10 20 30 40 50 60 70 80 1F0D - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER ANTIMICROBIAL PROTEIN 16-MAY-00 1F0D
TITLE CECROPIN A(1-8)-MAGAININ 2(1-12) IN DODECYLPHOSPHOCHOLINE TITLE 2 MICELLES
COMPND MOL_ID: 1; COMPND 2 MOLECULE: CECROPIN A-MAGAININ 2 HYBRID PEPTIDE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 OTHER_DETAILS: THIS PEPTIDE WAS CHEMICALLY SYNTHESIZED. SOURCE 4 THE SEQUENCE FOR THIS PEPTIDE IS A HYBRID OF SEQUENCES SOURCE 5 WHICH OCCUR NATURALLY IN HYALOPHORA CECROPIA (CECROPIA SOURCE 6 MOTH) AND XENOPUS LAEVIS (AFRICAN CLAWED FROG)
KEYWDS HELIX-TURN-HELIX, ANTIMICROBIAL PROTEIN
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR D.OH,S.Y.SHIN,S.LEE,Y.KIM
REVDAT 4 24-FEB-09 1F0D 1 VERSN REVDAT 3 31-MAY-05 1F0D 1 JRNL REVDAT 2 24-FEB-04 1F0D 1 CRYST1 REVDAT 1 14-JUN-00 1F0D 0
JRNL AUTH D.OH,S.Y.SHIN,S.LEE,J.H.KANG,S.D.KIM,P.D.RYU, JRNL AUTH 2 K.S.HAHM,Y.KIM JRNL TITL ROLE OF THE HINGE REGION AND THE TRYPTOPHAN JRNL TITL 2 RESIDUE IN THE SYNTHETIC ANTIMICROBIAL PEPTIDES, JRNL TITL 3 CECROPIN A(1-8)-MAGAININ 2(1-12) AND ITS JRNL TITL 4 ANALOGUES, ON THEIR ANTIBIOTIC ACTIVITIES AND JRNL TITL 5 STRUCTURES. JRNL REF BIOCHEMISTRY V. 39 11855 2000 JRNL REFN ISSN 0006-2960 JRNL PMID 11009597 JRNL DOI 10.1021/BI000453G
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.851 REMARK 3 AUTHORS : BRUNGER, A.T. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 1F0D COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-MAY-00. REMARK 100 THE RCSB ID CODE IS RCSB011089.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 4.06 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : NULL REMARK 210 SAMPLE CONTENTS : DODECYLPHOSPHOCHOLINE-D38 REMARK 210 MICELLES REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 400 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : DISTANCE GEOMETRY-DYNAMICAL REMARK 210 SIMULATED ANNEALING HYBRID REMARK 210 METHOD REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 50 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 TRP A 2 -166.74 -173.88 REMARK 500 1 LYS A 3 45.50 -85.50 REMARK 500 1 LYS A 7 35.78 -156.56 REMARK 500 2 LEU A 4 -80.14 -74.13 REMARK 500 2 ILE A 10 -47.86 -164.61 REMARK 500 3 LYS A 3 45.42 -85.49 REMARK 500 3 LEU A 4 -77.87 -83.70 REMARK 500 3 LYS A 7 16.47 -148.94 REMARK 500 4 LYS A 3 44.42 -76.55 REMARK 500 4 ILE A 10 -42.42 -156.62 REMARK 500 6 TRP A 2 -162.28 -119.07 REMARK 500 6 LYS A 3 37.72 -84.17 REMARK 500 6 ILE A 10 -46.40 -142.18 REMARK 500 7 TRP A 2 -162.79 174.67 REMARK 500 7 LYS A 3 42.61 -83.57 REMARK 500 7 ILE A 10 -41.39 -152.34 REMARK 500 8 TRP A 2 -158.02 -152.49 REMARK 500 8 LYS A 3 44.50 -85.50 REMARK 500 8 ILE A 10 -40.80 -135.07 REMARK 500 9 ILE A 10 -42.73 -162.18 REMARK 500 10 TRP A 2 -178.87 -172.95 REMARK 500 10 LYS A 3 -84.85 -56.14 REMARK 500 10 LEU A 4 -27.78 -38.73 REMARK 500 11 LYS A 7 21.75 -146.95 REMARK 500 11 ILE A 10 -42.84 -164.89 REMARK 500 12 LYS A 3 46.70 -85.03 REMARK 500 12 ILE A 10 -44.61 -149.98 REMARK 500 13 TRP A 2 -165.55 -101.39 REMARK 500 13 LYS A 3 47.92 -81.67 REMARK 500 13 LYS A 7 28.71 -151.06 REMARK 500 14 LYS A 7 43.82 -160.15 REMARK 500 15 TRP A 2 -156.68 -127.99 REMARK 500 15 LEU A 4 -79.52 -64.48 REMARK 500 16 TRP A 2 162.22 -42.26 REMARK 500 16 LEU A 4 -73.08 -68.61 REMARK 500 16 ILE A 10 -41.82 -158.35 REMARK 500 17 TRP A 2 -174.52 -170.10 REMARK 500 17 LYS A 3 39.42 -85.29 REMARK 500 18 TRP A 2 -165.40 -118.61 REMARK 500 18 LYS A 3 45.78 -81.85 REMARK 500 18 LYS A 7 30.62 -144.64 REMARK 500 18 ILE A 10 -37.94 -150.14 REMARK 500 19 LYS A 7 49.34 -160.34 REMARK 500 19 ILE A 10 -42.71 -159.98 REMARK 500 20 LYS A 7 25.64 -155.85 REMARK 500 REMARK 500 REMARK: NULL
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NH2 A 21
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1D9J RELATED DB: PDB REMARK 900 RELATED ID: 1D9L RELATED DB: PDB REMARK 900 RELATED ID: 1D9M RELATED DB: PDB REMARK 900 RELATED ID: 1D9O RELATED DB: PDB REMARK 900 RELATED ID: 1D9P RELATED DB: PDB REMARK 900 RELATED ID: 1F0E RELATED DB: PDB REMARK 900 RELATED ID: 1F0F RELATED DB: PDB REMARK 900 RELATED ID: 1F0G RELATED DB: PDB REMARK 900 RELATED ID: 1F0H RELATED DB: PDB
DBREF 1F0D A 1 8 UNP P01507 CECA_HYACE 27 34 DBREF 1F0D A 9 20 UNP P11006 MAGA_XENLA 83 94
SEQRES 1 A 21 LYS TRP LYS LEU PHE LYS LYS ILE GLY ILE GLY LYS PHE SEQRES 2 A 21 LEU HIS SER ALA LYS LYS PHE NH2
HET NH2 A 21 3
HETNAM NH2 AMINO GROUP
FORMUL 1 NH2 H2 N
HELIX 1 1 ILE A 8 LYS A 18 1 11
LINK C PHE A 20 N NH2 A 21 1555 1555 1.31
SITE 1 AC1 1 PHE A 20
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000