000 1.000000 0.000000 0.00000

ORIGX3 0.000000 0.000000 1.000000 0.00000

SCALE1 1.000000 0.000000 0.000000 0.00000

SCALE2 0.000000 1.000000 0.000000 0.00000

SCALE3 0.000000 0.000000 1.000000 0.00000